RNA–Protein interactions for RNA: ENSMUST00000023426.11

Cldnd1-201, Transcript of Claudin domain-containing protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cldnd1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1-201ENSMUST00000023426 Nhlrc1Q8BR37 401 aa17.56■□□□□ 0.4
Cldnd1-201ENSMUST00000023426 Trav9d-3A0A075B695 113 aa17.55■□□□□ 0.4
Cldnd1-201ENSMUST00000023426 BC048562Q80ZQ7 204 aa17.55■□□□□ 0.4
Cldnd1-201ENSMUST00000023426 Notch3Q61982 2318 aa17.55■□□□□ 0.4
Cldnd1-201ENSMUST00000023426 Spink1P09036 80 aa17.54■□□□□ 0.4
Cldnd1-201ENSMUST00000023426 4930415O20RikQ8CDT5 131 aa17.54■□□□□ 0.4
Cldnd1-201ENSMUST00000023426 9430069I07RikQ9CX21 111 aa17.54■□□□□ 0.4
Cldnd1-201ENSMUST00000023426 4930546C10RikE9Q4Y3 121 aa17.53■□□□□ 0.4
Cldnd1-201ENSMUST00000023426 Gm10135F6TEE5 83 aa17.53■□□□□ 0.4
Cldnd1-201ENSMUST00000023426 Cops9Q3U898 57 aa17.53■□□□□ 0.4
Cldnd1-201ENSMUST00000023426 Myo9aQ8C170 2542 aa17.53■□□□□ 0.4
Cldnd1-201ENSMUST00000023426 Gm12057A0A087WR21 115 aa17.53■□□□□ 0.4
Cldnd1-201ENSMUST00000023426 BatfO35284 125 aa17.53■□□□□ 0.4
Cldnd1-201ENSMUST00000023426 Lgals4Q8K419 326 aa17.53■□□□□ 0.4
Cldnd1-201ENSMUST00000023426 Krtap16-1A2A5X5 502 aa17.51■□□□□ 0.39
Cldnd1-201ENSMUST00000023426 Gm28269A0A087WSG3 125 aa17.51■□□□□ 0.39
Cldnd1-201ENSMUST00000023426 Insl3O09107 122 aa17.51■□□□□ 0.39
Cldnd1-201ENSMUST00000023426 P01745 121 aa17.51■□□□□ 0.39
Cldnd1-201ENSMUST00000023426 TrrapQ80YV3 2565 aaKnown RBP17.51■□□□□ 0.39
Cldnd1-201ENSMUST00000023426 Gm10772F7AIG4 85 aa17.5■□□□□ 0.39
Cldnd1-201ENSMUST00000023426 Gm43218A0A0G2JGT0 114 aa17.5■□□□□ 0.39
Cldnd1-201ENSMUST00000023426 Krtap24-1G3X9A2 248 aa17.5■□□□□ 0.39
Cldnd1-201ENSMUST00000023426 Cox6b1P56391 86 aaKnown RBP17.5■□□□□ 0.39
Cldnd1-201ENSMUST00000023426 Zc2hc1bQ9D534 172 aa17.49■□□□□ 0.39
Cldnd1-201ENSMUST00000023426 Ighv1-49A0A0A6YWX2 117 aa17.48■□□□□ 0.39
Cldnd1-201ENSMUST00000023426 CubnQ9JLB4 3623 aa17.47■□□□□ 0.39
Cldnd1-201ENSMUST00000023426 Hivep2Q3UHF7 2430 aa17.47■□□□□ 0.39
Cldnd1-201ENSMUST00000023426 Chd9Q8BYH8 2885 aa17.46■□□□□ 0.39
Cldnd1-201ENSMUST00000023426 SbsponQ3UPR9 264 aa17.46■□□□□ 0.39
Cldnd1-201ENSMUST00000023426 Cdip1Q9DB75 208 aa17.46■□□□□ 0.39
Cldnd1-201ENSMUST00000023426 Wnk1P83741 2377 aa17.46■□□□□ 0.39
Cldnd1-201ENSMUST00000023426 Igkv4-72A0A0B4J1I4 117 aa17.45■□□□□ 0.38
Cldnd1-201ENSMUST00000023426 CenpwQ3URR0 86 aa17.45■□□□□ 0.38
Cldnd1-201ENSMUST00000023426 Cox7a1P56392 80 aa17.45■□□□□ 0.38
Cldnd1-201ENSMUST00000023426 Epg5Q80TA9 2572 aa17.45■□□□□ 0.38
Cldnd1-201ENSMUST00000023426 Trav13n-1A0A0G2JEU8 110 aa17.44■□□□□ 0.38
Cldnd1-201ENSMUST00000023426 Spink4O35679 86 aa17.44■□□□□ 0.38
Cldnd1-201ENSMUST00000023426 Gm10577Q3UDV9 132 aa17.44■□□□□ 0.38
Cldnd1-201ENSMUST00000023426 Cox6cQ9CPQ1 76 aa17.44■□□□□ 0.38
Cldnd1-201ENSMUST00000023426 MobpQ9D2P8 170 aa17.44■□□□□ 0.38
Cldnd1-201ENSMUST00000023426 Usp9yF8VPU6 2556 aa17.44■□□□□ 0.38
Cldnd1-201ENSMUST00000023426 Ppp1r32Q148A4 427 aa17.44■□□□□ 0.38
Cldnd1-201ENSMUST00000023426 MtorQ9JLN9 2549 aa17.43■□□□□ 0.38
Cldnd1-201ENSMUST00000023426 Gm29423A0A087WRM1 55 aa17.43■□□□□ 0.38
Cldnd1-201ENSMUST00000023426 Pla2g1bQ9Z0Y2 146 aa17.43■□□□□ 0.38
Cldnd1-201ENSMUST00000023426 Cep192E9Q4Y4 2514 aaKnown RBP17.42■□□□□ 0.38
Cldnd1-201ENSMUST00000023426 Gm11444F6QMA6 170 aa17.42■□□□□ 0.38
Cldnd1-201ENSMUST00000023426 RetnQ99P87 114 aa17.42■□□□□ 0.38
Cldnd1-201ENSMUST00000023426 Xirp2Q4U4S6 3784 aa17.42■□□□□ 0.38
Cldnd1-201ENSMUST00000023426 Gm11020F6ZGD5 61 aa17.39■□□□□ 0.37
Cldnd1-201ENSMUST00000023426 Sostdc1Q9CQN4 206 aa17.38■□□□□ 0.37
Cldnd1-201ENSMUST00000023426 Ss18l2Q9D174 77 aa17.38■□□□□ 0.37
Cldnd1-201ENSMUST00000023426 Cmc4Q61908 68 aa17.38■□□□□ 0.37
Cldnd1-201ENSMUST00000023426 Q9DAQ5 155 aa17.37■□□□□ 0.37
Cldnd1-201ENSMUST00000023426 Sh2d1aO88890 126 aa17.36■□□□□ 0.37
Cldnd1-201ENSMUST00000023426 NipblQ6KCD5 2798 aaKnown RBP17.36■□□□□ 0.37
Cldnd1-201ENSMUST00000023426 Zfp462B1AWL2 2495 aaKnown RBP17.36■□□□□ 0.37
Cldnd1-201ENSMUST00000023426 Trav11A0A0B4J1J9 114 aa17.35■□□□□ 0.37
Cldnd1-201ENSMUST00000023426 Gm7257D3YX25 99 aa17.35■□□□□ 0.37
Cldnd1-201ENSMUST00000023426 Eif4ebp3Q80VV3 101 aa17.35■□□□□ 0.37
Cldnd1-201ENSMUST00000023426 Phpt1Q9DAK9 124 aa17.35■□□□□ 0.37
Cldnd1-201ENSMUST00000023426 1700011M02RikB1AX35 88 aa17.35■□□□□ 0.37
Cldnd1-201ENSMUST00000023426 Psors1c2Q80ZC9 134 aa17.35■□□□□ 0.37
Cldnd1-201ENSMUST00000023426 Lage3Q9CR70 148 aa17.35■□□□□ 0.37
Cldnd1-201ENSMUST00000023426 Zfand2aQ9JII7 171 aa17.35■□□□□ 0.37
Cldnd1-201ENSMUST00000023426 Trav13-4-dv7A0A075B6C2 110 aa17.34■□□□□ 0.37
Cldnd1-201ENSMUST00000023426 Lst1O08843 95 aa17.34■□□□□ 0.37
Cldnd1-201ENSMUST00000023426 Scgb1b24B1B0N6 92 aa17.33■□□□□ 0.37
Cldnd1-201ENSMUST00000023426 Klk9Q32M27 251 aa17.33■□□□□ 0.36
Cldnd1-201ENSMUST00000023426 Ly6hQ9WUC3 139 aa17.33■□□□□ 0.36
Cldnd1-201ENSMUST00000023426 Smrp1Q2MH31 260 aa17.3■□□□□ 0.36
Cldnd1-201ENSMUST00000023426 Ube2wQ8VDW4 151 aa17.3■□□□□ 0.36
Cldnd1-201ENSMUST00000023426 Cryba4Q9JJV0 196 aa17.3■□□□□ 0.36
Cldnd1-201ENSMUST00000023426 Zfp951A0A087WRH0 451 aa17.3■□□□□ 0.36
Cldnd1-201ENSMUST00000023426 Q8R092 253 aa17.3■□□□□ 0.36
Cldnd1-201ENSMUST00000023426 Helz2E9QAM5 2947 aaKnown RBP17.3■□□□□ 0.36
Cldnd1-201ENSMUST00000023426 Igkv4-61A0A0G2JH00 117 aa17.29■□□□□ 0.36
Cldnd1-201ENSMUST00000023426 MalO09198 153 aa17.29■□□□□ 0.36
Cldnd1-201ENSMUST00000023426 Gm10549Q3URY4 149 aa17.29■□□□□ 0.36
Cldnd1-201ENSMUST00000023426 Tomm7Q9D173 55 aa17.29■□□□□ 0.36
Cldnd1-201ENSMUST00000023426 Igfn1Q3KNY0 2849 aa17.29■□□□□ 0.36
Cldnd1-201ENSMUST00000023426 C2cd3Q52KB6 2323 aa17.29■□□□□ 0.36
Cldnd1-201ENSMUST00000023426 Trav9d-4A0A0G2JG37 103 aa17.29■□□□□ 0.36
Cldnd1-201ENSMUST00000023426 Atp5g3P56384 141 aa17.28■□□□□ 0.36
Cldnd1-201ENSMUST00000023426 Odf3l2Q3TZ65 277 aa17.27■□□□□ 0.36
Cldnd1-201ENSMUST00000023426 Defb50Q6TU36 73 aa17.27■□□□□ 0.36
Cldnd1-201ENSMUST00000023426 Ighv1-59A0A0A6YXE0 117 aa17.27■□□□□ 0.35
Cldnd1-201ENSMUST00000023426 Prp2P05143 317 aa17.27■□□□□ 0.35
Cldnd1-201ENSMUST00000023426 SelenowP63300 88 aa17.27■□□□□ 0.35
Cldnd1-201ENSMUST00000023426 Trav7-6A0A075B640 112 aa17.26■□□□□ 0.35
Cldnd1-201ENSMUST00000023426 Igkv4-54A0A0G2JES9 117 aa17.26■□□□□ 0.35
Cldnd1-201ENSMUST00000023426 Tm2d2Q8R0I4 213 aa17.26■□□□□ 0.35
Cldnd1-201ENSMUST00000023426 Tmem223Q9CQE2 199 aaKnown RBP17.26■□□□□ 0.35
Cldnd1-201ENSMUST00000023426 CrygfQ9CXV3 174 aa17.26■□□□□ 0.35
Cldnd1-201ENSMUST00000023426 Igkv4-53A0A0G2JFC6 119 aa17.25■□□□□ 0.35
Cldnd1-201ENSMUST00000023426 1700020N15RikL7MTX3 112 aa17.25■□□□□ 0.35
Cldnd1-201ENSMUST00000023426 Gm4861Q8C5A4 106 aa17.25■□□□□ 0.35
Cldnd1-201ENSMUST00000023426 Spata45Q9CVW4 97 aa17.25■□□□□ 0.35
Cldnd1-201ENSMUST00000023426 Atp5g1Q9CR84 136 aa17.24■□□□□ 0.35
Cldnd1-201ENSMUST00000023426 SpinklQ8CEK3 90 aa17.24■□□□□ 0.35
Retrieved 100 of 22,080 RNA–protein pairs in 31.4 ms