Protein–RNA interactions for Protein: Q4U4S6

Xirp2, Xin actin-binding repeat-containing protein 2, mousemouse

Predictions only

Length 3,784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xirp2Q4U4S6 Gm25239-201ENSMUST00000174915 86 ntBASIC30,8■■■□□ 2,52
Xirp2Q4U4S6 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC28,54■■■□□ 2,16
Xirp2Q4U4S6 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC27,99■■■□□ 2,07
Xirp2Q4U4S6 Gm24109-201ENSMUST00000175489 103 ntBASIC27,09■■□□□ 1,93
Xirp2Q4U4S6 Gm15042-201ENSMUST00000120212 883 ntBASIC26,36■■□□□ 1,81
Xirp2Q4U4S6 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC26,13■■□□□ 1,77
Xirp2Q4U4S6 Gm15045-201ENSMUST00000117359 883 ntBASIC26■■□□□ 1,75
Xirp2Q4U4S6 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1,75
Xirp2Q4U4S6 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC25,72■■□□□ 1,71
Xirp2Q4U4S6 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC25,58■■□□□ 1,69
Xirp2Q4U4S6 Gm23366-201ENSMUST00000175022 89 ntBASIC25,44■■□□□ 1,66
Xirp2Q4U4S6 AC153911.1-202ENSMUST00000218534 1034 ntBASIC25,19■■□□□ 1,62
Xirp2Q4U4S6 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC25,17■■□□□ 1,62
Xirp2Q4U4S6 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC25,13■■□□□ 1,61
Xirp2Q4U4S6 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC24,97■■□□□ 1,59
Xirp2Q4U4S6 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC24,88■■□□□ 1,57
Xirp2Q4U4S6 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC24,82■■□□□ 1,56
Xirp2Q4U4S6 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC24,77■■□□□ 1,56
Xirp2Q4U4S6 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC24,64■■□□□ 1,54
Xirp2Q4U4S6 Gm25238-201ENSMUST00000174914 89 ntBASIC24,55■■□□□ 1,52
Xirp2Q4U4S6 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC24,51■■□□□ 1,51
Xirp2Q4U4S6 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC24,5■■□□□ 1,51
Xirp2Q4U4S6 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC24,45■■□□□ 1,5
Xirp2Q4U4S6 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC24,39■■□□□ 1,5
Xirp2Q4U4S6 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC24,02■■□□□ 1,44
Xirp2Q4U4S6 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC23,99■■□□□ 1,43
Xirp2Q4U4S6 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC23,96■■□□□ 1,43
Xirp2Q4U4S6 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC23,92■■□□□ 1,42
Xirp2Q4U4S6 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC23,86■■□□□ 1,41
Xirp2Q4U4S6 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC23,86■■□□□ 1,41
Xirp2Q4U4S6 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC23,8■■□□□ 1,4
Xirp2Q4U4S6 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC23,76■■□□□ 1,39
Xirp2Q4U4S6 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC23,75■■□□□ 1,39
Xirp2Q4U4S6 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC23,73■■□□□ 1,39
Xirp2Q4U4S6 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC23,72■■□□□ 1,39
Xirp2Q4U4S6 Gm25262-201ENSMUST00000174934 133 ntBASIC23,69■■□□□ 1,38
Xirp2Q4U4S6 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC23,58■■□□□ 1,37
Xirp2Q4U4S6 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC23,55■■□□□ 1,36
Xirp2Q4U4S6 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC23,49■■□□□ 1,35
Xirp2Q4U4S6 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC23,48■■□□□ 1,35
Xirp2Q4U4S6 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC23,32■■□□□ 1,32
Xirp2Q4U4S6 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC23,27■■□□□ 1,32
Xirp2Q4U4S6 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC23,26■■□□□ 1,31
Xirp2Q4U4S6 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC23,25■■□□□ 1,31
Xirp2Q4U4S6 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC23,21■■□□□ 1,31
Xirp2Q4U4S6 Gm27325-201ENSMUST00000175467 74 ntBASIC23,2■■□□□ 1,31
Xirp2Q4U4S6 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC23,15■■□□□ 1,3
Xirp2Q4U4S6 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC23,1■■□□□ 1,29
Xirp2Q4U4S6 Gm26115-201ENSMUST00000175605 87 ntBASIC23,1■■□□□ 1,29
Xirp2Q4U4S6 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC23,09■■□□□ 1,29
Xirp2Q4U4S6 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC23,06■■□□□ 1,28
Xirp2Q4U4S6 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC23,05■■□□□ 1,28
Xirp2Q4U4S6 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC23,03■■□□□ 1,28
Xirp2Q4U4S6 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC23,03■■□□□ 1,28
Xirp2Q4U4S6 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC22,98■■□□□ 1,27
Xirp2Q4U4S6 Psd-208ENSMUST00000224556 2034 ntBASIC22,95■■□□□ 1,27
Xirp2Q4U4S6 Rab21-202ENSMUST00000218831 843 ntBASIC22,93■■□□□ 1,26
Xirp2Q4U4S6 Gm8109-201ENSMUST00000194076 746 ntBASIC22,88■■□□□ 1,25
Xirp2Q4U4S6 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC22,8■■□□□ 1,24
Xirp2Q4U4S6 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC22,79■■□□□ 1,24
Xirp2Q4U4S6 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC22,77■■□□□ 1,24
Xirp2Q4U4S6 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC22,75■■□□□ 1,23
Xirp2Q4U4S6 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC22,72■■□□□ 1,23
Xirp2Q4U4S6 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC22,72■■□□□ 1,23
Xirp2Q4U4S6 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC22,7■■□□□ 1,22
Xirp2Q4U4S6 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC22,67■■□□□ 1,22
Xirp2Q4U4S6 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC22,67■■□□□ 1,22
Xirp2Q4U4S6 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC22,66■■□□□ 1,22
Xirp2Q4U4S6 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC22,64■■□□□ 1,22
Xirp2Q4U4S6 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC22,62■■□□□ 1,21
Xirp2Q4U4S6 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC22,54■■□□□ 1,2
Xirp2Q4U4S6 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC22,52■■□□□ 1,2
Xirp2Q4U4S6 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC22,47■■□□□ 1,19
Xirp2Q4U4S6 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC22,43■■□□□ 1,18
Xirp2Q4U4S6 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC22,37■■□□□ 1,17
Xirp2Q4U4S6 Gm24804-201ENSMUST00000174982 85 ntBASIC22,37■■□□□ 1,17
Xirp2Q4U4S6 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC22,3■■□□□ 1,16
Xirp2Q4U4S6 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC22,28■■□□□ 1,16
Xirp2Q4U4S6 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC22,27■■□□□ 1,16
Xirp2Q4U4S6 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC22,26■■□□□ 1,15
Xirp2Q4U4S6 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC22,25■■□□□ 1,15
Xirp2Q4U4S6 Gm17082-201ENSMUST00000166043 1091 ntBASIC22,25■■□□□ 1,15
Xirp2Q4U4S6 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC22,22■■□□□ 1,15
Xirp2Q4U4S6 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC22,2■■□□□ 1,14
Xirp2Q4U4S6 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC22,19■■□□□ 1,14
Xirp2Q4U4S6 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC22,15■■□□□ 1,14
Xirp2Q4U4S6 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC22,14■■□□□ 1,13
Xirp2Q4U4S6 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC22,13■■□□□ 1,13
Xirp2Q4U4S6 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC22,1■■□□□ 1,13
Xirp2Q4U4S6 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC22,06■■□□□ 1,12
Xirp2Q4U4S6 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC22,05■■□□□ 1,12
Xirp2Q4U4S6 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC22,04■■□□□ 1,12
Xirp2Q4U4S6 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC22,04■■□□□ 1,12
Xirp2Q4U4S6 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC22,03■■□□□ 1,12
Xirp2Q4U4S6 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC22,03■■□□□ 1,12
Xirp2Q4U4S6 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC22,02■■□□□ 1,12
Xirp2Q4U4S6 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC22,01■■□□□ 1,11
Xirp2Q4U4S6 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC21,99■■□□□ 1,11
Xirp2Q4U4S6 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC21,99■■□□□ 1,11
Xirp2Q4U4S6 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC21,99■■□□□ 1,11
Retrieved 100 of 76,532 protein–RNA pairs in 11,7 ms