RNA–Protein interactions for RNA: ENSMUST00000193901.5

Pcdh9-204, Transcript of Protocadherin 9, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Pcdh9, Length 6,127 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9-204ENSMUST00000193901 Ndufa4l2Q4FZG9 87 aa5.85□□□□□ -1.47
Pcdh9-204ENSMUST00000193901 Pi4kaE9Q3L2 2105 aa5.85□□□□□ -1.47
Pcdh9-204ENSMUST00000193901 Triap1Q9D8Z2 76 aa5.85□□□□□ -1.47
Pcdh9-204ENSMUST00000193901 Cep250Q60952 2414 aa5.84□□□□□ -1.47
Pcdh9-204ENSMUST00000193901 Sh2d1aO88890 126 aa5.84□□□□□ -1.47
Pcdh9-204ENSMUST00000193901 Scn1aA2APX8 2009 aa5.84□□□□□ -1.47
Pcdh9-204ENSMUST00000193901 Lrrk1Q3UHC2 2014 aa5.84□□□□□ -1.47
Pcdh9-204ENSMUST00000193901 P84751 237 aa5.84□□□□□ -1.47
Pcdh9-204ENSMUST00000193901 Tnfrsf13bQ9ET35 249 aa5.84□□□□□ -1.47
Pcdh9-204ENSMUST00000193901 Cabin1G3X8Q1 2187 aaKnown RBP5.84□□□□□ -1.47
Pcdh9-204ENSMUST00000193901 Defb40Q70KL2 73 aa5.84□□□□□ -1.47
Pcdh9-204ENSMUST00000193901 Scn2aA0A0J9YTW6 2006 aa5.84□□□□□ -1.47
Pcdh9-204ENSMUST00000193901 Ankrd12G5E893 2041 aa5.84□□□□□ -1.47
Pcdh9-204ENSMUST00000193901 Ighv2-7A0A075B5Q8 116 aa5.84□□□□□ -1.48
Pcdh9-204ENSMUST00000193901 Rnase1P00683 149 aa5.84□□□□□ -1.48
Pcdh9-204ENSMUST00000193901 Snai3Q9QY31 287 aa5.84□□□□□ -1.48
Pcdh9-204ENSMUST00000193901 FshbQ60687 130 aa5.83□□□□□ -1.48
Pcdh9-204ENSMUST00000193901 Zgrf1Q0VGT4 1863 aa5.83□□□□□ -1.48
Pcdh9-204ENSMUST00000193901 SprnQ8BWU1 147 aa5.83□□□□□ -1.48
Pcdh9-204ENSMUST00000193901 TprF6ZDS4 2431 aaKnown RBP5.83□□□□□ -1.48
Pcdh9-204ENSMUST00000193901 Dkk4Q8VEJ3 221 aa5.83□□□□□ -1.48
Pcdh9-204ENSMUST00000193901 Nup214Q80U93 2085 aa5.83□□□□□ -1.48
Pcdh9-204ENSMUST00000193901 Gm10267M0QWD8 85 aa5.83□□□□□ -1.48
Pcdh9-204ENSMUST00000193901 Zfp36P22893 319 aaKnown RBP5.83□□□□□ -1.48
Pcdh9-204ENSMUST00000193901 Ighv8-5A0A0A6YY60 119 aa5.83□□□□□ -1.48
Pcdh9-204ENSMUST00000193901 E130114P18RikF6S0S7 154 aa5.83□□□□□ -1.48
Pcdh9-204ENSMUST00000193901 Limd2Q8BGB5 128 aa5.83□□□□□ -1.48
Pcdh9-204ENSMUST00000193901 Ovol3D3YYM0 189 aa5.82□□□□□ -1.48
Pcdh9-204ENSMUST00000193901 CrygeQ03740 174 aa5.82□□□□□ -1.48
Pcdh9-204ENSMUST00000193901 CrygfQ9CXV3 174 aa5.82□□□□□ -1.48
Pcdh9-204ENSMUST00000193901 1810032O08RikE9PZV8 113 aa5.82□□□□□ -1.48
Pcdh9-204ENSMUST00000193901 P01747 120 aa5.82□□□□□ -1.48
Pcdh9-204ENSMUST00000193901 P01728 117 aa5.82□□□□□ -1.48
Pcdh9-204ENSMUST00000193901 Col8a2P25318 699 aa5.82□□□□□ -1.48
Pcdh9-204ENSMUST00000193901 Fgfbp3Q1HCM0 245 aa5.82□□□□□ -1.48
Pcdh9-204ENSMUST00000193901 Dazap2Q9DCP9 168 aa5.82□□□□□ -1.48
Pcdh9-204ENSMUST00000193901 CrebbpP45481 2441 aa5.82□□□□□ -1.48
Pcdh9-204ENSMUST00000193901 Nupr2Q497P3 102 aa5.82□□□□□ -1.48
Pcdh9-204ENSMUST00000193901 RetnlbQ99P86 105 aa5.82□□□□□ -1.48
Pcdh9-204ENSMUST00000193901 Ighv1-75A0A075B5Y2 117 aa5.82□□□□□ -1.48
Pcdh9-204ENSMUST00000193901 Ifitm6A0A1B0GS75 124 aa5.82□□□□□ -1.48
Pcdh9-204ENSMUST00000193901 Bean1Q9EQG5 255 aa5.82□□□□□ -1.48
Pcdh9-204ENSMUST00000193901 Cd164Q9R0L9 197 aa5.82□□□□□ -1.48
Pcdh9-204ENSMUST00000193901 P01643 108 aa5.81□□□□□ -1.48
Pcdh9-204ENSMUST00000193901 Q08AU9 97 aa5.81□□□□□ -1.48
Pcdh9-204ENSMUST00000193901 Ly6hQ9WUC3 139 aa5.81□□□□□ -1.48
Pcdh9-204ENSMUST00000193901 Zfp646Q6NV66 1788 aa5.81□□□□□ -1.48
Pcdh9-204ENSMUST00000193901 Defb45Q3V490 66 aa5.81□□□□□ -1.48
Pcdh9-204ENSMUST00000193901 Ighv2-6-8A0A0A6YWY9 116 aa5.81□□□□□ -1.48
Pcdh9-204ENSMUST00000193901 Gm10577Q3UDV9 132 aa5.81□□□□□ -1.48
Pcdh9-204ENSMUST00000193901 Fhl3Q9R059 289 aa5.81□□□□□ -1.48
Pcdh9-204ENSMUST00000193901 Ighv3-3A0A0A6YWL2 116 aa5.81□□□□□ -1.48
Pcdh9-204ENSMUST00000193901 P04940 107 aa5.81□□□□□ -1.48
Pcdh9-204ENSMUST00000193901 P04941 107 aa5.81□□□□□ -1.48
Pcdh9-204ENSMUST00000193901 PpdpfQ9CR37 115 aa5.81□□□□□ -1.48
Pcdh9-204ENSMUST00000193901 PatjQ63ZW7 1834 aa5.81□□□□□ -1.48
Pcdh9-204ENSMUST00000193901 2310009B15RikA0A0A6YWI4 143 aa5.81□□□□□ -1.48
Pcdh9-204ENSMUST00000193901 CtrlQ9ER05 264 aa5.81□□□□□ -1.48
Pcdh9-204ENSMUST00000193901 Brca1P48754 1812 aa5.81□□□□□ -1.48
Pcdh9-204ENSMUST00000193901 Gm44965A0A0N4SVR3 59 aa5.8□□□□□ -1.48
Pcdh9-204ENSMUST00000193901 P04942 107 aa5.8□□□□□ -1.48
Pcdh9-204ENSMUST00000193901 Lamb2Q61292 1799 aa5.8□□□□□ -1.48
Pcdh9-204ENSMUST00000193901 P04944 107 aa5.8□□□□□ -1.48
Pcdh9-204ENSMUST00000193901 Shank1D3YZU1 2167 aa5.8□□□□□ -1.48
Pcdh9-204ENSMUST00000193901 Cacna1eQ61290 2272 aa5.79□□□□□ -1.48
Pcdh9-204ENSMUST00000193901 Prok2Q9QXU7 128 aa5.79□□□□□ -1.48
Pcdh9-204ENSMUST00000193901 Gm16485Q8C4B7 115 aa5.79□□□□□ -1.48
Pcdh9-204ENSMUST00000193901 Gm9958Q8C9U4 106 aa5.79□□□□□ -1.48
Pcdh9-204ENSMUST00000193901 Zfp407G3UVV3 2246 aa5.79□□□□□ -1.48
Pcdh9-204ENSMUST00000193901 Igkv8-27A0A0G2JF28 120 aa5.78□□□□□ -1.48
Pcdh9-204ENSMUST00000193901 Map6d1Q14BB9 191 aa5.78□□□□□ -1.48
Pcdh9-204ENSMUST00000193901 Tsc2Q61037 1814 aa5.78□□□□□ -1.48
Pcdh9-204ENSMUST00000193901 Wfdc17Q5SSJ1 76 aa5.78□□□□□ -1.48
Pcdh9-204ENSMUST00000193901 Ly6g6dQ9Z1Q3 135 aa5.78□□□□□ -1.48
Pcdh9-204ENSMUST00000193901 Dock5B2RY04 1868 aa5.78□□□□□ -1.48
Pcdh9-204ENSMUST00000193901 Itgb4A2A863 1818 aa5.78□□□□□ -1.48
Pcdh9-204ENSMUST00000193901 TriobpQ99KW3 2014 aa5.78□□□□□ -1.48
Pcdh9-204ENSMUST00000193901 Gm5878E9PUB3 99 aa5.78□□□□□ -1.48
Pcdh9-204ENSMUST00000193901 Pla2g1bQ9Z0Y2 146 aa5.78□□□□□ -1.48
Pcdh9-204ENSMUST00000193901 Ahctf1Q8CJF7 2243 aaKnown RBP5.78□□□□□ -1.48
Pcdh9-204ENSMUST00000193901 Odf3l1Q810P2 275 aa5.78□□□□□ -1.48
Pcdh9-204ENSMUST00000193901 Bcorl1A2AQH4 1781 aa5.78□□□□□ -1.48
Pcdh9-204ENSMUST00000193901 P06328 117 aa5.77□□□□□ -1.49
Pcdh9-204ENSMUST00000193901 Fam208bQ5DTT3 2382 aa5.77□□□□□ -1.49
Pcdh9-204ENSMUST00000193901 Tanc1Q0VGY8 1856 aa5.77□□□□□ -1.49
Pcdh9-204ENSMUST00000193901 ScxQ64124 207 aa5.77□□□□□ -1.49
Pcdh9-204ENSMUST00000193901 Spint4Q9D263 159 aa5.77□□□□□ -1.49
Pcdh9-204ENSMUST00000193901 PikfyveQ9Z1T6 2097 aa5.77□□□□□ -1.49
Pcdh9-204ENSMUST00000193901 E030018B13RikJ3QMS9 113 aa5.77□□□□□ -1.49
Pcdh9-204ENSMUST00000193901 Col11a1Q61245 1804 aa5.77□□□□□ -1.49
Pcdh9-204ENSMUST00000193901 Ighv8-11A0A075B5X4 119 aa5.77□□□□□ -1.49
Pcdh9-204ENSMUST00000193901 2010109I03RikQ9CQ11 111 aa5.77□□□□□ -1.49
Pcdh9-204ENSMUST00000193901 Thsd7bQ6P4U0 1607 aa5.77□□□□□ -1.49
Pcdh9-204ENSMUST00000193901 SbsponQ3UPR9 264 aa5.76□□□□□ -1.49
Pcdh9-204ENSMUST00000193901 Ighv1-56A0A0A6YXG2 117 aa5.76□□□□□ -1.49
Pcdh9-204ENSMUST00000193901 Gm5629P06327 117 aa5.76□□□□□ -1.49
Pcdh9-204ENSMUST00000193901 Ly6c2P0CW03 131 aa5.76□□□□□ -1.49
Pcdh9-204ENSMUST00000193901 Gm1968Q3T9I3 115 aa5.76□□□□□ -1.49
Pcdh9-204ENSMUST00000193901 Tnrc6aQ3UHK8 1896 aaKnown RBP5.76□□□□□ -1.49
Pcdh9-204ENSMUST00000193901 Ighv1-59A0A0A6YXE0 117 aa5.76□□□□□ -1.49
Retrieved 100 of 22,080 RNA–protein pairs in 51.7 ms