RNA–Protein interactions for RNA: ENSMUST00000193901.5

Pcdh9-204, Transcript of Protocadherin 9, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Pcdh9, Length 6,127 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9-204ENSMUST00000193901 Cngb1E1AZ71 1325 aa12.82□□□□□ -0.36
Pcdh9-204ENSMUST00000193901 Rhox8Q6VSS7 320 aa12.78□□□□□ -0.36
Pcdh9-204ENSMUST00000193901 Pelp1Q9DBD5 1123 aaKnown RBP12.74□□□□□ -0.37
Pcdh9-204ENSMUST00000193901 Rpgrip1Q9EPQ2 1331 aa12.63□□□□□ -0.39
Pcdh9-204ENSMUST00000193901 Las1lA2BE28 776 aaKnown RBP12.57□□□□□ -0.4
Pcdh9-204ENSMUST00000193901 Wdr66E9Q743 1299 aa12.23□□□□□ -0.45
Pcdh9-204ENSMUST00000193901 4930567H17RikQ3V0K5 233 aa12.19□□□□□ -0.46
Pcdh9-204ENSMUST00000193901 Amer1Q7TS75 1132 aa12.17□□□□□ -0.46
Pcdh9-204ENSMUST00000193901 CenpbP27790 599 aa11.8□□□□□ -0.52
Pcdh9-204ENSMUST00000193901 Ube2uB1AUC4 352 aa11.74□□□□□ -0.53
Pcdh9-204ENSMUST00000193901 Stra8P70278 393 aa11.61□□□□□ -0.55
Pcdh9-204ENSMUST00000193901 Myt1Q8CFC2 1127 aa11.58□□□□□ -0.56
Pcdh9-204ENSMUST00000193901 Ehmt2Q9Z148 1263 aaKnown RBP11.46□□□□□ -0.58
Pcdh9-204ENSMUST00000193901 Zeb1Q64318 1117 aa11.45□□□□□ -0.58
Pcdh9-204ENSMUST00000193901 4933416C03RikQ3V063 378 aa11.44□□□□□ -0.58
Pcdh9-204ENSMUST00000193901 Ttbk1Q6PCN3 1308 aa11.27□□□□□ -0.61
Pcdh9-204ENSMUST00000193901 Esf1Q3V1V3 845 aaKnown RBP11.25□□□□□ -0.61
Pcdh9-204ENSMUST00000193901 Npm2Q80W85 207 aa11.2□□□□□ -0.62
Pcdh9-204ENSMUST00000193901 Anp32bQ9EST5 272 aaKnown RBP11.2□□□□□ -0.62
Pcdh9-204ENSMUST00000193901 NeflP08551 543 aa11.19□□□□□ -0.62
Pcdh9-204ENSMUST00000193901 Rtl5Q5DTT4 599 aa11.19□□□□□ -0.62
Pcdh9-204ENSMUST00000193901 NefmP08553 848 aa11.17□□□□□ -0.62
Pcdh9-204ENSMUST00000193901 Tnnt3Q9QZ47 272 aa11.16□□□□□ -0.62
Pcdh9-204ENSMUST00000193901 Slc24a1Q91WD8 1130 aa11.12□□□□□ -0.63
Pcdh9-204ENSMUST00000193901 NrdcQ8BHG1 1161 aa11.07□□□□□ -0.64
Pcdh9-204ENSMUST00000193901 Ythdc1E9Q5K9 736 aaKnown RBP11.03□□□□□ -0.64
Pcdh9-204ENSMUST00000193901 Gab3Q8BSM5 595 aa11.02□□□□□ -0.65
Pcdh9-204ENSMUST00000193901 Cdk11bP24788 784 aaKnown RBP11□□□□□ -0.65
Pcdh9-204ENSMUST00000193901 Myt1lP97500 1187 aa10.98□□□□□ -0.65
Pcdh9-204ENSMUST00000193901 Trim41Q5NCC3 630 aa10.97□□□□□ -0.65
Pcdh9-204ENSMUST00000193901 NischQ80TM9 1593 aa10.91□□□□□ -0.66
Pcdh9-204ENSMUST00000193901 Ccdc136Q3TVA9 1136 aa10.9□□□□□ -0.66
Pcdh9-204ENSMUST00000193901 CatipB9EKE5 520 aa10.89□□□□□ -0.67
Pcdh9-204ENSMUST00000193901 HrcG5E8J6 738 aa10.87□□□□□ -0.67
Pcdh9-204ENSMUST00000193901 Acin1Q9JIX8 1338 aaKnown RBP10.86□□□□□ -0.67
Pcdh9-204ENSMUST00000193901 DiexfQ8BTT6 772 aaKnown RBP10.86□□□□□ -0.67
Pcdh9-204ENSMUST00000193901 Os9Q8K2C7 672 aa10.78□□□□□ -0.68
Pcdh9-204ENSMUST00000193901 UbtfP25976 765 aaKnown RBP10.77□□□□□ -0.68
Pcdh9-204ENSMUST00000193901 Eif5bQ05D44 1216 aaKnown RBP10.76□□□□□ -0.69
Pcdh9-204ENSMUST00000193901 DaxxO35613 739 aa10.76□□□□□ -0.69
Pcdh9-204ENSMUST00000193901 Nop58Q6DFW4 536 aaKnown RBP10.74□□□□□ -0.69
Pcdh9-204ENSMUST00000193901 Upf2A2AT37 1269 aaKnown RBP10.68□□□□□ -0.7
Pcdh9-204ENSMUST00000193901 NclP09405 707 aaKnown RBP10.67□□□□□ -0.7
Pcdh9-204ENSMUST00000193901 Anp32aO35381 247 aa10.63□□□□□ -0.71
Pcdh9-204ENSMUST00000193901 Hsp90aa1P07901 733 aaKnown RBP10.61□□□□□ -0.71
Pcdh9-204ENSMUST00000193901 Neurod1Q60867 357 aa10.59□□□□□ -0.71
Pcdh9-204ENSMUST00000193901 Ccdc9Q8VC31 543 aaKnown RBP10.54□□□□□ -0.72
Pcdh9-204ENSMUST00000193901 Fam50aQ9WV03 339 aaKnown RBP10.51□□□□□ -0.73
Pcdh9-204ENSMUST00000193901 Lmod3E9QA62 571 aa10.49□□□□□ -0.73
Pcdh9-204ENSMUST00000193901 Pcgf6Q99NA9 353 aa10.47□□□□□ -0.73
Pcdh9-204ENSMUST00000193901 TonslQ6NZL6 1363 aa10.41□□□□□ -0.74
Pcdh9-204ENSMUST00000193901 Nlrp6Q91WS2 869 aa10.4□□□□□ -0.74
Pcdh9-204ENSMUST00000193901 Hdac5Q9Z2V6 1113 aa10.4□□□□□ -0.74
Pcdh9-204ENSMUST00000193901 Trim44Q9QXA7 346 aa10.38□□□□□ -0.75
Pcdh9-204ENSMUST00000193901 Gm13697A2AK42 830 aa10.36□□□□□ -0.75
Pcdh9-204ENSMUST00000193901 Abcc9P70170 1546 aa10.35□□□□□ -0.75
Pcdh9-204ENSMUST00000193901 Polr3glQ8R0C0 218 aa10.31□□□□□ -0.76
Pcdh9-204ENSMUST00000193901 Adam1bQ8R534 806 aa10.3□□□□□ -0.76
Pcdh9-204ENSMUST00000193901 ArxO35085 564 aa10.28□□□□□ -0.76
Pcdh9-204ENSMUST00000193901 Il27Q8K3I6 234 aa10.28□□□□□ -0.76
Pcdh9-204ENSMUST00000193901 Supt5hO55201 1082 aaKnown RBP10.27□□□□□ -0.77
Pcdh9-204ENSMUST00000193901 Znf326O88291 580 aa10.27□□□□□ -0.77
Pcdh9-204ENSMUST00000193901 DekQ7TNV0 380 aaKnown RBP10.26□□□□□ -0.77
Pcdh9-204ENSMUST00000193901 ClspnQ80YR7 1315 aa10.21□□□□□ -0.78
Pcdh9-204ENSMUST00000193901 Ap3b1Q9Z1T1 1105 aa10.2□□□□□ -0.78
Pcdh9-204ENSMUST00000193901 Abcc8B2RUS7 1588 aa10.2□□□□□ -0.78
Pcdh9-204ENSMUST00000193901 Chic1Q8CBW7 227 aa10.2□□□□□ -0.78
Pcdh9-204ENSMUST00000193901 Atp1b4Q99ME6 356 aa10.19□□□□□ -0.78
Pcdh9-204ENSMUST00000193901 Hnrnpul2Q00PI9 745 aaKnown RBP10.18□□□□□ -0.78
Pcdh9-204ENSMUST00000193901 PtmaP26350 111 aa10.18□□□□□ -0.78
Pcdh9-204ENSMUST00000193901 Calcoco2A2A6M5 331 aa10.17□□□□□ -0.78
Pcdh9-204ENSMUST00000193901 Gm13695A2AK44 830 aa10.17□□□□□ -0.78
Pcdh9-204ENSMUST00000193901 PnnO35691 725 aaKnown RBP10.17□□□□□ -0.78
Pcdh9-204ENSMUST00000193901 Tnnt2P50752 301 aa10.16□□□□□ -0.78
Pcdh9-204ENSMUST00000193901 Ppargc1bQ8VHJ7 1014 aa10.16□□□□□ -0.78
Pcdh9-204ENSMUST00000193901 Gm35339A0A140LHH9 1649 aa10.14□□□□□ -0.79
Pcdh9-204ENSMUST00000193901 Fgd1P52734 960 aa10.14□□□□□ -0.79
Pcdh9-204ENSMUST00000193901 Aplp2Q06335 707 aa10.12□□□□□ -0.79
Pcdh9-204ENSMUST00000193901 Mak16Q8BGS0 296 aaKnown RBP10.12□□□□□ -0.79
Pcdh9-204ENSMUST00000193901 Htatsf1Q8BGC0 757 aa10.11□□□□□ -0.79
Pcdh9-204ENSMUST00000193901 SetQ9EQU5 289 aaKnown RBP10.11□□□□□ -0.79
Pcdh9-204ENSMUST00000193901 Vsig10D3YX43 558 aa10.1□□□□□ -0.79
Pcdh9-204ENSMUST00000193901 Erich6D3Z6S9 713 aa10.06□□□□□ -0.8
Pcdh9-204ENSMUST00000193901 Calr4Q3TQS0 420 aa10.06□□□□□ -0.8
Pcdh9-204ENSMUST00000193901 Ppp4r2Q0VGB7 417 aa10.06□□□□□ -0.8
Pcdh9-204ENSMUST00000193901 Zbtb7cQ8VCZ7 619 aa10.06□□□□□ -0.8
Pcdh9-204ENSMUST00000193901 Gm973E9Q295 1059 aa10.06□□□□□ -0.8
Pcdh9-204ENSMUST00000193901 Wdr43Q6ZQL4 677 aaKnown RBP10.05□□□□□ -0.8
Pcdh9-204ENSMUST00000193901 Znf316Q6PGE4 1016 aa10.05□□□□□ -0.8
Pcdh9-204ENSMUST00000193901 Hsp90ab1P11499 724 aaKnown RBP10.04□□□□□ -0.8
Pcdh9-204ENSMUST00000193901 Casc1Q6TDU8 730 aa10.04□□□□□ -0.8
Pcdh9-204ENSMUST00000193901 Csrnp3P59055 597 aa10.03□□□□□ -0.8
Pcdh9-204ENSMUST00000193901 CanxP35564 591 aaKnown RBP10.02□□□□□ -0.8
Pcdh9-204ENSMUST00000193901 Prdm10Q3UTQ7 1184 aa10.01□□□□□ -0.81
Pcdh9-204ENSMUST00000193901 Anks4bQ8K3X6 423 aa10.01□□□□□ -0.81
Pcdh9-204ENSMUST00000193901 Plcb2A3KGF7 1181 aa9.99□□□□□ -0.81
Pcdh9-204ENSMUST00000193901 Zbtb4Q5F293 982 aa9.98□□□□□ -0.81
Pcdh9-204ENSMUST00000193901 Ccer2J3QPU5 274 aa9.98□□□□□ -0.81
Pcdh9-204ENSMUST00000193901 Map7d2A2AG50 781 aa9.98□□□□□ -0.81
Pcdh9-204ENSMUST00000193901 Ccdc180J3QNE4 1664 aa9.98□□□□□ -0.81
Retrieved 100 of 22,080 RNA–protein pairs in 28.9 ms