Protein–RNA interactions for Protein: Q3UHC2

Lrrk1, Leucine-rich repeat serine/threonine-protein kinase 1, mousemouse

Predictions only

Length 2,014 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrk1Q3UHC2 Gm25239-201ENSMUST00000174915 86 ntBASIC35,24■■■■□ 3,23
Lrrk1Q3UHC2 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC32,63■■■□□ 2,81
Lrrk1Q3UHC2 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC31,88■■■□□ 2,69
Lrrk1Q3UHC2 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC31,86■■■□□ 2,69
Lrrk1Q3UHC2 Gm15042-201ENSMUST00000120212 883 ntBASIC31,03■■■□□ 2,56
Lrrk1Q3UHC2 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC30,95■■■□□ 2,55
Lrrk1Q3UHC2 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC30,72■■■□□ 2,51
Lrrk1Q3UHC2 Gm15045-201ENSMUST00000117359 883 ntBASIC30,69■■■□□ 2,5
Lrrk1Q3UHC2 Gm24109-201ENSMUST00000175489 103 ntBASIC30,6■■■□□ 2,49
Lrrk1Q3UHC2 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC30,01■■■□□ 2,39
Lrrk1Q3UHC2 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC29,87■■■□□ 2,37
Lrrk1Q3UHC2 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC29,81■■■□□ 2,36
Lrrk1Q3UHC2 Psd-208ENSMUST00000224556 2034 ntBASIC29,5■■■□□ 2,31
Lrrk1Q3UHC2 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC29,49■■■□□ 2,31
Lrrk1Q3UHC2 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC29,47■■■□□ 2,31
Lrrk1Q3UHC2 Gm23366-201ENSMUST00000175022 89 ntBASIC29,35■■■□□ 2,29
Lrrk1Q3UHC2 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC29,28■■■□□ 2,28
Lrrk1Q3UHC2 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC29,22■■■□□ 2,27
Lrrk1Q3UHC2 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC29,18■■■□□ 2,26
Lrrk1Q3UHC2 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2,23
Lrrk1Q3UHC2 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC28,99■■■□□ 2,23
Lrrk1Q3UHC2 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC28,93■■■□□ 2,22
Lrrk1Q3UHC2 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC28,89■■■□□ 2,22
Lrrk1Q3UHC2 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC28,86■■■□□ 2,21
Lrrk1Q3UHC2 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC28,85■■■□□ 2,21
Lrrk1Q3UHC2 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC28,79■■■□□ 2,2
Lrrk1Q3UHC2 AC153911.1-202ENSMUST00000218534 1034 ntBASIC28,62■■■□□ 2,17
Lrrk1Q3UHC2 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC28,6■■■□□ 2,17
Lrrk1Q3UHC2 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC28,42■■■□□ 2,14
Lrrk1Q3UHC2 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC28,41■■■□□ 2,14
Lrrk1Q3UHC2 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC28,4■■■□□ 2,14
Lrrk1Q3UHC2 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC28,39■■■□□ 2,14
Lrrk1Q3UHC2 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC28,38■■■□□ 2,13
Lrrk1Q3UHC2 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC28,26■■■□□ 2,12
Lrrk1Q3UHC2 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC28,2■■■□□ 2,11
Lrrk1Q3UHC2 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC28,18■■■□□ 2,1
Lrrk1Q3UHC2 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC28,17■■■□□ 2,1
Lrrk1Q3UHC2 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC28,08■■■□□ 2,09
Lrrk1Q3UHC2 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC28,01■■■□□ 2,07
Lrrk1Q3UHC2 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC28,01■■■□□ 2,07
Lrrk1Q3UHC2 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC27,96■■■□□ 2,07
Lrrk1Q3UHC2 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC27,87■■■□□ 2,05
Lrrk1Q3UHC2 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC27,86■■■□□ 2,05
Lrrk1Q3UHC2 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC27,84■■■□□ 2,05
Lrrk1Q3UHC2 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC27,78■■■□□ 2,04
Lrrk1Q3UHC2 Gm25238-201ENSMUST00000174914 89 ntBASIC27,74■■■□□ 2,03
Lrrk1Q3UHC2 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC27,74■■■□□ 2,03
Lrrk1Q3UHC2 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC27,68■■■□□ 2,02
Lrrk1Q3UHC2 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC27,62■■■□□ 2,01
Lrrk1Q3UHC2 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC27,58■■■□□ 2,01
Lrrk1Q3UHC2 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC27,57■■■□□ 2
Lrrk1Q3UHC2 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC27,54■■■□□ 2
Lrrk1Q3UHC2 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC27,42■■□□□ 1,98
Lrrk1Q3UHC2 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC27,39■■□□□ 1,98
Lrrk1Q3UHC2 Gm27325-201ENSMUST00000175467 74 ntBASIC27,31■■□□□ 1,96
Lrrk1Q3UHC2 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC27,25■■□□□ 1,95
Lrrk1Q3UHC2 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC27,21■■□□□ 1,95
Lrrk1Q3UHC2 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC27,21■■□□□ 1,95
Lrrk1Q3UHC2 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC27,17■■□□□ 1,94
Lrrk1Q3UHC2 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC27,16■■□□□ 1,94
Lrrk1Q3UHC2 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC27,15■■□□□ 1,94
Lrrk1Q3UHC2 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC27,14■■□□□ 1,94
Lrrk1Q3UHC2 Gm10524-201ENSMUST00000181931 1893 ntBASIC27,11■■□□□ 1,93
Lrrk1Q3UHC2 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC27,11■■□□□ 1,93
Lrrk1Q3UHC2 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC27,11■■□□□ 1,93
Lrrk1Q3UHC2 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC27,07■■□□□ 1,92
Lrrk1Q3UHC2 Gm42596-201ENSMUST00000196305 1958 ntBASIC26,97■■□□□ 1,91
Lrrk1Q3UHC2 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC26,92■■□□□ 1,9
Lrrk1Q3UHC2 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC26,9■■□□□ 1,9
Lrrk1Q3UHC2 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC26,86■■□□□ 1,89
Lrrk1Q3UHC2 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC26,86■■□□□ 1,89
Lrrk1Q3UHC2 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC26,85■■□□□ 1,89
Lrrk1Q3UHC2 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC26,85■■□□□ 1,89
Lrrk1Q3UHC2 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC26,85■■□□□ 1,89
Lrrk1Q3UHC2 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC26,82■■□□□ 1,88
Lrrk1Q3UHC2 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC26,8■■□□□ 1,88
Lrrk1Q3UHC2 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC26,79■■□□□ 1,88
Lrrk1Q3UHC2 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC26,76■■□□□ 1,87
Lrrk1Q3UHC2 CT025624.2-201ENSMUST00000223609 1909 ntBASIC26,74■■□□□ 1,87
Lrrk1Q3UHC2 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC26,73■■□□□ 1,87
Lrrk1Q3UHC2 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC26,71■■□□□ 1,87
Lrrk1Q3UHC2 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC26,65■■□□□ 1,86
Lrrk1Q3UHC2 Gm25262-201ENSMUST00000174934 133 ntBASIC26,63■■□□□ 1,85
Lrrk1Q3UHC2 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC26,54■■□□□ 1,84
Lrrk1Q3UHC2 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC26,52■■□□□ 1,84
Lrrk1Q3UHC2 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC26,5■■□□□ 1,83
Lrrk1Q3UHC2 Rab21-202ENSMUST00000218831 843 ntBASIC26,49■■□□□ 1,83
Lrrk1Q3UHC2 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC26,4■■□□□ 1,82
Lrrk1Q3UHC2 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC26,39■■□□□ 1,81
Lrrk1Q3UHC2 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC26,37■■□□□ 1,81
Lrrk1Q3UHC2 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC26,35■■□□□ 1,81
Lrrk1Q3UHC2 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC26,34■■□□□ 1,81
Lrrk1Q3UHC2 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC26,34■■□□□ 1,81
Lrrk1Q3UHC2 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC26,32■■□□□ 1,8
Lrrk1Q3UHC2 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC26,32■■□□□ 1,8
Lrrk1Q3UHC2 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC26,31■■□□□ 1,8
Lrrk1Q3UHC2 Gm26115-201ENSMUST00000175605 87 ntBASIC26,27■■□□□ 1,8
Lrrk1Q3UHC2 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC26,26■■□□□ 1,79
Lrrk1Q3UHC2 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC26,24■■□□□ 1,79
Lrrk1Q3UHC2 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC26,23■■□□□ 1,79
Retrieved 100 of 76,532 protein–RNA pairs in 10,8 ms