Protein–RNA interactions for Protein: F6ZDS4

Tpr, Nucleoprotein TPR, mousemouse

Known RBP Predictions only

Length 2,431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TprF6ZDS4 Gm25239-201ENSMUST00000174915 86 ntBASIC36.33■■■■□ 3.41
TprF6ZDS4 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC33.72■■■□□ 2.99
TprF6ZDS4 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC33.38■■■□□ 2.93
TprF6ZDS4 Gm24109-201ENSMUST00000175489 103 ntBASIC32.02■■■□□ 2.72
TprF6ZDS4 Gm15042-201ENSMUST00000120212 883 ntBASIC31.23■■■□□ 2.59
TprF6ZDS4 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
TprF6ZDS4 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC30.65■■■□□ 2.5
TprF6ZDS4 Gm15045-201ENSMUST00000117359 883 ntBASIC30.57■■■□□ 2.48
TprF6ZDS4 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
TprF6ZDS4 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
TprF6ZDS4 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
TprF6ZDS4 Gm23366-201ENSMUST00000175022 89 ntBASIC30.1■■■□□ 2.41
TprF6ZDS4 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
TprF6ZDS4 AC153911.1-202ENSMUST00000218534 1034 ntBASIC30.05■■■□□ 2.4
TprF6ZDS4 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC29.91■■■□□ 2.38
TprF6ZDS4 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC29.77■■■□□ 2.36
TprF6ZDS4 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
TprF6ZDS4 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
TprF6ZDS4 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
TprF6ZDS4 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC29.09■■■□□ 2.25
TprF6ZDS4 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
TprF6ZDS4 Gm25238-201ENSMUST00000174914 89 ntBASIC28.88■■■□□ 2.21
TprF6ZDS4 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC28.86■■■□□ 2.21
TprF6ZDS4 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
TprF6ZDS4 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC28.47■■■□□ 2.15
TprF6ZDS4 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC28.37■■■□□ 2.13
TprF6ZDS4 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC28.34■■■□□ 2.13
TprF6ZDS4 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.12
TprF6ZDS4 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC28.32■■■□□ 2.12
TprF6ZDS4 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
TprF6ZDS4 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
TprF6ZDS4 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC28.2■■■□□ 2.1
TprF6ZDS4 Gm25262-201ENSMUST00000174934 133 ntBASIC28.19■■■□□ 2.1
TprF6ZDS4 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC28.16■■■□□ 2.1
TprF6ZDS4 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
TprF6ZDS4 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC28.06■■■□□ 2.08
TprF6ZDS4 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC27.94■■■□□ 2.06
TprF6ZDS4 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC27.93■■■□□ 2.06
TprF6ZDS4 Gm26115-201ENSMUST00000175605 87 ntBASIC27.9■■■□□ 2.06
TprF6ZDS4 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC27.9■■■□□ 2.06
TprF6ZDS4 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC27.88■■■□□ 2.05
TprF6ZDS4 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC27.87■■■□□ 2.05
TprF6ZDS4 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC27.7■■■□□ 2.02
TprF6ZDS4 Gm8109-201ENSMUST00000194076 746 ntBASIC27.68■■■□□ 2.02
TprF6ZDS4 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC27.63■■■□□ 2.01
TprF6ZDS4 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
TprF6ZDS4 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
TprF6ZDS4 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC27.54■■■□□ 2
TprF6ZDS4 Gm27325-201ENSMUST00000175467 74 ntBASIC27.52■■■□□ 2
TprF6ZDS4 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC27.49■■□□□ 1.99
TprF6ZDS4 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
TprF6ZDS4 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC27.49■■□□□ 1.99
TprF6ZDS4 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
TprF6ZDS4 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC27.31■■□□□ 1.96
TprF6ZDS4 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
TprF6ZDS4 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC27.3■■□□□ 1.96
TprF6ZDS4 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
TprF6ZDS4 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC27.18■■□□□ 1.94
TprF6ZDS4 Rab21-202ENSMUST00000218831 843 ntBASIC27.15■■□□□ 1.94
TprF6ZDS4 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
TprF6ZDS4 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC26.87■■□□□ 1.89
TprF6ZDS4 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
TprF6ZDS4 Psd-208ENSMUST00000224556 2034 ntBASIC26.85■■□□□ 1.89
TprF6ZDS4 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
TprF6ZDS4 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
TprF6ZDS4 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC26.77■■□□□ 1.88
TprF6ZDS4 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC26.75■■□□□ 1.87
TprF6ZDS4 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC26.75■■□□□ 1.87
TprF6ZDS4 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC26.71■■□□□ 1.87
TprF6ZDS4 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC26.66■■□□□ 1.86
TprF6ZDS4 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
TprF6ZDS4 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC26.62■■□□□ 1.85
TprF6ZDS4 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC26.61■■□□□ 1.85
TprF6ZDS4 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
TprF6ZDS4 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC26.6■■□□□ 1.85
TprF6ZDS4 Gm24804-201ENSMUST00000174982 85 ntBASIC26.59■■□□□ 1.85
TprF6ZDS4 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC26.54■■□□□ 1.84
TprF6ZDS4 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
TprF6ZDS4 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
TprF6ZDS4 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC26.44■■□□□ 1.82
TprF6ZDS4 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC26.43■■□□□ 1.82
TprF6ZDS4 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
TprF6ZDS4 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC26.4■■□□□ 1.82
TprF6ZDS4 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC26.39■■□□□ 1.82
TprF6ZDS4 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
TprF6ZDS4 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
TprF6ZDS4 Zfp131-205ENSMUST00000223812 663 ntBASIC26.37■■□□□ 1.81
TprF6ZDS4 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC26.37■■□□□ 1.81
TprF6ZDS4 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC26.34■■□□□ 1.81
TprF6ZDS4 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC26.31■■□□□ 1.8
TprF6ZDS4 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
TprF6ZDS4 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
TprF6ZDS4 Gm17082-201ENSMUST00000166043 1091 ntBASIC26.27■■□□□ 1.8
TprF6ZDS4 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC26.13■■□□□ 1.77
TprF6ZDS4 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
TprF6ZDS4 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
TprF6ZDS4 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
TprF6ZDS4 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC26.05■■□□□ 1.76
TprF6ZDS4 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC26.03■■□□□ 1.76
TprF6ZDS4 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC26.03■■□□□ 1.76
Retrieved 100 of 76,532 protein–RNA pairs in 14.9 ms