RNA–Protein interactions for RNA: ENSMUST00000112251.8

Ubr3-202, Transcript of E3 ubiquitin-protein ligase UBR3, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Ubr3, Length 8,081 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3-202ENSMUST00000112251 Ighv10-1A0A0B4J1J6 119 aa12.99□□□□□ -0.33
Ubr3-202ENSMUST00000112251 Atp5eP56382 52 aa12.99□□□□□ -0.33
Ubr3-202ENSMUST00000112251 Them7Q9DCP4 223 aa12.99□□□□□ -0.33
Ubr3-202ENSMUST00000112251 Cdpf1Q8R3A2 119 aa12.99□□□□□ -0.33
Ubr3-202ENSMUST00000112251 Ube2d1P61080 147 aaKnown RBP12.98□□□□□ -0.33
Ubr3-202ENSMUST00000112251 Pla2g5P97391 137 aa12.98□□□□□ -0.33
Ubr3-202ENSMUST00000112251 LenepQ9WVB6 61 aa12.98□□□□□ -0.33
Ubr3-202ENSMUST00000112251 Gm10553J3QPF1 123 aa12.98□□□□□ -0.33
Ubr3-202ENSMUST00000112251 P06320 134 aa12.98□□□□□ -0.33
Ubr3-202ENSMUST00000112251 Rpl39P62892 51 aa12.98□□□□□ -0.33
Ubr3-202ENSMUST00000112251 P18528 98 aa12.98□□□□□ -0.33
Ubr3-202ENSMUST00000112251 Cryba4Q9JJV0 196 aa12.97□□□□□ -0.33
Ubr3-202ENSMUST00000112251 NmbQ9CR53 121 aa12.97□□□□□ -0.33
Ubr3-202ENSMUST00000112251 Ccl24Q9JKC0 119 aa12.97□□□□□ -0.33
Ubr3-202ENSMUST00000112251 Atp5g3P56384 141 aa12.97□□□□□ -0.33
Ubr3-202ENSMUST00000112251 Cnot1Q6ZQ08 2375 aaKnown RBP12.97□□□□□ -0.33
Ubr3-202ENSMUST00000112251 Plac8l1Q08EJ0 177 aa12.97□□□□□ -0.33
Ubr3-202ENSMUST00000112251 Ltbp4Q8K4G1 1666 aa12.97□□□□□ -0.33
Ubr3-202ENSMUST00000112251 Iglc1A0A0G2JE99 106 aa12.96□□□□□ -0.33
Ubr3-202ENSMUST00000112251 Inafm1E9PV59 130 aa12.96□□□□□ -0.33
Ubr3-202ENSMUST00000112251 P01843 105 aa12.96□□□□□ -0.33
Ubr3-202ENSMUST00000112251 Csrp1P97315 193 aaKnown RBP12.96□□□□□ -0.33
Ubr3-202ENSMUST00000112251 Nhsl1Q8CAF4 1587 aa12.96□□□□□ -0.33
Ubr3-202ENSMUST00000112251 Gm10542F6XDR3 90 aa12.96□□□□□ -0.33
Ubr3-202ENSMUST00000112251 Fam110aQ8R184 296 aa12.96□□□□□ -0.33
Ubr3-202ENSMUST00000112251 EnhoQ8K1D8 76 aa12.96□□□□□ -0.34
Ubr3-202ENSMUST00000112251 Ly6g6dQ9Z1Q3 135 aa12.96□□□□□ -0.34
Ubr3-202ENSMUST00000112251 Psmb8P28063 276 aa12.96□□□□□ -0.34
Ubr3-202ENSMUST00000112251 Trav6n-6A0A075B6B2 114 aa12.95□□□□□ -0.34
Ubr3-202ENSMUST00000112251 Gm10401E9Q3K6 71 aa12.95□□□□□ -0.34
Ubr3-202ENSMUST00000112251 EpopQ7TNS8 369 aa12.95□□□□□ -0.34
Ubr3-202ENSMUST00000112251 Trav12-3A0A075B648 115 aa12.95□□□□□ -0.34
Ubr3-202ENSMUST00000112251 Ighv1-76A0A0G2JFE9 117 aa12.95□□□□□ -0.34
Ubr3-202ENSMUST00000112251 Gm21994F6T2D2 329 aa12.95□□□□□ -0.34
Ubr3-202ENSMUST00000112251 Serp2Q6TAW2 65 aa12.95□□□□□ -0.34
Ubr3-202ENSMUST00000112251 Wipf1Q8K1I7 493 aa12.95□□□□□ -0.34
Ubr3-202ENSMUST00000112251 Plxna4Q80UG2 1893 aa12.95□□□□□ -0.34
Ubr3-202ENSMUST00000112251 Atox1O08997 68 aaKnown RBP12.94□□□□□ -0.34
Ubr3-202ENSMUST00000112251 Znf672Q99LH4 468 aa12.94□□□□□ -0.34
Ubr3-202ENSMUST00000112251 Cspg4Q8VHY0 2327 aa12.94□□□□□ -0.34
Ubr3-202ENSMUST00000112251 Gm10192Q3V0S1 108 aa12.94□□□□□ -0.34
Ubr3-202ENSMUST00000112251 Ube2d3P61079 147 aa12.94□□□□□ -0.34
Ubr3-202ENSMUST00000112251 Gvin1Q80SU7 2427 aa12.94□□□□□ -0.34
Ubr3-202ENSMUST00000112251 P01660 111 aa12.93□□□□□ -0.34
Ubr3-202ENSMUST00000112251 Dopey1Q8BL99 2399 aa12.93□□□□□ -0.34
Ubr3-202ENSMUST00000112251 AmelxP63277 210 aa12.93□□□□□ -0.34
Ubr3-202ENSMUST00000112251 Defb40Q70KL2 73 aa12.93□□□□□ -0.34
Ubr3-202ENSMUST00000112251 CenpwQ3URR0 86 aa12.93□□□□□ -0.34
Ubr3-202ENSMUST00000112251 Pmaip1Q9JM54 103 aa12.93□□□□□ -0.34
Ubr3-202ENSMUST00000112251 Ighv8-2A0A0A6YW58 119 aa12.92□□□□□ -0.34
Ubr3-202ENSMUST00000112251 Pde6gP09174 87 aa12.92□□□□□ -0.34
Ubr3-202ENSMUST00000112251 Cox7cP17665 63 aa12.92□□□□□ -0.34
Ubr3-202ENSMUST00000112251 4930470P17RikQ9D542 155 aa12.92□□□□□ -0.34
Ubr3-202ENSMUST00000112251 1520401A03RikA0A0J9YVH6 598 aa12.92□□□□□ -0.34
Ubr3-202ENSMUST00000112251 Ighv1-19A0A0A6YWX0 117 aa12.91□□□□□ -0.34
Ubr3-202ENSMUST00000112251 Odf1Q61999 247 aa12.91□□□□□ -0.34
Ubr3-202ENSMUST00000112251 Gm26602M0QWA4 95 aa12.91□□□□□ -0.34
Ubr3-202ENSMUST00000112251 Fam216bQ8CC14 138 aa12.91□□□□□ -0.34
Ubr3-202ENSMUST00000112251 Klk5Q9D140 293 aa12.91□□□□□ -0.34
Ubr3-202ENSMUST00000112251 Ighv5-8A0A075B676 92 aa12.91□□□□□ -0.34
Ubr3-202ENSMUST00000112251 Ighv1-82A0A0G2JEU7 117 aa12.91□□□□□ -0.34
Ubr3-202ENSMUST00000112251 Q99M08 65 aa12.91□□□□□ -0.34
Ubr3-202ENSMUST00000112251 UrahQ9CRB3 118 aa12.9□□□□□ -0.34
Ubr3-202ENSMUST00000112251 Ndufc1Q9CQY9 76 aa12.9□□□□□ -0.34
Ubr3-202ENSMUST00000112251 Ufsp1Q9CZP0 217 aa12.9□□□□□ -0.35
Ubr3-202ENSMUST00000112251 Ighv1-52A0A0A6YXC3 117 aa12.89□□□□□ -0.35
Ubr3-202ENSMUST00000112251 Gm28539A0A087WSL9 92 aa12.89□□□□□ -0.35
Ubr3-202ENSMUST00000112251 Kiaa1549Q68FD9 1940 aa12.88□□□□□ -0.35
Ubr3-202ENSMUST00000112251 Tmem223Q9CQE2 199 aaKnown RBP12.88□□□□□ -0.35
Ubr3-202ENSMUST00000112251 Igkv8-28A0A0G2JE47 121 aa12.88□□□□□ -0.35
Ubr3-202ENSMUST00000112251 P01753 117 aa12.88□□□□□ -0.35
Ubr3-202ENSMUST00000112251 Trav12d-3A0A075B6A4 115 aa12.88□□□□□ -0.35
Ubr3-202ENSMUST00000112251 Ighv1-77A0A0G2JGS9 117 aa12.88□□□□□ -0.35
Ubr3-202ENSMUST00000112251 4933414I15RikQ9D4D5 133 aa12.88□□□□□ -0.35
Ubr3-202ENSMUST00000112251 Gm37988J3QM41 62 aa12.87□□□□□ -0.35
Ubr3-202ENSMUST00000112251 LoxP28301 411 aa12.87□□□□□ -0.35
Ubr3-202ENSMUST00000112251 ScxQ64124 207 aa12.87□□□□□ -0.35
Ubr3-202ENSMUST00000112251 TeppQ6IMH0 216 aa12.87□□□□□ -0.35
Ubr3-202ENSMUST00000112251 4930535I16RikQ9CUI2 172 aa12.87□□□□□ -0.35
Ubr3-202ENSMUST00000112251 Ighv1-12A0A0A6YXJ9 117 aa12.87□□□□□ -0.35
Ubr3-202ENSMUST00000112251 Vopp1Q8R1C3 172 aa12.86□□□□□ -0.35
Ubr3-202ENSMUST00000112251 Eif4ebp2P70445 120 aa12.86□□□□□ -0.35
Ubr3-202ENSMUST00000112251 Igkv12-89A0A0G2JGW8 112 aa12.86□□□□□ -0.35
Ubr3-202ENSMUST00000112251 BC107364E9Q5A2 140 aa12.86□□□□□ -0.35
Ubr3-202ENSMUST00000112251 Gm9970F6ZED4 185 aa12.86□□□□□ -0.35
Ubr3-202ENSMUST00000112251 Gm42674D3YUT9 64 aa12.86□□□□□ -0.35
Ubr3-202ENSMUST00000112251 Timm17bQ9Z0V7 172 aa12.86□□□□□ -0.35
Ubr3-202ENSMUST00000112251 Lrp4Q8VI56 1905 aa12.85□□□□□ -0.35
Ubr3-202ENSMUST00000112251 Trbv16A0A0B4J1H3 115 aa12.85□□□□□ -0.35
Ubr3-202ENSMUST00000112251 Zfp36l1P23950 338 aa12.85□□□□□ -0.35
Ubr3-202ENSMUST00000112251 P01750 117 aa12.84□□□□□ -0.35
Ubr3-202ENSMUST00000112251 Fam19a5Q91WE9 132 aa12.84□□□□□ -0.35
Ubr3-202ENSMUST00000112251 1500011B03RikQ3TTH7 73 aa12.84□□□□□ -0.35
Ubr3-202ENSMUST00000112251 2010109I03RikQ9CQ11 111 aa12.84□□□□□ -0.35
Ubr3-202ENSMUST00000112251 AW146154Q3TPQ7 468 aa12.84□□□□□ -0.35
Ubr3-202ENSMUST00000112251 1700010B08RikQ9DAI7 102 aa12.84□□□□□ -0.35
Ubr3-202ENSMUST00000112251 P01649 108 aa12.83□□□□□ -0.36
Ubr3-202ENSMUST00000112251 LhbO09108 141 aa12.83□□□□□ -0.36
Ubr3-202ENSMUST00000112251 Rhno1Q8K3A4 235 aa12.83□□□□□ -0.36
Ubr3-202ENSMUST00000112251 Ighv1-11A0A0A6YWI9 117 aa12.83□□□□□ -0.36
Retrieved 100 of 22,080 RNA–protein pairs in 62.8 ms