Protein–RNA interactions for Protein: Q8VI56

Lrp4, Low-density lipoprotein receptor-related protein 4, mousemouse

Predictions only

Length 1,905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrp4Q8VI56 Gm25239-201ENSMUST00000174915 86 ntBASIC37,59■■■■□ 3,61
Lrp4Q8VI56 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC34,92■■■■□ 3,18
Lrp4Q8VI56 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC34,09■■■■□ 3,05
Lrp4Q8VI56 Gm15042-201ENSMUST00000120212 883 ntBASIC32,85■■■□□ 2,85
Lrp4Q8VI56 Gm24109-201ENSMUST00000175489 103 ntBASIC32,75■■■□□ 2,83
Lrp4Q8VI56 Gm15045-201ENSMUST00000117359 883 ntBASIC32,36■■■□□ 2,77
Lrp4Q8VI56 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC32,17■■■□□ 2,74
Lrp4Q8VI56 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC31,83■■■□□ 2,69
Lrp4Q8VI56 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC31,81■■■□□ 2,68
Lrp4Q8VI56 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC31,47■■■□□ 2,63
Lrp4Q8VI56 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC31,42■■■□□ 2,62
Lrp4Q8VI56 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC31,37■■■□□ 2,61
Lrp4Q8VI56 Gm23366-201ENSMUST00000175022 89 ntBASIC31,3■■■□□ 2,6
Lrp4Q8VI56 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC31,05■■■□□ 2,56
Lrp4Q8VI56 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC30,49■■■□□ 2,47
Lrp4Q8VI56 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC30,49■■■□□ 2,47
Lrp4Q8VI56 AC153911.1-202ENSMUST00000218534 1034 ntBASIC30,44■■■□□ 2,46
Lrp4Q8VI56 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC30,37■■■□□ 2,45
Lrp4Q8VI56 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC30,22■■■□□ 2,43
Lrp4Q8VI56 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC30,18■■■□□ 2,42
Lrp4Q8VI56 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC30,11■■■□□ 2,41
Lrp4Q8VI56 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC30,11■■■□□ 2,41
Lrp4Q8VI56 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC29,97■■■□□ 2,39
Lrp4Q8VI56 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC29,96■■■□□ 2,39
Lrp4Q8VI56 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC29,88■■■□□ 2,37
Lrp4Q8VI56 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC29,87■■■□□ 2,37
Lrp4Q8VI56 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC29,86■■■□□ 2,37
Lrp4Q8VI56 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC29,83■■■□□ 2,37
Lrp4Q8VI56 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC29,81■■■□□ 2,36
Lrp4Q8VI56 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC29,8■■■□□ 2,36
Lrp4Q8VI56 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC29,78■■■□□ 2,36
Lrp4Q8VI56 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC29,68■■■□□ 2,34
Lrp4Q8VI56 Gm25238-201ENSMUST00000174914 89 ntBASIC29,67■■■□□ 2,34
Lrp4Q8VI56 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC29,61■■■□□ 2,33
Lrp4Q8VI56 Psd-208ENSMUST00000224556 2034 ntBASIC29,55■■■□□ 2,32
Lrp4Q8VI56 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC29,55■■■□□ 2,32
Lrp4Q8VI56 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC29,55■■■□□ 2,32
Lrp4Q8VI56 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC29,2■■■□□ 2,26
Lrp4Q8VI56 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC29,11■■■□□ 2,25
Lrp4Q8VI56 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC28,96■■■□□ 2,23
Lrp4Q8VI56 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC28,92■■■□□ 2,22
Lrp4Q8VI56 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC28,8■■■□□ 2,2
Lrp4Q8VI56 Gm27325-201ENSMUST00000175467 74 ntBASIC28,79■■■□□ 2,2
Lrp4Q8VI56 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC28,79■■■□□ 2,2
Lrp4Q8VI56 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC28,77■■■□□ 2,2
Lrp4Q8VI56 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC28,71■■■□□ 2,19
Lrp4Q8VI56 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC28,7■■■□□ 2,19
Lrp4Q8VI56 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC28,66■■■□□ 2,18
Lrp4Q8VI56 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC28,65■■■□□ 2,18
Lrp4Q8VI56 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC28,62■■■□□ 2,17
Lrp4Q8VI56 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC28,59■■■□□ 2,17
Lrp4Q8VI56 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC28,51■■■□□ 2,16
Lrp4Q8VI56 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC28,51■■■□□ 2,15
Lrp4Q8VI56 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC28,42■■■□□ 2,14
Lrp4Q8VI56 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC28,39■■■□□ 2,14
Lrp4Q8VI56 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC28,37■■■□□ 2,13
Lrp4Q8VI56 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC28,28■■■□□ 2,12
Lrp4Q8VI56 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC28,26■■■□□ 2,12
Lrp4Q8VI56 Gm25262-201ENSMUST00000174934 133 ntBASIC28,24■■■□□ 2,11
Lrp4Q8VI56 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC28,2■■■□□ 2,11
Lrp4Q8VI56 Rab21-202ENSMUST00000218831 843 ntBASIC28,2■■■□□ 2,1
Lrp4Q8VI56 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC28,11■■■□□ 2,09
Lrp4Q8VI56 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC28,1■■■□□ 2,09
Lrp4Q8VI56 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC28,1■■■□□ 2,09
Lrp4Q8VI56 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC28,08■■■□□ 2,09
Lrp4Q8VI56 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC28,07■■■□□ 2,08
Lrp4Q8VI56 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC28,06■■■□□ 2,08
Lrp4Q8VI56 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC27,99■■■□□ 2,07
Lrp4Q8VI56 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC27,98■■■□□ 2,07
Lrp4Q8VI56 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC27,92■■■□□ 2,06
Lrp4Q8VI56 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC27,92■■■□□ 2,06
Lrp4Q8VI56 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC27,9■■■□□ 2,06
Lrp4Q8VI56 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC27,88■■■□□ 2,05
Lrp4Q8VI56 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC27,86■■■□□ 2,05
Lrp4Q8VI56 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC27,85■■■□□ 2,05
Lrp4Q8VI56 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC27,82■■■□□ 2,04
Lrp4Q8VI56 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC27,8■■■□□ 2,04
Lrp4Q8VI56 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC27,79■■■□□ 2,04
Lrp4Q8VI56 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC27,73■■■□□ 2,03
Lrp4Q8VI56 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC27,72■■■□□ 2,03
Lrp4Q8VI56 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC27,72■■■□□ 2,03
Lrp4Q8VI56 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC27,72■■■□□ 2,03
Lrp4Q8VI56 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC27,69■■■□□ 2,02
Lrp4Q8VI56 Gm8109-201ENSMUST00000194076 746 ntBASIC27,65■■■□□ 2,02
Lrp4Q8VI56 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC27,64■■■□□ 2,01
Lrp4Q8VI56 Gm26115-201ENSMUST00000175605 87 ntBASIC27,63■■■□□ 2,01
Lrp4Q8VI56 Gm42596-201ENSMUST00000196305 1958 ntBASIC27,6■■■□□ 2,01
Lrp4Q8VI56 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC27,6■■■□□ 2,01
Lrp4Q8VI56 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC27,6■■■□□ 2,01
Lrp4Q8VI56 Gm10524-201ENSMUST00000181931 1893 ntBASIC27,6■■■□□ 2,01
Lrp4Q8VI56 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC27,57■■■□□ 2
Lrp4Q8VI56 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC27,57■■■□□ 2
Lrp4Q8VI56 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC27,56■■■□□ 2
Lrp4Q8VI56 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC27,56■■■□□ 2
Lrp4Q8VI56 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC27,52■■■□□ 2
Lrp4Q8VI56 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC27,48■■□□□ 1,99
Lrp4Q8VI56 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC27,47■■□□□ 1,99
Lrp4Q8VI56 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC27,39■■□□□ 1,97
Lrp4Q8VI56 CT025624.2-201ENSMUST00000223609 1909 ntBASIC27,38■■□□□ 1,97
Lrp4Q8VI56 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC27,37■■□□□ 1,97
Retrieved 100 of 76,532 protein–RNA pairs in 12,8 ms