Protein–RNA interactions for Protein: A0A0G2JE47

Igkv8-28, Immunoglobulin kappa variable 8-28 (Fragment), mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv8-28A0A0G2JE47 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC21,42■■□□□ 1,02
Igkv8-28A0A0G2JE47 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC20,62■□□□□ 0,89
Igkv8-28A0A0G2JE47 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC20,49■□□□□ 0,87
Igkv8-28A0A0G2JE47 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC20,42■□□□□ 0,86
Igkv8-28A0A0G2JE47 Gm25239-201ENSMUST00000174915 86 ntBASIC20,31■□□□□ 0,84
Igkv8-28A0A0G2JE47 Psd-208ENSMUST00000224556 2034 ntBASIC20,21■□□□□ 0,83
Igkv8-28A0A0G2JE47 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC20,06■□□□□ 0,8
Igkv8-28A0A0G2JE47 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC19,4■□□□□ 0,7
Igkv8-28A0A0G2JE47 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC19,36■□□□□ 0,69
Igkv8-28A0A0G2JE47 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC19,24■□□□□ 0,67
Igkv8-28A0A0G2JE47 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC19,17■□□□□ 0,66
Igkv8-28A0A0G2JE47 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC19,14■□□□□ 0,65
Igkv8-28A0A0G2JE47 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC19,11■□□□□ 0,65
Igkv8-28A0A0G2JE47 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC19,06■□□□□ 0,64
Igkv8-28A0A0G2JE47 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC18,97■□□□□ 0,63
Igkv8-28A0A0G2JE47 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC18,95■□□□□ 0,62
Igkv8-28A0A0G2JE47 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC18,91■□□□□ 0,62
Igkv8-28A0A0G2JE47 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC18,84■□□□□ 0,61
Igkv8-28A0A0G2JE47 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC18,72■□□□□ 0,59
Igkv8-28A0A0G2JE47 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC18,62■□□□□ 0,57
Igkv8-28A0A0G2JE47 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC18,55■□□□□ 0,56
Igkv8-28A0A0G2JE47 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC18,51■□□□□ 0,55
Igkv8-28A0A0G2JE47 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC18,5■□□□□ 0,55
Igkv8-28A0A0G2JE47 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC18,5■□□□□ 0,55
Igkv8-28A0A0G2JE47 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC18,47■□□□□ 0,55
Igkv8-28A0A0G2JE47 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC18,39■□□□□ 0,53
Igkv8-28A0A0G2JE47 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC18,38■□□□□ 0,53
Igkv8-28A0A0G2JE47 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC18,37■□□□□ 0,53
Igkv8-28A0A0G2JE47 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC18,35■□□□□ 0,53
Igkv8-28A0A0G2JE47 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC18,34■□□□□ 0,53
Igkv8-28A0A0G2JE47 Gm42596-201ENSMUST00000196305 1958 ntBASIC18,3■□□□□ 0,52
Igkv8-28A0A0G2JE47 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC18,3■□□□□ 0,52
Igkv8-28A0A0G2JE47 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC18,29■□□□□ 0,52
Igkv8-28A0A0G2JE47 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC18,26■□□□□ 0,51
Igkv8-28A0A0G2JE47 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC18,2■□□□□ 0,5
Igkv8-28A0A0G2JE47 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC18,15■□□□□ 0,5
Igkv8-28A0A0G2JE47 Gm15042-201ENSMUST00000120212 883 ntBASIC18,13■□□□□ 0,49
Igkv8-28A0A0G2JE47 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC18,03■□□□□ 0,48
Igkv8-28A0A0G2JE47 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC18,01■□□□□ 0,47
Igkv8-28A0A0G2JE47 Gm10524-201ENSMUST00000181931 1893 ntBASIC18■□□□□ 0,47
Igkv8-28A0A0G2JE47 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC17,98■□□□□ 0,47
Igkv8-28A0A0G2JE47 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC17,94■□□□□ 0,46
Igkv8-28A0A0G2JE47 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC17,94■□□□□ 0,46
Igkv8-28A0A0G2JE47 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC17,93■□□□□ 0,46
Igkv8-28A0A0G2JE47 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC17,92■□□□□ 0,46
Igkv8-28A0A0G2JE47 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC17,91■□□□□ 0,46
Igkv8-28A0A0G2JE47 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC17,88■□□□□ 0,45
Igkv8-28A0A0G2JE47 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC17,84■□□□□ 0,45
Igkv8-28A0A0G2JE47 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC17,82■□□□□ 0,44
Igkv8-28A0A0G2JE47 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC17,75■□□□□ 0,43
Igkv8-28A0A0G2JE47 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC17,75■□□□□ 0,43
Igkv8-28A0A0G2JE47 Gm15045-201ENSMUST00000117359 883 ntBASIC17,73■□□□□ 0,43
Igkv8-28A0A0G2JE47 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC17,72■□□□□ 0,43
Igkv8-28A0A0G2JE47 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC17,71■□□□□ 0,43
Igkv8-28A0A0G2JE47 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC17,67■□□□□ 0,42
Igkv8-28A0A0G2JE47 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC17,65■□□□□ 0,42
Igkv8-28A0A0G2JE47 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC17,62■□□□□ 0,41
Igkv8-28A0A0G2JE47 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC17,61■□□□□ 0,41
Igkv8-28A0A0G2JE47 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC17,59■□□□□ 0,41
Igkv8-28A0A0G2JE47 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC17,57■□□□□ 0,4
Igkv8-28A0A0G2JE47 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC17,56■□□□□ 0,4
Igkv8-28A0A0G2JE47 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC17,55■□□□□ 0,4
Igkv8-28A0A0G2JE47 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC17,54■□□□□ 0,4
Igkv8-28A0A0G2JE47 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC17,49■□□□□ 0,39
Igkv8-28A0A0G2JE47 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC17,49■□□□□ 0,39
Igkv8-28A0A0G2JE47 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC17,48■□□□□ 0,39
Igkv8-28A0A0G2JE47 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC17,46■□□□□ 0,39
Igkv8-28A0A0G2JE47 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC17,45■□□□□ 0,38
Igkv8-28A0A0G2JE47 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC17,45■□□□□ 0,38
Igkv8-28A0A0G2JE47 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC17,42■□□□□ 0,38
Igkv8-28A0A0G2JE47 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC17,42■□□□□ 0,38
Igkv8-28A0A0G2JE47 Gm24109-201ENSMUST00000175489 103 ntBASIC17,41■□□□□ 0,38
Igkv8-28A0A0G2JE47 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC17,36■□□□□ 0,37
Igkv8-28A0A0G2JE47 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC17,35■□□□□ 0,37
Igkv8-28A0A0G2JE47 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC17,35■□□□□ 0,37
Igkv8-28A0A0G2JE47 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC17,33■□□□□ 0,37
Igkv8-28A0A0G2JE47 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC17,33■□□□□ 0,37
Igkv8-28A0A0G2JE47 CT025624.2-201ENSMUST00000223609 1909 ntBASIC17,32■□□□□ 0,36
Igkv8-28A0A0G2JE47 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC17,31■□□□□ 0,36
Igkv8-28A0A0G2JE47 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC17,31■□□□□ 0,36
Igkv8-28A0A0G2JE47 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC17,25■□□□□ 0,35
Igkv8-28A0A0G2JE47 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC17,23■□□□□ 0,35
Igkv8-28A0A0G2JE47 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC17,19■□□□□ 0,34
Igkv8-28A0A0G2JE47 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC17,19■□□□□ 0,34
Igkv8-28A0A0G2JE47 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC17,17■□□□□ 0,34
Igkv8-28A0A0G2JE47 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC17,17■□□□□ 0,34
Igkv8-28A0A0G2JE47 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC17,17■□□□□ 0,34
Igkv8-28A0A0G2JE47 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC17,16■□□□□ 0,34
Igkv8-28A0A0G2JE47 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC17,16■□□□□ 0,34
Igkv8-28A0A0G2JE47 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC17,14■□□□□ 0,33
Igkv8-28A0A0G2JE47 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC17,13■□□□□ 0,33
Igkv8-28A0A0G2JE47 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC17,12■□□□□ 0,33
Igkv8-28A0A0G2JE47 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17,11■□□□□ 0,33
Igkv8-28A0A0G2JE47 Gm23366-201ENSMUST00000175022 89 ntBASIC17,1■□□□□ 0,33
Igkv8-28A0A0G2JE47 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC17,08■□□□□ 0,33
Igkv8-28A0A0G2JE47 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC17,07■□□□□ 0,32
Igkv8-28A0A0G2JE47 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC17,05■□□□□ 0,32
Igkv8-28A0A0G2JE47 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC17,03■□□□□ 0,32
Igkv8-28A0A0G2JE47 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC17,01■□□□□ 0,31
Igkv8-28A0A0G2JE47 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC17,01■□□□□ 0,31
Retrieved 100 of 76,532 protein–RNA pairs in 10,9 ms