RNA–Protein interactions for RNA: ENSMUST00000077489.11

Scn1a-201, Transcript of Sodium channel protein type 1 subunit alpha, mousemouse

APPRIS P3 TSL 5 BASIC

Gene Scn1a, Length 8,116 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1a-201ENSMUST00000077489 Trav13d-4A0A0G2JFX3 110 aa4.98□□□□□ -1.61
Scn1a-201ENSMUST00000077489 Pip4p1Q3TWL2 284 aa4.98□□□□□ -1.61
Scn1a-201ENSMUST00000077489 Usf3B2RUQ2 2221 aa4.98□□□□□ -1.61
Scn1a-201ENSMUST00000077489 P01728 117 aa4.97□□□□□ -1.61
Scn1a-201ENSMUST00000077489 MifP34884 115 aaKnown RBP4.97□□□□□ -1.61
Scn1a-201ENSMUST00000077489 Rpl39P62892 51 aa4.97□□□□□ -1.61
Scn1a-201ENSMUST00000077489 Ighv1-5A0A0A6YWG2 117 aa4.97□□□□□ -1.61
Scn1a-201ENSMUST00000077489 Igkv1-122A0A140T8M9 119 aa4.97□□□□□ -1.61
Scn1a-201ENSMUST00000077489 Fgf6P21658 208 aa4.97□□□□□ -1.61
Scn1a-201ENSMUST00000077489 Gm9913Q8BQQ2 135 aa4.97□□□□□ -1.61
Scn1a-201ENSMUST00000077489 Spink10Q8CAC8 162 aa4.97□□□□□ -1.61
Scn1a-201ENSMUST00000077489 Nckap5E9QAE1 1909 aa4.97□□□□□ -1.61
Scn1a-201ENSMUST00000077489 Ccdc179J3QM76 67 aa4.97□□□□□ -1.61
Scn1a-201ENSMUST00000077489 Fgfbp3Q1HCM0 245 aa4.97□□□□□ -1.61
Scn1a-201ENSMUST00000077489 Gm20726G3UX18 150 aa4.97□□□□□ -1.61
Scn1a-201ENSMUST00000077489 OdaphJ3QNT8 126 aa4.97□□□□□ -1.61
Scn1a-201ENSMUST00000077489 Q9CX25 107 aa4.97□□□□□ -1.61
Scn1a-201ENSMUST00000077489 Rp1l1Q8CGM2 1859 aa4.97□□□□□ -1.61
Scn1a-201ENSMUST00000077489 F5O88783 2183 aa4.97□□□□□ -1.61
Scn1a-201ENSMUST00000077489 Ebi3O35228 228 aa4.97□□□□□ -1.61
Scn1a-201ENSMUST00000077489 Gm10337F7DEP7 55 aa4.97□□□□□ -1.61
Scn1a-201ENSMUST00000077489 Col6a6Q8C6K9 2265 aa4.96□□□□□ -1.61
Scn1a-201ENSMUST00000077489 CtrlQ9ER05 264 aa4.96□□□□□ -1.61
Scn1a-201ENSMUST00000077489 Tcte2E9PY37 120 aa4.96□□□□□ -1.62
Scn1a-201ENSMUST00000077489 Ncor2Q9WU42 2472 aaKnown RBP4.96□□□□□ -1.62
Scn1a-201ENSMUST00000077489 Sprr3O09116 238 aa4.96□□□□□ -1.62
Scn1a-201ENSMUST00000077489 P01820 115 aa4.96□□□□□ -1.62
Scn1a-201ENSMUST00000077489 Med13Q5SWW4 2171 aa4.96□□□□□ -1.62
Scn1a-201ENSMUST00000077489 P06328 117 aa4.96□□□□□ -1.62
Scn1a-201ENSMUST00000077489 Eml6Q5SQM0 1958 aa4.96□□□□□ -1.62
Scn1a-201ENSMUST00000077489 Gm9949Q8C9F4 104 aa4.96□□□□□ -1.62
Scn1a-201ENSMUST00000077489 Cacna1aP97445 2368 aa4.96□□□□□ -1.62
Scn1a-201ENSMUST00000077489 Iglv1A0A075B663 117 aa4.96□□□□□ -1.62
Scn1a-201ENSMUST00000077489 Crip1P63254 77 aa4.96□□□□□ -1.62
Scn1a-201ENSMUST00000077489 Rpl39lQ9CQD0 51 aa4.95□□□□□ -1.62
Scn1a-201ENSMUST00000077489 Naa38Q9D2U5 125 aa4.95□□□□□ -1.62
Scn1a-201ENSMUST00000077489 Tnfrsf23Q9ER63 176 aa4.95□□□□□ -1.62
Scn1a-201ENSMUST00000077489 Ighv1-85A0A075B5Y6 117 aa4.95□□□□□ -1.62
Scn1a-201ENSMUST00000077489 BlcapP62951 87 aa4.95□□□□□ -1.62
Scn1a-201ENSMUST00000077489 Col6a4A2AX52 2309 aa4.95□□□□□ -1.62
Scn1a-201ENSMUST00000077489 Q8K1L6 76 aa4.95□□□□□ -1.62
Scn1a-201ENSMUST00000077489 Spry2Q9QXV8 315 aa4.95□□□□□ -1.62
Scn1a-201ENSMUST00000077489 Tfpi2O35536 230 aa4.95□□□□□ -1.62
Scn1a-201ENSMUST00000077489 Parp4E9PYK3 1969 aa4.95□□□□□ -1.62
Scn1a-201ENSMUST00000077489 Trav13n-1A0A0G2JEU8 110 aa4.95□□□□□ -1.62
Scn1a-201ENSMUST00000077489 Sec61gP60060 68 aa4.95□□□□□ -1.62
Scn1a-201ENSMUST00000077489 Rbx1P62878 108 aa4.95□□□□□ -1.62
Scn1a-201ENSMUST00000077489 Brk1Q91VR8 75 aa4.95□□□□□ -1.62
Scn1a-201ENSMUST00000077489 Tln2Q71LX4 2375 aa4.95□□□□□ -1.62
Scn1a-201ENSMUST00000077489 Cdpf1Q8R3A2 119 aa4.94□□□□□ -1.62
Scn1a-201ENSMUST00000077489 Ighv10-1A0A0B4J1J6 119 aa4.94□□□□□ -1.62
Scn1a-201ENSMUST00000077489 Vpreb3D3Z6J4 130 aa4.94□□□□□ -1.62
Scn1a-201ENSMUST00000077489 Cfc1P97766 202 aa4.94□□□□□ -1.62
Scn1a-201ENSMUST00000077489 Ighv2-6-8A0A0A6YWY9 116 aa4.94□□□□□ -1.62
Scn1a-201ENSMUST00000077489 Trbv13-1A0A0B4J1P8 112 aa4.94□□□□□ -1.62
Scn1a-201ENSMUST00000077489 Trav7-6A0A075B640 112 aa4.94□□□□□ -1.62
Scn1a-201ENSMUST00000077489 4930470P17RikQ9D542 155 aa4.94□□□□□ -1.62
Scn1a-201ENSMUST00000077489 9430015G10RikA2ASP7 199 aa4.94□□□□□ -1.62
Scn1a-201ENSMUST00000077489 CrygdP04342 174 aa4.94□□□□□ -1.62
Scn1a-201ENSMUST00000077489 Heatr5aQ5PRF0 2038 aa4.94□□□□□ -1.62
Scn1a-201ENSMUST00000077489 Plac8l1Q08EJ0 177 aa4.94□□□□□ -1.62
Scn1a-201ENSMUST00000077489 Ypel4Q65Z93 127 aa4.94□□□□□ -1.62
Scn1a-201ENSMUST00000077489 Ighv8-5A0A0A6YY60 119 aa4.93□□□□□ -1.62
Scn1a-201ENSMUST00000077489 Gm3618D3Z4P5 127 aa4.93□□□□□ -1.62
Scn1a-201ENSMUST00000077489 Reg3bP35230 175 aa4.93□□□□□ -1.62
Scn1a-201ENSMUST00000077489 CnfnQ6PCW6 111 aa4.93□□□□□ -1.62
Scn1a-201ENSMUST00000077489 P01658 132 aa4.93□□□□□ -1.62
Scn1a-201ENSMUST00000077489 P01659 112 aa4.93□□□□□ -1.62
Scn1a-201ENSMUST00000077489 Gm8251F6VUT6 1994 aa4.93□□□□□ -1.62
Scn1a-201ENSMUST00000077489 Ighv1-63A0A075B5X2 117 aa4.93□□□□□ -1.62
Scn1a-201ENSMUST00000077489 Trav13-4-dv7A0A075B6C2 110 aa4.93□□□□□ -1.62
Scn1a-201ENSMUST00000077489 Prp2P05143 317 aa4.93□□□□□ -1.62
Scn1a-201ENSMUST00000077489 Chchd7Q8K2Q5 85 aa4.93□□□□□ -1.62
Scn1a-201ENSMUST00000077489 Ighv1-82A0A0G2JEU7 117 aa4.93□□□□□ -1.62
Scn1a-201ENSMUST00000077489 Ube2d4D3YUH6 135 aa4.93□□□□□ -1.62
Scn1a-201ENSMUST00000077489 Gm10226O88253 85 aa4.93□□□□□ -1.62
Scn1a-201ENSMUST00000077489 9230102O04RikA2ASX7 82 aa4.92□□□□□ -1.62
Scn1a-201ENSMUST00000077489 Gm42674D3YUT9 64 aa4.92□□□□□ -1.62
Scn1a-201ENSMUST00000077489 Gm10401E9Q3K6 71 aa4.92□□□□□ -1.62
Scn1a-201ENSMUST00000077489 Ptprz1B9EKR1 2312 aa4.92□□□□□ -1.62
Scn1a-201ENSMUST00000077489 Igkv3-4A0A140T8Q4 119 aa4.92□□□□□ -1.62
Scn1a-201ENSMUST00000077489 Tcl1b5P56845 121 aa4.92□□□□□ -1.62
Scn1a-201ENSMUST00000077489 DysfQ9ESD7 2090 aa4.92□□□□□ -1.62
Scn1a-201ENSMUST00000077489 Klk9Q32M27 251 aa4.92□□□□□ -1.62
Scn1a-201ENSMUST00000077489 Ighv3-3A0A0A6YWL2 116 aa4.92□□□□□ -1.62
Scn1a-201ENSMUST00000077489 Vpreb1P13372 142 aa4.92□□□□□ -1.62
Scn1a-201ENSMUST00000077489 Wnk1P83741 2377 aa4.92□□□□□ -1.62
Scn1a-201ENSMUST00000077489 Trav13d-1A0A075B606 110 aa4.92□□□□□ -1.62
Scn1a-201ENSMUST00000077489 Higd2aQ9CQJ1 106 aa4.92□□□□□ -1.62
Scn1a-201ENSMUST00000077489 Cox8cA6H666 72 aa4.91□□□□□ -1.62
Scn1a-201ENSMUST00000077489 PpdpfQ9CR37 115 aa4.91□□□□□ -1.62
Scn1a-201ENSMUST00000077489 Igkv1-88A0A140T8N1 120 aa4.91□□□□□ -1.62
Scn1a-201ENSMUST00000077489 E130114P18RikF6S0S7 154 aa4.91□□□□□ -1.62
Scn1a-201ENSMUST00000077489 Gm10322F7D7I4 111 aa4.91□□□□□ -1.62
Scn1a-201ENSMUST00000077489 A130051J06RikQ8CAU1 227 aa4.91□□□□□ -1.62
Scn1a-201ENSMUST00000077489 P01747 120 aa4.91□□□□□ -1.62
Scn1a-201ENSMUST00000077489 Igkv2-109A0A075B5K6 120 aa4.91□□□□□ -1.62
Scn1a-201ENSMUST00000077489 Ndufb1P0DN34 57 aa4.91□□□□□ -1.62
Scn1a-201ENSMUST00000077489 FshbQ60687 130 aa4.91□□□□□ -1.62
Scn1a-201ENSMUST00000077489 Q9D131 166 aa4.91□□□□□ -1.62
Retrieved 100 of 22,080 RNA–protein pairs in 55.9 ms