Protein–RNA interactions for Protein: A0A0A6YWG2

Ighv1-5, Immunoglobulin heavy variable V1-5 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-5A0A0A6YWG2 Gm25239-201ENSMUST00000174915 86 ntBASIC27,12■■□□□ 1,93
Ighv1-5A0A0A6YWG2 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC25■■□□□ 1,59
Ighv1-5A0A0A6YWG2 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC24,73■■□□□ 1,55
Ighv1-5A0A0A6YWG2 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC24,36■■□□□ 1,49
Ighv1-5A0A0A6YWG2 Gm15042-201ENSMUST00000120212 883 ntBASIC23,89■■□□□ 1,41
Ighv1-5A0A0A6YWG2 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC23,53■■□□□ 1,36
Ighv1-5A0A0A6YWG2 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC23,48■■□□□ 1,35
Ighv1-5A0A0A6YWG2 Gm24109-201ENSMUST00000175489 103 ntBASIC23,39■■□□□ 1,33
Ighv1-5A0A0A6YWG2 Gm15045-201ENSMUST00000117359 883 ntBASIC23,32■■□□□ 1,32
Ighv1-5A0A0A6YWG2 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC23,14■■□□□ 1,3
Ighv1-5A0A0A6YWG2 Psd-208ENSMUST00000224556 2034 ntBASIC22,94■■□□□ 1,26
Ighv1-5A0A0A6YWG2 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC22,88■■□□□ 1,25
Ighv1-5A0A0A6YWG2 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC22,83■■□□□ 1,25
Ighv1-5A0A0A6YWG2 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC22,78■■□□□ 1,24
Ighv1-5A0A0A6YWG2 Gm23366-201ENSMUST00000175022 89 ntBASIC22,72■■□□□ 1,23
Ighv1-5A0A0A6YWG2 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC22,59■■□□□ 1,21
Ighv1-5A0A0A6YWG2 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC22,56■■□□□ 1,2
Ighv1-5A0A0A6YWG2 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC22,4■■□□□ 1,18
Ighv1-5A0A0A6YWG2 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC22,34■■□□□ 1,17
Ighv1-5A0A0A6YWG2 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC22,24■■□□□ 1,15
Ighv1-5A0A0A6YWG2 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC22,17■■□□□ 1,14
Ighv1-5A0A0A6YWG2 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC22,11■■□□□ 1,13
Ighv1-5A0A0A6YWG2 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC22,1■■□□□ 1,13
Ighv1-5A0A0A6YWG2 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC22,08■■□□□ 1,12
Ighv1-5A0A0A6YWG2 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC22,01■■□□□ 1,11
Ighv1-5A0A0A6YWG2 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC21,94■■□□□ 1,1
Ighv1-5A0A0A6YWG2 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC21,92■■□□□ 1,1
Ighv1-5A0A0A6YWG2 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21,92■■□□□ 1,1
Ighv1-5A0A0A6YWG2 AC153911.1-202ENSMUST00000218534 1034 ntBASIC21,9■■□□□ 1,1
Ighv1-5A0A0A6YWG2 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC21,9■■□□□ 1,1
Ighv1-5A0A0A6YWG2 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC21,86■■□□□ 1,09
Ighv1-5A0A0A6YWG2 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC21,82■■□□□ 1,08
Ighv1-5A0A0A6YWG2 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC21,79■■□□□ 1,08
Ighv1-5A0A0A6YWG2 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC21,77■■□□□ 1,08
Ighv1-5A0A0A6YWG2 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC21,66■■□□□ 1,06
Ighv1-5A0A0A6YWG2 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC21,57■■□□□ 1,04
Ighv1-5A0A0A6YWG2 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC21,57■■□□□ 1,04
Ighv1-5A0A0A6YWG2 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC21,54■■□□□ 1,04
Ighv1-5A0A0A6YWG2 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC21,51■■□□□ 1,03
Ighv1-5A0A0A6YWG2 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC21,51■■□□□ 1,03
Ighv1-5A0A0A6YWG2 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC21,48■■□□□ 1,03
Ighv1-5A0A0A6YWG2 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC21,43■■□□□ 1,02
Ighv1-5A0A0A6YWG2 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC21,41■■□□□ 1,02
Ighv1-5A0A0A6YWG2 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC21,39■■□□□ 1,01
Ighv1-5A0A0A6YWG2 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC21,34■■□□□ 1,01
Ighv1-5A0A0A6YWG2 Gm25238-201ENSMUST00000174914 89 ntBASIC21,32■■□□□ 1
Ighv1-5A0A0A6YWG2 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC21,32■■□□□ 1
Ighv1-5A0A0A6YWG2 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC21,26■□□□□ 0,99
Ighv1-5A0A0A6YWG2 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC21,15■□□□□ 0,98
Ighv1-5A0A0A6YWG2 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC21,13■□□□□ 0,97
Ighv1-5A0A0A6YWG2 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC21,11■□□□□ 0,97
Ighv1-5A0A0A6YWG2 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC21,01■□□□□ 0,95
Ighv1-5A0A0A6YWG2 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0,95
Ighv1-5A0A0A6YWG2 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20,98■□□□□ 0,95
Ighv1-5A0A0A6YWG2 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC20,97■□□□□ 0,95
Ighv1-5A0A0A6YWG2 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC20,96■□□□□ 0,95
Ighv1-5A0A0A6YWG2 Gm27325-201ENSMUST00000175467 74 ntBASIC20,92■□□□□ 0,94
Ighv1-5A0A0A6YWG2 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC20,92■□□□□ 0,94
Ighv1-5A0A0A6YWG2 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC20,88■□□□□ 0,93
Ighv1-5A0A0A6YWG2 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC20,8■□□□□ 0,92
Ighv1-5A0A0A6YWG2 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC20,77■□□□□ 0,92
Ighv1-5A0A0A6YWG2 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC20,75■□□□□ 0,91
Ighv1-5A0A0A6YWG2 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC20,75■□□□□ 0,91
Ighv1-5A0A0A6YWG2 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC20,72■□□□□ 0,91
Ighv1-5A0A0A6YWG2 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC20,69■□□□□ 0,9
Ighv1-5A0A0A6YWG2 Gm42596-201ENSMUST00000196305 1958 ntBASIC20,66■□□□□ 0,9
Ighv1-5A0A0A6YWG2 Gm10524-201ENSMUST00000181931 1893 ntBASIC20,65■□□□□ 0,9
Ighv1-5A0A0A6YWG2 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC20,65■□□□□ 0,9
Ighv1-5A0A0A6YWG2 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC20,65■□□□□ 0,9
Ighv1-5A0A0A6YWG2 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC20,65■□□□□ 0,9
Ighv1-5A0A0A6YWG2 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC20,62■□□□□ 0,89
Ighv1-5A0A0A6YWG2 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC20,61■□□□□ 0,89
Ighv1-5A0A0A6YWG2 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC20,58■□□□□ 0,88
Ighv1-5A0A0A6YWG2 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC20,57■□□□□ 0,88
Ighv1-5A0A0A6YWG2 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC20,56■□□□□ 0,88
Ighv1-5A0A0A6YWG2 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC20,55■□□□□ 0,88
Ighv1-5A0A0A6YWG2 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC20,54■□□□□ 0,88
Ighv1-5A0A0A6YWG2 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC20,54■□□□□ 0,88
Ighv1-5A0A0A6YWG2 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC20,54■□□□□ 0,88
Ighv1-5A0A0A6YWG2 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC20,52■□□□□ 0,88
Ighv1-5A0A0A6YWG2 Rab21-202ENSMUST00000218831 843 ntBASIC20,49■□□□□ 0,87
Ighv1-5A0A0A6YWG2 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC20,45■□□□□ 0,86
Ighv1-5A0A0A6YWG2 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC20,45■□□□□ 0,86
Ighv1-5A0A0A6YWG2 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC20,44■□□□□ 0,86
Ighv1-5A0A0A6YWG2 Gm25262-201ENSMUST00000174934 133 ntBASIC20,43■□□□□ 0,86
Ighv1-5A0A0A6YWG2 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC20,4■□□□□ 0,86
Ighv1-5A0A0A6YWG2 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC20,39■□□□□ 0,85
Ighv1-5A0A0A6YWG2 CT025624.2-201ENSMUST00000223609 1909 ntBASIC20,38■□□□□ 0,85
Ighv1-5A0A0A6YWG2 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC20,37■□□□□ 0,85
Ighv1-5A0A0A6YWG2 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC20,36■□□□□ 0,85
Ighv1-5A0A0A6YWG2 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC20,36■□□□□ 0,85
Ighv1-5A0A0A6YWG2 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC20,31■□□□□ 0,84
Ighv1-5A0A0A6YWG2 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC20,3■□□□□ 0,84
Ighv1-5A0A0A6YWG2 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC20,3■□□□□ 0,84
Ighv1-5A0A0A6YWG2 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC20,29■□□□□ 0,84
Ighv1-5A0A0A6YWG2 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC20,21■□□□□ 0,83
Ighv1-5A0A0A6YWG2 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC20,18■□□□□ 0,82
Ighv1-5A0A0A6YWG2 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC20,18■□□□□ 0,82
Ighv1-5A0A0A6YWG2 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC20,18■□□□□ 0,82
Ighv1-5A0A0A6YWG2 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC20,16■□□□□ 0,82
Retrieved 100 of 76,532 protein–RNA pairs in 32,2 ms