RNA–Protein interactions for RNA: ENSMUST00000077489.11

Scn1a-201, Transcript of Sodium channel protein type 1 subunit alpha, mousemouse

APPRIS P3 TSL 5 BASIC

Gene Scn1a, Length 8,116 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1a-201ENSMUST00000077489 Rhox8Q6VSS7 320 aa11.31□□□□□ -0.6
Scn1a-201ENSMUST00000077489 Rpgrip1Q9EPQ2 1331 aa10.8□□□□□ -0.68
Scn1a-201ENSMUST00000077489 Cngb1E1AZ71 1325 aa10.35□□□□□ -0.75
Scn1a-201ENSMUST00000077489 Las1lA2BE28 776 aaKnown RBP10.31□□□□□ -0.76
Scn1a-201ENSMUST00000077489 Pelp1Q9DBD5 1123 aaKnown RBP10.19□□□□□ -0.78
Scn1a-201ENSMUST00000077489 NischQ80TM9 1593 aa10.06□□□□□ -0.8
Scn1a-201ENSMUST00000077489 Esf1Q3V1V3 845 aaKnown RBP10.03□□□□□ -0.8
Scn1a-201ENSMUST00000077489 Trim41Q5NCC3 630 aa10.02□□□□□ -0.81
Scn1a-201ENSMUST00000077489 Wdr66E9Q743 1299 aa10□□□□□ -0.81
Scn1a-201ENSMUST00000077489 Ehmt2Q9Z148 1263 aaKnown RBP9.97□□□□□ -0.81
Scn1a-201ENSMUST00000077489 Ccdc136Q3TVA9 1136 aa9.94□□□□□ -0.82
Scn1a-201ENSMUST00000077489 Rtl1Q7M732 1744 aa9.9□□□□□ -0.82
Scn1a-201ENSMUST00000077489 Ccdc180J3QNE4 1664 aa9.88□□□□□ -0.83
Scn1a-201ENSMUST00000077489 Ube2uB1AUC4 352 aa9.87□□□□□ -0.83
Scn1a-201ENSMUST00000077489 Npm2Q80W85 207 aa9.86□□□□□ -0.83
Scn1a-201ENSMUST00000077489 Zeb1Q64318 1117 aa9.84□□□□□ -0.83
Scn1a-201ENSMUST00000077489 NefmP08553 848 aa9.79□□□□□ -0.84
Scn1a-201ENSMUST00000077489 Stra8P70278 393 aa9.78□□□□□ -0.84
Scn1a-201ENSMUST00000077489 Acin1Q9JIX8 1338 aaKnown RBP9.77□□□□□ -0.85
Scn1a-201ENSMUST00000077489 Gab3Q8BSM5 595 aa9.77□□□□□ -0.85
Scn1a-201ENSMUST00000077489 CenpbP27790 599 aa9.73□□□□□ -0.85
Scn1a-201ENSMUST00000077489 Myt1lP97500 1187 aa9.66□□□□□ -0.86
Scn1a-201ENSMUST00000077489 HrcG5E8J6 738 aa9.63□□□□□ -0.87
Scn1a-201ENSMUST00000077489 Amer1Q7TS75 1132 aa9.56□□□□□ -0.88
Scn1a-201ENSMUST00000077489 Myt1Q8CFC2 1127 aa9.54□□□□□ -0.88
Scn1a-201ENSMUST00000077489 UbtfP25976 765 aaKnown RBP9.49□□□□□ -0.89
Scn1a-201ENSMUST00000077489 Tnnt3Q9QZ47 272 aa9.49□□□□□ -0.89
Scn1a-201ENSMUST00000077489 Anp32bQ9EST5 272 aaKnown RBP9.44□□□□□ -0.9
Scn1a-201ENSMUST00000077489 Cdk11bP24788 784 aaKnown RBP9.42□□□□□ -0.9
Scn1a-201ENSMUST00000077489 Abcc9P70170 1546 aa9.4□□□□□ -0.91
Scn1a-201ENSMUST00000077489 NrdcQ8BHG1 1161 aa9.36□□□□□ -0.91
Scn1a-201ENSMUST00000077489 Zcchc6Q5BLK4 1491 aaKnown RBP9.35□□□□□ -0.91
Scn1a-201ENSMUST00000077489 Rtl5Q5DTT4 599 aa9.34□□□□□ -0.91
Scn1a-201ENSMUST00000077489 NeflP08551 543 aa9.33□□□□□ -0.92
Scn1a-201ENSMUST00000077489 4930567H17RikQ3V0K5 233 aa9.33□□□□□ -0.92
Scn1a-201ENSMUST00000077489 Slc24a1Q91WD8 1130 aa9.31□□□□□ -0.92
Scn1a-201ENSMUST00000077489 Nop58Q6DFW4 536 aaKnown RBP9.26□□□□□ -0.93
Scn1a-201ENSMUST00000077489 Il27Q8K3I6 234 aa9.26□□□□□ -0.93
Scn1a-201ENSMUST00000077489 TonslQ6NZL6 1363 aa9.25□□□□□ -0.93
Scn1a-201ENSMUST00000077489 NclP09405 707 aaKnown RBP9.25□□□□□ -0.93
Scn1a-201ENSMUST00000077489 Pcgf6Q99NA9 353 aa9.24□□□□□ -0.93
Scn1a-201ENSMUST00000077489 4933416C03RikQ3V063 378 aa9.22□□□□□ -0.93
Scn1a-201ENSMUST00000077489 Fam50aQ9WV03 339 aaKnown RBP9.22□□□□□ -0.93
Scn1a-201ENSMUST00000077489 Os9Q8K2C7 672 aa9.17□□□□□ -0.94
Scn1a-201ENSMUST00000077489 Ap3b1Q9Z1T1 1105 aa9.17□□□□□ -0.94
Scn1a-201ENSMUST00000077489 DiexfQ8BTT6 772 aaKnown RBP9.15□□□□□ -0.94
Scn1a-201ENSMUST00000077489 Hdac5Q9Z2V6 1113 aa9.15□□□□□ -0.94
Scn1a-201ENSMUST00000077489 Neurod1Q60867 357 aa9.14□□□□□ -0.95
Scn1a-201ENSMUST00000077489 Abcc8B2RUS7 1588 aa9.12□□□□□ -0.95
Scn1a-201ENSMUST00000077489 Eif5bQ05D44 1216 aaKnown RBP9.1□□□□□ -0.95
Scn1a-201ENSMUST00000077489 ClspnQ80YR7 1315 aa9.08□□□□□ -0.96
Scn1a-201ENSMUST00000077489 Mier1Q5UAK0 511 aa9.07□□□□□ -0.96
Scn1a-201ENSMUST00000077489 Brd4Q9ESU6 1400 aaKnown RBP9.06□□□□□ -0.96
Scn1a-201ENSMUST00000077489 Anp32aO35381 247 aa9.05□□□□□ -0.96
Scn1a-201ENSMUST00000077489 Ttbk1Q6PCN3 1308 aa9.05□□□□□ -0.96
Scn1a-201ENSMUST00000077489 Gm35339A0A140LHH9 1649 aa9.04□□□□□ -0.96
Scn1a-201ENSMUST00000077489 Supt5hO55201 1082 aaKnown RBP9.04□□□□□ -0.96
Scn1a-201ENSMUST00000077489 Npm1Q61937 292 aaKnown RBP9.03□□□□□ -0.96
Scn1a-201ENSMUST00000077489 Dcaf1Q80TR8 1506 aa9.03□□□□□ -0.96
Scn1a-201ENSMUST00000077489 Ccer2J3QPU5 274 aa9□□□□□ -0.97
Scn1a-201ENSMUST00000077489 Cep164Q5DU05 1446 aa8.99□□□□□ -0.97
Scn1a-201ENSMUST00000077489 Nlrp6Q91WS2 869 aa8.94□□□□□ -0.98
Scn1a-201ENSMUST00000077489 Rb1cc1Q9ESK9 1588 aa8.91□□□□□ -0.98
Scn1a-201ENSMUST00000077489 Upf2A2AT37 1269 aaKnown RBP8.9□□□□□ -0.98
Scn1a-201ENSMUST00000077489 Clip1Q922J3 1391 aa8.89□□□□□ -0.99
Scn1a-201ENSMUST00000077489 Plekhg3Q4VAC9 1341 aa8.88□□□□□ -0.99
Scn1a-201ENSMUST00000077489 Gm13697A2AK42 830 aa8.88□□□□□ -0.99
Scn1a-201ENSMUST00000077489 Lmod2Q3UHZ5 550 aa8.88□□□□□ -0.99
Scn1a-201ENSMUST00000077489 Hnrnpul2Q00PI9 745 aaKnown RBP8.85□□□□□ -0.99
Scn1a-201ENSMUST00000077489 Ppargc1bQ8VHJ7 1014 aa8.84□□□□□ -0.99
Scn1a-201ENSMUST00000077489 Anks4bQ8K3X6 423 aa8.83□□□□□ -1
Scn1a-201ENSMUST00000077489 DaxxO35613 739 aa8.81□□□□□ -1
Scn1a-201ENSMUST00000077489 Aplp2Q06335 707 aa8.8□□□□□ -1
Scn1a-201ENSMUST00000077489 Clstn2Q9ER65 966 aa8.8□□□□□ -1
Scn1a-201ENSMUST00000077489 Erich6D3Z6S9 713 aa8.79□□□□□ -1
Scn1a-201ENSMUST00000077489 Ccdc9Q8VC31 543 aaKnown RBP8.78□□□□□ -1
Scn1a-201ENSMUST00000077489 Zbtb7cQ8VCZ7 619 aa8.77□□□□□ -1.01
Scn1a-201ENSMUST00000077489 Atp1b4Q99ME6 356 aa8.77□□□□□ -1.01
Scn1a-201ENSMUST00000077489 NacadQ5SWP3 1504 aa8.76□□□□□ -1.01
Scn1a-201ENSMUST00000077489 Gm13695A2AK44 830 aa8.72□□□□□ -1.01
Scn1a-201ENSMUST00000077489 Polr3glQ8R0C0 218 aa8.72□□□□□ -1.01
Scn1a-201ENSMUST00000077489 Calr4Q3TQS0 420 aa8.72□□□□□ -1.01
Scn1a-201ENSMUST00000077489 Baz1aO88379 1555 aa8.72□□□□□ -1.01
Scn1a-201ENSMUST00000077489 Sall2Q9QX96 1004 aa8.68□□□□□ -1.02
Scn1a-201ENSMUST00000077489 Hsp90aa1P07901 733 aaKnown RBP8.67□□□□□ -1.02
Scn1a-201ENSMUST00000077489 Golga3P55937 1487 aa8.67□□□□□ -1.02
Scn1a-201ENSMUST00000077489 BlmO88700 1416 aa8.67□□□□□ -1.02
Scn1a-201ENSMUST00000077489 Chic1Q8CBW7 227 aa8.67□□□□□ -1.02
Scn1a-201ENSMUST00000077489 Ubl4bQ9CQ84 188 aa8.66□□□□□ -1.02
Scn1a-201ENSMUST00000077489 Ercc6F8VPZ5 1481 aa8.66□□□□□ -1.02
Scn1a-201ENSMUST00000077489 Wdr43Q6ZQL4 677 aaKnown RBP8.65□□□□□ -1.02
Scn1a-201ENSMUST00000077489 Ifnlr1Q8CGK5 535 aa8.65□□□□□ -1.02
Scn1a-201ENSMUST00000077489 Rsf1E9PWW9 1441 aaKnown RBP8.64□□□□□ -1.03
Scn1a-201ENSMUST00000077489 Ppp4r2Q0VGB7 417 aa8.64□□□□□ -1.03
Scn1a-201ENSMUST00000077489 Zbtb4Q5F293 982 aa8.64□□□□□ -1.03
Scn1a-201ENSMUST00000077489 Ccdc18Q640L5 1455 aa8.64□□□□□ -1.03
Scn1a-201ENSMUST00000077489 Setd5Q5XJV7 1441 aa8.63□□□□□ -1.03
Scn1a-201ENSMUST00000077489 Eid3Q3V124 375 aa8.63□□□□□ -1.03
Scn1a-201ENSMUST00000077489 Csrnp3P59055 597 aa8.61□□□□□ -1.03
Scn1a-201ENSMUST00000077489 Eea1Q8BL66 1411 aa8.6□□□□□ -1.03
Retrieved 100 of 22,080 RNA–protein pairs in 132.8 ms