Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Gm25239-201ENSMUST00000174915 86 ntBASIC36,85■■■■□ 3,49
Cacna1aP97445 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC34,16■■■■□ 3,06
Cacna1aP97445 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC33,59■■■□□ 2,97
Cacna1aP97445 Gm24109-201ENSMUST00000175489 103 ntBASIC32,21■■■□□ 2,75
Cacna1aP97445 Gm15042-201ENSMUST00000120212 883 ntBASIC31,75■■■□□ 2,67
Cacna1aP97445 Gm15045-201ENSMUST00000117359 883 ntBASIC31,16■■■□□ 2,58
Cacna1aP97445 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC31,14■■■□□ 2,58
Cacna1aP97445 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC30,89■■■□□ 2,54
Cacna1aP97445 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC30,81■■■□□ 2,52
Cacna1aP97445 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC30,77■■■□□ 2,52
Cacna1aP97445 Gm23366-201ENSMUST00000175022 89 ntBASIC30,56■■■□□ 2,48
Cacna1aP97445 AC153911.1-202ENSMUST00000218534 1034 ntBASIC30,17■■■□□ 2,42
Cacna1aP97445 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC30,1■■■□□ 2,41
Cacna1aP97445 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC29,98■■■□□ 2,39
Cacna1aP97445 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC29,92■■■□□ 2,38
Cacna1aP97445 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC29,84■■■□□ 2,37
Cacna1aP97445 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC29,77■■■□□ 2,36
Cacna1aP97445 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC29,61■■■□□ 2,33
Cacna1aP97445 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC29,38■■■□□ 2,29
Cacna1aP97445 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC29,35■■■□□ 2,29
Cacna1aP97445 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC29,26■■■□□ 2,27
Cacna1aP97445 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC29,18■■■□□ 2,26
Cacna1aP97445 Gm25238-201ENSMUST00000174914 89 ntBASIC29,18■■■□□ 2,26
Cacna1aP97445 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC29,15■■■□□ 2,26
Cacna1aP97445 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC28,78■■■□□ 2,2
Cacna1aP97445 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC28,7■■■□□ 2,19
Cacna1aP97445 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC28,7■■■□□ 2,18
Cacna1aP97445 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC28,68■■■□□ 2,18
Cacna1aP97445 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC28,58■■■□□ 2,17
Cacna1aP97445 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC28,52■■■□□ 2,16
Cacna1aP97445 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC28,52■■■□□ 2,16
Cacna1aP97445 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC28,46■■■□□ 2,15
Cacna1aP97445 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC28,43■■■□□ 2,14
Cacna1aP97445 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC28,39■■■□□ 2,14
Cacna1aP97445 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC28,33■■■□□ 2,13
Cacna1aP97445 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC28,32■■■□□ 2,12
Cacna1aP97445 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC28,28■■■□□ 2,12
Cacna1aP97445 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC28,24■■■□□ 2,11
Cacna1aP97445 Gm25262-201ENSMUST00000174934 133 ntBASIC28,16■■■□□ 2,1
Cacna1aP97445 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC28,1■■■□□ 2,09
Cacna1aP97445 Gm27325-201ENSMUST00000175467 74 ntBASIC27,9■■■□□ 2,06
Cacna1aP97445 Gm26115-201ENSMUST00000175605 87 ntBASIC27,9■■■□□ 2,06
Cacna1aP97445 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC27,89■■■□□ 2,06
Cacna1aP97445 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC27,84■■■□□ 2,05
Cacna1aP97445 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC27,83■■■□□ 2,05
Cacna1aP97445 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC27,82■■■□□ 2,04
Cacna1aP97445 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC27,81■■■□□ 2,04
Cacna1aP97445 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC27,81■■■□□ 2,04
Cacna1aP97445 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC27,79■■■□□ 2,04
Cacna1aP97445 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC27,75■■■□□ 2,03
Cacna1aP97445 Gm8109-201ENSMUST00000194076 746 ntBASIC27,74■■■□□ 2,03
Cacna1aP97445 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC27,74■■■□□ 2,03
Cacna1aP97445 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC27,6■■■□□ 2,01
Cacna1aP97445 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC27,57■■■□□ 2
Cacna1aP97445 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC27,53■■■□□ 2
Cacna1aP97445 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC27,53■■■□□ 2
Cacna1aP97445 Rab21-202ENSMUST00000218831 843 ntBASIC27,53■■■□□ 2
Cacna1aP97445 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC27,43■■□□□ 1,98
Cacna1aP97445 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC27,39■■□□□ 1,98
Cacna1aP97445 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC27,27■■□□□ 1,96
Cacna1aP97445 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC27,24■■□□□ 1,95
Cacna1aP97445 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC27,21■■□□□ 1,95
Cacna1aP97445 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC27,21■■□□□ 1,95
Cacna1aP97445 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC27,2■■□□□ 1,94
Cacna1aP97445 Psd-208ENSMUST00000224556 2034 ntBASIC27,15■■□□□ 1,94
Cacna1aP97445 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC27,13■■□□□ 1,93
Cacna1aP97445 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC27,06■■□□□ 1,92
Cacna1aP97445 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC27,06■■□□□ 1,92
Cacna1aP97445 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC27,03■■□□□ 1,92
Cacna1aP97445 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC27■■□□□ 1,91
Cacna1aP97445 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC26,92■■□□□ 1,9
Cacna1aP97445 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC26,86■■□□□ 1,89
Cacna1aP97445 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC26,86■■□□□ 1,89
Cacna1aP97445 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC26,86■■□□□ 1,89
Cacna1aP97445 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC26,81■■□□□ 1,88
Cacna1aP97445 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC26,79■■□□□ 1,88
Cacna1aP97445 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC26,76■■□□□ 1,88
Cacna1aP97445 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC26,75■■□□□ 1,87
Cacna1aP97445 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC26,73■■□□□ 1,87
Cacna1aP97445 Gm17082-201ENSMUST00000166043 1091 ntBASIC26,72■■□□□ 1,87
Cacna1aP97445 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC26,7■■□□□ 1,86
Cacna1aP97445 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC26,69■■□□□ 1,86
Cacna1aP97445 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC26,68■■□□□ 1,86
Cacna1aP97445 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC26,59■■□□□ 1,85
Cacna1aP97445 Gm24804-201ENSMUST00000174982 85 ntBASIC26,55■■□□□ 1,84
Cacna1aP97445 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC26,54■■□□□ 1,84
Cacna1aP97445 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC26,5■■□□□ 1,83
Cacna1aP97445 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC26,49■■□□□ 1,83
Cacna1aP97445 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC26,48■■□□□ 1,83
Cacna1aP97445 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC26,46■■□□□ 1,83
Cacna1aP97445 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC26,43■■□□□ 1,82
Cacna1aP97445 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC26,39■■□□□ 1,82
Cacna1aP97445 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC26,39■■□□□ 1,82
Cacna1aP97445 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC26,38■■□□□ 1,81
Cacna1aP97445 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC26,37■■□□□ 1,81
Cacna1aP97445 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC26,37■■□□□ 1,81
Cacna1aP97445 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC26,36■■□□□ 1,81
Cacna1aP97445 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC26,35■■□□□ 1,81
Cacna1aP97445 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC26,34■■□□□ 1,81
Cacna1aP97445 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC26,34■■□□□ 1,81
Retrieved 100 of 76,532 protein–RNA pairs in 11 ms