RNA–Protein interactions for RNA: ENSMUST00000055262.12

Vti1b-201, Transcript of Vesicle transport through interaction with t-SNAREs homolog 1B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vti1b, Length 1,490 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1b-201ENSMUST00000055262 March3Q8BRX9 218 aa12.8□□□□□ -0.36
Vti1b-201ENSMUST00000055262 Snai3Q9QY31 287 aa12.8□□□□□ -0.36
Vti1b-201ENSMUST00000055262 Tcf24V9GWT9 166 aa12.8□□□□□ -0.36
Vti1b-201ENSMUST00000055262 TgO08710 2766 aa12.8□□□□□ -0.36
Vti1b-201ENSMUST00000055262 Umad1E0CX23 159 aa12.79□□□□□ -0.36
Vti1b-201ENSMUST00000055262 Adcyap1O70176 175 aa12.79□□□□□ -0.36
Vti1b-201ENSMUST00000055262 F11rO88792 300 aa12.79□□□□□ -0.36
Vti1b-201ENSMUST00000055262 Rpl32P62911 135 aaKnown RBP12.79□□□□□ -0.36
Vti1b-201ENSMUST00000055262 Shisal1Q0VBP7 198 aa12.79□□□□□ -0.36
Vti1b-201ENSMUST00000055262 Polr2kQ63871 58 aa12.79□□□□□ -0.36
Vti1b-201ENSMUST00000055262 Q8CF25 301 aa12.79□□□□□ -0.36
Vti1b-201ENSMUST00000055262 AplnQ9R0R4 77 aa12.79□□□□□ -0.36
Vti1b-201ENSMUST00000055262 P01736 120 aa12.78□□□□□ -0.36
Vti1b-201ENSMUST00000055262 Vmo1Q5SXG7 201 aa12.78□□□□□ -0.36
Vti1b-201ENSMUST00000055262 Cox11Q6P8I6 275 aa12.78□□□□□ -0.36
Vti1b-201ENSMUST00000055262 Map1lc3aQ91VR7 121 aa12.78□□□□□ -0.36
Vti1b-201ENSMUST00000055262 Gm15294V9GXA7 121 aa12.78□□□□□ -0.36
Vti1b-201ENSMUST00000055262 Gm43218A0A0G2JGT0 114 aa12.78□□□□□ -0.36
Vti1b-201ENSMUST00000055262 Megf9Q8BH27 600 aa12.78□□□□□ -0.36
Vti1b-201ENSMUST00000055262 Atp5lQ9CPQ8 103 aa12.78□□□□□ -0.36
Vti1b-201ENSMUST00000055262 Trav16d-dv11A0A075B617 117 aa12.77□□□□□ -0.37
Vti1b-201ENSMUST00000055262 Gm17472A0A075B683 117 aa12.77□□□□□ -0.37
Vti1b-201ENSMUST00000055262 Lgals6O54891 301 aa12.77□□□□□ -0.37
Vti1b-201ENSMUST00000055262 Lamtor2Q9JHS3 125 aa12.77□□□□□ -0.37
Vti1b-201ENSMUST00000055262 Olfr869E9PX82 323 aa12.76□□□□□ -0.37
Vti1b-201ENSMUST00000055262 Gm10271F6WY25 52 aa12.76□□□□□ -0.37
Vti1b-201ENSMUST00000055262 Nat8f4G5E8L3 226 aa12.76□□□□□ -0.37
Vti1b-201ENSMUST00000055262 TbpP29037 316 aa12.76□□□□□ -0.37
Vti1b-201ENSMUST00000055262 Ceacam15A0A0B4J1L0 234 aa12.74□□□□□ -0.37
Vti1b-201ENSMUST00000055262 Trav14n-2A0A0G2JDF5 121 aa12.74□□□□□ -0.37
Vti1b-201ENSMUST00000055262 Trbv13-2A0A140T8N6 113 aa12.74□□□□□ -0.37
Vti1b-201ENSMUST00000055262 TtrP07309 147 aa12.74□□□□□ -0.37
Vti1b-201ENSMUST00000055262 Olfr983Q8VG90 315 aa12.74□□□□□ -0.37
Vti1b-201ENSMUST00000055262 Dync2h1Q45VK7 4306 aa12.74□□□□□ -0.37
Vti1b-201ENSMUST00000055262 Tcrg-C1A0A075B5Z0 172 aa12.73□□□□□ -0.37
Vti1b-201ENSMUST00000055262 Gm45623A0A1B0GSF6 103 aa12.73□□□□□ -0.37
Vti1b-201ENSMUST00000055262 Tcrg-C3L7N479 172 aa12.73□□□□□ -0.37
Vti1b-201ENSMUST00000055262 Olfr1262Q8VGN2 304 aa12.73□□□□□ -0.37
Vti1b-201ENSMUST00000055262 S100a1P56565 94 aa12.72□□□□□ -0.37
Vti1b-201ENSMUST00000055262 Wfdc3Q14AE4 130 aa12.72□□□□□ -0.37
Vti1b-201ENSMUST00000055262 Clec4b2Q67DU8 208 aa12.72□□□□□ -0.37
Vti1b-201ENSMUST00000055262 Tex48Q9DA81 110 aa12.72□□□□□ -0.37
Vti1b-201ENSMUST00000055262 Cst10Q9JM84 148 aa12.72□□□□□ -0.37
Vti1b-201ENSMUST00000055262 Ighv1-49A0A0A6YWX2 117 aa12.72□□□□□ -0.37
Vti1b-201ENSMUST00000055262 Gm5426J3QNM7 103 aa12.72□□□□□ -0.37
Vti1b-201ENSMUST00000055262 Il1f10Q8R459 152 aa12.72□□□□□ -0.37
Vti1b-201ENSMUST00000055262 Igkv4-53A0A0G2JFC6 119 aa12.71□□□□□ -0.38
Vti1b-201ENSMUST00000055262 Vsig4F6TUL9 280 aa12.71□□□□□ -0.38
Vti1b-201ENSMUST00000055262 Esp3J3QN49 87 aa12.71□□□□□ -0.38
Vti1b-201ENSMUST00000055262 Fabp4P04117 132 aa12.71□□□□□ -0.38
Vti1b-201ENSMUST00000055262 SstP60041 116 aa12.71□□□□□ -0.38
Vti1b-201ENSMUST00000055262 Ramp1Q9WTJ5 148 aa12.71□□□□□ -0.38
Vti1b-201ENSMUST00000055262 Fras1Q80T14 4010 aa12.7□□□□□ -0.38
Vti1b-201ENSMUST00000055262 Gm10772F7AIG4 85 aa12.7□□□□□ -0.38
Vti1b-201ENSMUST00000055262 Leprotl1Q9CQ74 131 aa12.7□□□□□ -0.38
Vti1b-201ENSMUST00000055262 9130204L05RikG3UWB8 92 aa12.69□□□□□ -0.38
Vti1b-201ENSMUST00000055262 Hist1h2bmP10854 126 aa12.69□□□□□ -0.38
Vti1b-201ENSMUST00000055262 Ceacam12Q3UKP4 300 aa12.69□□□□□ -0.38
Vti1b-201ENSMUST00000055262 Hist1h2bhQ64478 126 aa12.69□□□□□ -0.38
Vti1b-201ENSMUST00000055262 Hist2h2bbQ64525 126 aa12.69□□□□□ -0.38
Vti1b-201ENSMUST00000055262 Hist1h2bcQ6ZWY9 126 aaKnown RBP12.69□□□□□ -0.38
Vti1b-201ENSMUST00000055262 Atp6v0e2Q91XE7 81 aa12.69□□□□□ -0.38
Vti1b-201ENSMUST00000055262 TirapQ99JY1 241 aa12.69□□□□□ -0.38
Vti1b-201ENSMUST00000055262 Mrpl32Q9DCI9 187 aaKnown RBP12.69□□□□□ -0.38
Vti1b-201ENSMUST00000055262 Slc25a20Q9Z2Z6 301 aaKnown RBP12.69□□□□□ -0.38
Vti1b-201ENSMUST00000055262 Trav14-2A0A075B694 121 aa12.68□□□□□ -0.38
Vti1b-201ENSMUST00000055262 Nat8b-psE0CYC6 232 aa12.68□□□□□ -0.38
Vti1b-201ENSMUST00000055262 Sh2d1aO88890 126 aa12.68□□□□□ -0.38
Vti1b-201ENSMUST00000055262 9130213A22RikQ3V3T2 120 aa12.68□□□□□ -0.38
Vti1b-201ENSMUST00000055262 Rab5bP61021 215 aa12.67□□□□□ -0.38
Vti1b-201ENSMUST00000055262 Eif4ebp1Q60876 117 aa12.67□□□□□ -0.38
Vti1b-201ENSMUST00000055262 Tmem88Q9D0N8 159 aa12.67□□□□□ -0.38
Vti1b-201ENSMUST00000055262 OdaphJ3QNT8 126 aa12.66□□□□□ -0.38
Vti1b-201ENSMUST00000055262 Mrps10Q80ZK0 160 aaKnown RBP12.66□□□□□ -0.38
Vti1b-201ENSMUST00000055262 Chchd1Q9CQA6 118 aa12.66□□□□□ -0.38
Vti1b-201ENSMUST00000055262 Sertad4A7DTG3 377 aa12.65□□□□□ -0.38
Vti1b-201ENSMUST00000055262 4930596D02RikQ3V0H9 216 aa12.65□□□□□ -0.38
Vti1b-201ENSMUST00000055262 Fam19a2Q7TPG7 131 aa12.65□□□□□ -0.38
Vti1b-201ENSMUST00000055262 Zfand2bQ91X58 257 aa12.65□□□□□ -0.38
Vti1b-201ENSMUST00000055262 Ormdl2Q9CQZ0 153 aa12.65□□□□□ -0.38
Vti1b-201ENSMUST00000055262 2310061N02RikQ9D6S9 174 aa12.65□□□□□ -0.38
Vti1b-201ENSMUST00000055262 Atg101Q9D8Z6 218 aa12.65□□□□□ -0.38
Vti1b-201ENSMUST00000055262 Dnah1E9Q8T7 4250 aa12.65□□□□□ -0.38
Vti1b-201ENSMUST00000055262 Tmem238lA0A1B0GS74 79 aa12.65□□□□□ -0.38
Vti1b-201ENSMUST00000055262 CrygaP04345 174 aa12.65□□□□□ -0.38
Vti1b-201ENSMUST00000055262 PlecQ9QXS1 4691 aaKnown RBP12.65□□□□□ -0.39
Vti1b-201ENSMUST00000055262 Rpl36-ps4A0A140T8U4 117 aa12.64□□□□□ -0.39
Vti1b-201ENSMUST00000055262 Spink1P09036 80 aa12.64□□□□□ -0.39
Vti1b-201ENSMUST00000055262 Snhg11Q4G0K9 87 aa12.64□□□□□ -0.39
Vti1b-201ENSMUST00000055262 Psors1c2Q80ZC9 134 aa12.64□□□□□ -0.39
Vti1b-201ENSMUST00000055262 Tmem136Q3TYE7 245 aa12.63□□□□□ -0.39
Vti1b-201ENSMUST00000055262 Klk5Q9D140 293 aa12.63□□□□□ -0.39
Vti1b-201ENSMUST00000055262 Dnah7aE9Q0T8 4024 aa12.63□□□□□ -0.39
Vti1b-201ENSMUST00000055262 Igkv4-78A0A0A6YYE5 119 aa12.62□□□□□ -0.39
Vti1b-201ENSMUST00000055262 Lcn2P11672 200 aa12.62□□□□□ -0.39
Vti1b-201ENSMUST00000055262 RnasekQ8K3C0 98 aa12.62□□□□□ -0.39
Vti1b-201ENSMUST00000055262 Stard4Q99JV5 224 aa12.62□□□□□ -0.39
Vti1b-201ENSMUST00000055262 Pdzd11Q9CZG9 140 aa12.62□□□□□ -0.39
Vti1b-201ENSMUST00000055262 Ifitm1Q9D103 106 aa12.62□□□□□ -0.39
Vti1b-201ENSMUST00000055262 Cryba4Q9JJV0 196 aa12.62□□□□□ -0.39
Retrieved 100 of 22,080 RNA–protein pairs in 27.5 ms