RNA–Protein interactions for RNA: ENSMUST00000055262.12

Vti1b-201, Transcript of Vesicle transport through interaction with t-SNAREs homolog 1B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vti1b, Length 1,490 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1b-201ENSMUST00000055262 Gm35339A0A140LHH9 1649 aa41,28■■■■■ 4,2
Vti1b-201ENSMUST00000055262 NischQ80TM9 1593 aa40,84■■■■■ 4,13
Vti1b-201ENSMUST00000055262 Abcc9P70170 1546 aa39,55■■■■□ 3,92
Vti1b-201ENSMUST00000055262 Abcc8B2RUS7 1588 aa39,43■■■■□ 3,9
Vti1b-201ENSMUST00000055262 ScribQ80U72 1612 aa37,93■■■■□ 3,66
Vti1b-201ENSMUST00000055262 NacadQ5SWP3 1504 aa36,76■■■■□ 3,47
Vti1b-201ENSMUST00000055262 Kdm5dQ62240 1548 aa36,74■■■■□ 3,47
Vti1b-201ENSMUST00000055262 Dcaf1Q80TR8 1506 aa36,29■■■■□ 3,4
Vti1b-201ENSMUST00000055262 Sycp2Q9CUU3 1500 aa36,03■■■■□ 3,36
Vti1b-201ENSMUST00000055262 Rb1cc1Q9ESK9 1588 aa35,64■■■■□ 3,3
Vti1b-201ENSMUST00000055262 Rhox8Q6VSS7 320 aa35,51■■■■□ 3,28
Vti1b-201ENSMUST00000055262 BicraF8VPZ9 1578 aa35,5■■■■□ 3,27
Vti1b-201ENSMUST00000055262 Baz1aO88379 1555 aa35,13■■■■□ 3,21
Vti1b-201ENSMUST00000055262 Ccdc180J3QNE4 1664 aa35,06■■■■□ 3,2
Vti1b-201ENSMUST00000055262 Crybg2B7ZCC2 1516 aa34,88■■■■□ 3,18
Vti1b-201ENSMUST00000055262 Zcchc6Q5BLK4 1491 aaKnown RBP34,63■■■■□ 3,13
Vti1b-201ENSMUST00000055262 Pds5bQ4VA53 1446 aaKnown RBP34,48■■■■□ 3,11
Vti1b-201ENSMUST00000055262 Dnajc5bQ9CQ94 199 aa34,27■■■■□ 3,08
Vti1b-201ENSMUST00000055262 Atad2bE9Q166 1460 aaKnown RBP34,18■■■■□ 3,06
Vti1b-201ENSMUST00000055262 Thoc2B1AZI6 1594 aaKnown RBP34,13■■■■□ 3,05
Vti1b-201ENSMUST00000055262 Smarca2Q6DIC0 1577 aa34,11■■■■□ 3,05
Vti1b-201ENSMUST00000055262 Smarca4Q3TKT4 1613 aaKnown RBP33,99■■■■□ 3,03
Vti1b-201ENSMUST00000055262 Cecr2E9Q2Z1 1453 aa33,95■■■■□ 3,02
Vti1b-201ENSMUST00000055262 Rtl1Q7M732 1744 aa33,83■■■■□ 3,01
Vti1b-201ENSMUST00000055262 Ercc6F8VPZ5 1481 aa33,81■■■■□ 3
Vti1b-201ENSMUST00000055262 Iqgap2Q3UQ44 1575 aa33,79■■■■□ 3
Vti1b-201ENSMUST00000055262 Cc2d2aQ8CFW7 1633 aa33,61■■■□□ 2,97
Vti1b-201ENSMUST00000055262 Wdr62Q3U3T8 1523 aa33,46■■■□□ 2,95
Vti1b-201ENSMUST00000055262 Frmpd1A2AKB4 1549 aa33,4■■■□□ 2,94
Vti1b-201ENSMUST00000055262 Fam135aQ6NS59 1506 aa33,4■■■□□ 2,94
Vti1b-201ENSMUST00000055262 CftrP26361 1476 aa33,2■■■□□ 2,91
Vti1b-201ENSMUST00000055262 Ccdc136Q3TVA9 1136 aa33,18■■■□□ 2,9
Vti1b-201ENSMUST00000055262 Phldb1Q6PDH0 1371 aaKnown RBP33,18■■■□□ 2,9
Vti1b-201ENSMUST00000055262 Synj1Q8CHC4 1574 aa33,17■■■□□ 2,9
Vti1b-201ENSMUST00000055262 Cttnbp2B9EJA2 1648 aa33,17■■■□□ 2,9
Vti1b-201ENSMUST00000055262 Brd4Q9ESU6 1400 aaKnown RBP33,16■■■□□ 2,9
Vti1b-201ENSMUST00000055262 Baz1bQ9Z277 1479 aa32,96■■■□□ 2,87
Vti1b-201ENSMUST00000055262 Unc13aQ4KUS2 1712 aa32,94■■■□□ 2,86
Vti1b-201ENSMUST00000055262 Ubl4bQ9CQ84 188 aa32,86■■■□□ 2,85
Vti1b-201ENSMUST00000055262 Esf1Q3V1V3 845 aaKnown RBP32,65■■■□□ 2,82
Vti1b-201ENSMUST00000055262 Trim41Q5NCC3 630 aa32,64■■■□□ 2,82
Vti1b-201ENSMUST00000055262 Mrc2Q64449 1479 aa32,63■■■□□ 2,81
Vti1b-201ENSMUST00000055262 Rsf1E9PWW9 1441 aaKnown RBP32,37■■■□□ 2,77
Vti1b-201ENSMUST00000055262 Kif15Q6P9L6 1387 aa32,3■■■□□ 2,76
Vti1b-201ENSMUST00000055262 Cux2P70298 1426 aa32,23■■■□□ 2,75
Vti1b-201ENSMUST00000055262 Lamc3Q9R0B6 1581 aa32,19■■■□□ 2,74
Vti1b-201ENSMUST00000055262 Golga3P55937 1487 aa32,07■■■□□ 2,72
Vti1b-201ENSMUST00000055262 Top2bQ64511 1612 aa31,99■■■□□ 2,71
Vti1b-201ENSMUST00000055262 Cngb1E1AZ71 1325 aa31,98■■■□□ 2,71
Vti1b-201ENSMUST00000055262 Kif21aQ9QXL2 1672 aa31,95■■■□□ 2,71
Vti1b-201ENSMUST00000055262 Lrriq1Q0P5X1 1673 aa31,9■■■□□ 2,7
Vti1b-201ENSMUST00000055262 Npm1Q61937 292 aaKnown RBP31,89■■■□□ 2,7
Vti1b-201ENSMUST00000055262 TnnQ80Z71 1560 aa31,89■■■□□ 2,7
Vti1b-201ENSMUST00000055262 Cep164Q5DU05 1446 aa31,81■■■□□ 2,68
Vti1b-201ENSMUST00000055262 Ccdc18Q640L5 1455 aa31,73■■■□□ 2,67
Vti1b-201ENSMUST00000055262 Il27Q8K3I6 234 aa31,69■■■□□ 2,66
Vti1b-201ENSMUST00000055262 Fmn1Q05860 1466 aa31,67■■■□□ 2,66
Vti1b-201ENSMUST00000055262 Camsap1A2AHC3 1581 aa31,66■■■□□ 2,66
Vti1b-201ENSMUST00000055262 Dhx29Q6PGC1 1365 aaKnown RBP31,57■■■□□ 2,64
Vti1b-201ENSMUST00000055262 LrpprcQ6PB66 1392 aaKnown RBP31,52■■■□□ 2,64
Vti1b-201ENSMUST00000055262 Eif4g3Q80XI3 1579 aaKnown RBP31,46■■■□□ 2,63
Vti1b-201ENSMUST00000055262 Urb2E9Q7L1 1524 aaKnown RBP31,46■■■□□ 2,63
Vti1b-201ENSMUST00000055262 Plb1Q3TTY0 1478 aa31,43■■■□□ 2,62
Vti1b-201ENSMUST00000055262 Crocc2F6XLV1 1638 aa31,42■■■□□ 2,62
Vti1b-201ENSMUST00000055262 PogzQ8BZH4 1409 aaKnown RBP31,36■■■□□ 2,61
Vti1b-201ENSMUST00000055262 Ccdc88bQ4QRL3 1481 aa31,26■■■□□ 2,6
Vti1b-201ENSMUST00000055262 Grin2bQ01097 1482 aa31,24■■■□□ 2,59
Vti1b-201ENSMUST00000055262 Duox2A2AQ99 1517 aa31,21■■■□□ 2,59
Vti1b-201ENSMUST00000055262 Ift140E9PY46 1464 aa31,15■■■□□ 2,58
Vti1b-201ENSMUST00000055262 Top2aQ01320 1528 aaKnown RBP31,1■■■□□ 2,57
Vti1b-201ENSMUST00000055262 HrcG5E8J6 738 aa31,04■■■□□ 2,56
Vti1b-201ENSMUST00000055262 Chic1Q8CBW7 227 aa31,04■■■□□ 2,56
Vti1b-201ENSMUST00000055262 Rusc2Q80U22 1514 aa31,03■■■□□ 2,56
Vti1b-201ENSMUST00000055262 Samd9lQ69Z37 1561 aa31,01■■■□□ 2,55
Vti1b-201ENSMUST00000055262 Efcab5A0JP43 1406 aa30,98■■■□□ 2,55
Vti1b-201ENSMUST00000055262 Disp1Q3TDN0 1521 aa30,95■■■□□ 2,54
Vti1b-201ENSMUST00000055262 Shroom2A2ALU4 1481 aa30,94■■■□□ 2,54
Vti1b-201ENSMUST00000055262 NrkQ9R0G8 1455 aa30,9■■■□□ 2,54
Vti1b-201ENSMUST00000055262 Pbrm1Q8BSQ9 1634 aaKnown RBP30,83■■■□□ 2,53
Vti1b-201ENSMUST00000055262 Dnajc5P60904 198 aa30,82■■■□□ 2,52
Vti1b-201ENSMUST00000055262 Nup160Q9Z0W3 1402 aaKnown RBP30,81■■■□□ 2,52
Vti1b-201ENSMUST00000055262 Shroom4Q1W617 1475 aa30,8■■■□□ 2,52
Vti1b-201ENSMUST00000055262 Rad54l2Q99NG0 1466 aa30,79■■■□□ 2,52
Vti1b-201ENSMUST00000055262 PtprkP35822 1457 aa30,77■■■□□ 2,52
Vti1b-201ENSMUST00000055262 Cc2d2bA0A286YDU8 1405 aa30,74■■■□□ 2,51
Vti1b-201ENSMUST00000055262 Grin2aP35436 1464 aa30,69■■■□□ 2,5
Vti1b-201ENSMUST00000055262 Magi3Q9EQJ9 1476 aa30,69■■■□□ 2,5
Vti1b-201ENSMUST00000055262 Setd1bQ8CFT2 1985 aa30,67■■■□□ 2,5
Vti1b-201ENSMUST00000055262 Pabpn1Q8CCS6 302 aaKnown RBP30,67■■■□□ 2,5
Vti1b-201ENSMUST00000055262 SynmQ70IV5 1561 aa30,6■■■□□ 2,49
Vti1b-201ENSMUST00000055262 AqrQ8CFQ3 1481 aaKnown RBP30,58■■■□□ 2,49
Vti1b-201ENSMUST00000055262 Pelp1Q9DBD5 1123 aaKnown RBP30,57■■■□□ 2,48
Vti1b-201ENSMUST00000055262 Zeb1Q64318 1117 aa30,54■■■□□ 2,48
Vti1b-201ENSMUST00000055262 Pla2r1Q62028 1487 aa30,54■■■□□ 2,48
Vti1b-201ENSMUST00000055262 Gpatch8A2A6A1 1505 aa30,48■■■□□ 2,47
Vti1b-201ENSMUST00000055262 Col17a1Q07563 1470 aa30,47■■■□□ 2,47
Vti1b-201ENSMUST00000055262 Npm2Q80W85 207 aa30,47■■■□□ 2,47
Vti1b-201ENSMUST00000055262 Fgd6Q69ZL1 1399 aa30,4■■■□□ 2,46
Vti1b-201ENSMUST00000055262 Mroh2bQ7M6Y6 1581 aa30,37■■■□□ 2,45
Vti1b-201ENSMUST00000055262 Gab3Q8BSM5 595 aa30,34■■■□□ 2,45
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