RNA–Protein interactions for RNA: ENSMUST00000201549.3

Scn8a-213, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS P5 TSL 5 BASIC

Gene Scn8a, Length 7,120 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-213ENSMUST00000201549 PscaP57096 123 aa7.28□□□□□ -1.24
Scn8a-213ENSMUST00000201549 Tmem254aP0DN89 123 aa7.27□□□□□ -1.24
Scn8a-213ENSMUST00000201549 Tmem254bP0DN90 123 aa7.27□□□□□ -1.24
Scn8a-213ENSMUST00000201549 Tmem254cP0DN91 123 aa7.27□□□□□ -1.24
Scn8a-213ENSMUST00000201549 Lypd1Q8BLC3 141 aa7.27□□□□□ -1.24
Scn8a-213ENSMUST00000201549 9430069I07RikQ9CX21 111 aa7.27□□□□□ -1.24
Scn8a-213ENSMUST00000201549 Naa38Q9D2U5 125 aa7.27□□□□□ -1.24
Scn8a-213ENSMUST00000201549 Tpsg1Q9QUL7 311 aa7.27□□□□□ -1.24
Scn8a-213ENSMUST00000201549 Med13lQ6JPI3 2207 aa7.27□□□□□ -1.25
Scn8a-213ENSMUST00000201549 Ncor1Q60974 2453 aa7.27□□□□□ -1.25
Scn8a-213ENSMUST00000201549 Igkv3-7A0A0G2JE31 119 aa7.27□□□□□ -1.25
Scn8a-213ENSMUST00000201549 Psmb11Q8BG41 302 aa7.27□□□□□ -1.25
Scn8a-213ENSMUST00000201549 P01725 110 aa7.27□□□□□ -1.25
Scn8a-213ENSMUST00000201549 Nbl1Q61477 178 aa7.27□□□□□ -1.25
Scn8a-213ENSMUST00000201549 Igkv1-117A0A140T8M0 119 aa7.27□□□□□ -1.25
Scn8a-213ENSMUST00000201549 Sox16Q62247 57 aa7.27□□□□□ -1.25
Scn8a-213ENSMUST00000201549 Gemin7Q9CWY4 129 aa7.27□□□□□ -1.25
Scn8a-213ENSMUST00000201549 Kiaa1549Q68FD9 1940 aa7.26□□□□□ -1.25
Scn8a-213ENSMUST00000201549 Gm4707V9GXN5 68 aa7.26□□□□□ -1.25
Scn8a-213ENSMUST00000201549 Znrf2Q71FD5 238 aa7.26□□□□□ -1.25
Scn8a-213ENSMUST00000201549 Cryba4Q9JJV0 196 aa7.26□□□□□ -1.25
Scn8a-213ENSMUST00000201549 Pde6hP61249 83 aa7.26□□□□□ -1.25
Scn8a-213ENSMUST00000201549 Taf15Q8BQ46 557 aaKnown RBP7.26□□□□□ -1.25
Scn8a-213ENSMUST00000201549 Obox8V9GWY9 217 aa7.26□□□□□ -1.25
Scn8a-213ENSMUST00000201549 Dscaml1Q4VA61 2053 aa7.26□□□□□ -1.25
Scn8a-213ENSMUST00000201549 SonQ9QX47 2444 aaKnown RBP7.26□□□□□ -1.25
Scn8a-213ENSMUST00000201549 P06330 118 aa7.26□□□□□ -1.25
Scn8a-213ENSMUST00000201549 Tm2d1Q99MB3 208 aa7.26□□□□□ -1.25
Scn8a-213ENSMUST00000201549 Gm28778A0A087WSK7 233 aa7.25□□□□□ -1.25
Scn8a-213ENSMUST00000201549 Ighv1-39A0A075B5V5 117 aa7.25□□□□□ -1.25
Scn8a-213ENSMUST00000201549 Ighv1-9A0A0A6YW37 117 aa7.25□□□□□ -1.25
Scn8a-213ENSMUST00000201549 Gm12253Q5NC48 229 aa7.25□□□□□ -1.25
Scn8a-213ENSMUST00000201549 Ighv8-8A0A0A6YXQ0 119 aa7.25□□□□□ -1.25
Scn8a-213ENSMUST00000201549 Them7Q9DCP4 223 aa7.25□□□□□ -1.25
Scn8a-213ENSMUST00000201549 Hbb-b1P02088 147 aa7.25□□□□□ -1.25
Scn8a-213ENSMUST00000201549 Abca4O35600 2310 aa7.25□□□□□ -1.25
Scn8a-213ENSMUST00000201549 Ndufa1O35683 70 aa7.25□□□□□ -1.25
Scn8a-213ENSMUST00000201549 Gphb5Q812B2 130 aa7.25□□□□□ -1.25
Scn8a-213ENSMUST00000201549 Reg3gO09049 174 aa7.25□□□□□ -1.25
Scn8a-213ENSMUST00000201549 Inafm2A0A1L1STD6 152 aa7.24□□□□□ -1.25
Scn8a-213ENSMUST00000201549 CstadQ9D245 104 aa7.24□□□□□ -1.25
Scn8a-213ENSMUST00000201549 P01738 130 aa7.24□□□□□ -1.25
Scn8a-213ENSMUST00000201549 Gm10192Q3V0S1 108 aa7.24□□□□□ -1.25
Scn8a-213ENSMUST00000201549 P04940 107 aa7.24□□□□□ -1.25
Scn8a-213ENSMUST00000201549 P04941 107 aa7.24□□□□□ -1.25
Scn8a-213ENSMUST00000201549 Gm12057A0A087WR21 115 aa7.24□□□□□ -1.25
Scn8a-213ENSMUST00000201549 P01794 123 aa7.24□□□□□ -1.25
Scn8a-213ENSMUST00000201549 Gm33815A0A087WNV3 176 aa7.23□□□□□ -1.25
Scn8a-213ENSMUST00000201549 Gm17324Q8C6J8 137 aa7.23□□□□□ -1.25
Scn8a-213ENSMUST00000201549 Cysrt1Q9D1E4 142 aa7.23□□□□□ -1.25
Scn8a-213ENSMUST00000201549 Col6a4A2AX52 2309 aa7.23□□□□□ -1.25
Scn8a-213ENSMUST00000201549 P01728 117 aa7.23□□□□□ -1.25
Scn8a-213ENSMUST00000201549 Klk12B2RVZ0 247 aa7.23□□□□□ -1.25
Scn8a-213ENSMUST00000201549 Foxi1Q922I5 372 aa7.23□□□□□ -1.25
Scn8a-213ENSMUST00000201549 Tctex1d4Q8CDY7 219 aa7.23□□□□□ -1.25
Scn8a-213ENSMUST00000201549 Tomm6Q9CQN3 74 aa7.23□□□□□ -1.25
Scn8a-213ENSMUST00000201549 Gm6034E9Q101 117 aa7.23□□□□□ -1.25
Scn8a-213ENSMUST00000201549 Gm19684G3UZ45 117 aa7.23□□□□□ -1.25
Scn8a-213ENSMUST00000201549 Fgf6P21658 208 aa7.23□□□□□ -1.25
Scn8a-213ENSMUST00000201549 A530064D06RikQ8BNV8 229 aa7.23□□□□□ -1.25
Scn8a-213ENSMUST00000201549 BC048562Q80ZQ7 204 aa7.23□□□□□ -1.25
Scn8a-213ENSMUST00000201549 Trav9n-4A0A075B631 113 aa7.22□□□□□ -1.25
Scn8a-213ENSMUST00000201549 Ighv8-12A0A0G2JDE1 119 aa7.22□□□□□ -1.25
Scn8a-213ENSMUST00000201549 Gm9949Q8C9F4 104 aa7.22□□□□□ -1.25
Scn8a-213ENSMUST00000201549 Igkv2-109A0A075B5K6 120 aa7.22□□□□□ -1.25
Scn8a-213ENSMUST00000201549 B230359F08RikA0A0B4J1K3 109 aa7.22□□□□□ -1.25
Scn8a-213ENSMUST00000201549 Ang3P97802 145 aa7.22□□□□□ -1.25
Scn8a-213ENSMUST00000201549 Fam216bQ8CC14 138 aa7.22□□□□□ -1.25
Scn8a-213ENSMUST00000201549 Lect2O88803 151 aa7.22□□□□□ -1.25
Scn8a-213ENSMUST00000201549 Trav13-2A0A075B649 110 aa7.21□□□□□ -1.25
Scn8a-213ENSMUST00000201549 AvpP35455 168 aa7.21□□□□□ -1.25
Scn8a-213ENSMUST00000201549 Ypel4Q65Z93 127 aa7.21□□□□□ -1.25
Scn8a-213ENSMUST00000201549 Igkv1-110A0A0B4J1I0 119 aa7.21□□□□□ -1.25
Scn8a-213ENSMUST00000201549 OdaphJ3QNT8 126 aa7.21□□□□□ -1.25
Scn8a-213ENSMUST00000201549 Trav13d-4A0A0G2JFX3 110 aa7.21□□□□□ -1.26
Scn8a-213ENSMUST00000201549 Cfap126Q6P8X9 189 aa7.21□□□□□ -1.26
Scn8a-213ENSMUST00000201549 Ncor2Q9WU42 2472 aaKnown RBP7.21□□□□□ -1.26
Scn8a-213ENSMUST00000201549 Sh2d1aO88890 126 aa7.21□□□□□ -1.26
Scn8a-213ENSMUST00000201549 Minos1Q7TNS2 76 aa7.21□□□□□ -1.26
Scn8a-213ENSMUST00000201549 Gm4861Q8C5A4 106 aa7.21□□□□□ -1.26
Scn8a-213ENSMUST00000201549 Trav6n-6A0A075B6B2 114 aa7.2□□□□□ -1.26
Scn8a-213ENSMUST00000201549 GfyJ3KML8 504 aa7.2□□□□□ -1.26
Scn8a-213ENSMUST00000201549 Usp34Q6ZQ93 3582 aa7.2□□□□□ -1.26
Scn8a-213ENSMUST00000201549 P01630 113 aa7.2□□□□□ -1.26
Scn8a-213ENSMUST00000201549 Trav13n-2A0A0G2JF93 110 aa7.2□□□□□ -1.26
Scn8a-213ENSMUST00000201549 P01745 121 aa7.2□□□□□ -1.26
Scn8a-213ENSMUST00000201549 P04942 107 aa7.2□□□□□ -1.26
Scn8a-213ENSMUST00000201549 ScxQ64124 207 aa7.2□□□□□ -1.26
Scn8a-213ENSMUST00000201549 Sdhaf1Q3U276 118 aa7.2□□□□□ -1.26
Scn8a-213ENSMUST00000201549 Trav6-6A0A075B603 114 aa7.2□□□□□ -1.26
Scn8a-213ENSMUST00000201549 PtprbB2RU80 1998 aa7.19□□□□□ -1.26
Scn8a-213ENSMUST00000201549 P01786 117 aa7.19□□□□□ -1.26
Scn8a-213ENSMUST00000201549 Trav13-1A0A075B644 110 aa7.19□□□□□ -1.26
Scn8a-213ENSMUST00000201549 Igkv8-21A0A140T8P7 120 aa7.19□□□□□ -1.26
Scn8a-213ENSMUST00000201549 Gm37988J3QM41 62 aa7.19□□□□□ -1.26
Scn8a-213ENSMUST00000201549 Defb13Q8R2I4 64 aa7.19□□□□□ -1.26
Scn8a-213ENSMUST00000201549 Egr2P08152 470 aa7.19□□□□□ -1.26
Scn8a-213ENSMUST00000201549 Gata3P23772 443 aa7.19□□□□□ -1.26
Scn8a-213ENSMUST00000201549 Flg2Q2VIS4 2362 aa7.19□□□□□ -1.26
Scn8a-213ENSMUST00000201549 Defb38Q7TNV7 63 aa7.19□□□□□ -1.26
Retrieved 100 of 22,080 RNA–protein pairs in 82.1 ms