Protein–RNA interactions for Protein: P02088

Hbb-b1, Hemoglobin subunit beta-1, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hbb-b1P02088 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC24,36■■□□□ 1,49
Hbb-b1P02088 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC23,61■■□□□ 1,37
Hbb-b1P02088 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC23,48■■□□□ 1,35
Hbb-b1P02088 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC23,21■■□□□ 1,31
Hbb-b1P02088 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC23,1■■□□□ 1,29
Hbb-b1P02088 Psd-208ENSMUST00000224556 2034 ntBASIC23,09■■□□□ 1,29
Hbb-b1P02088 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC21,98■■□□□ 1,11
Hbb-b1P02088 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC21,95■■□□□ 1,1
Hbb-b1P02088 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC21,94■■□□□ 1,1
Hbb-b1P02088 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC21,92■■□□□ 1,1
Hbb-b1P02088 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC21,89■■□□□ 1,09
Hbb-b1P02088 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC21,89■■□□□ 1,09
Hbb-b1P02088 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC21,79■■□□□ 1,08
Hbb-b1P02088 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC21,78■■□□□ 1,08
Hbb-b1P02088 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC21,7■■□□□ 1,06
Hbb-b1P02088 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC21,63■■□□□ 1,05
Hbb-b1P02088 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC21,48■■□□□ 1,03
Hbb-b1P02088 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC21,38■■□□□ 1,01
Hbb-b1P02088 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC21,36■■□□□ 1,01
Hbb-b1P02088 Gm42596-201ENSMUST00000196305 1958 ntBASIC21,14■□□□□ 0,98
Hbb-b1P02088 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC21,13■□□□□ 0,97
Hbb-b1P02088 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC21,13■□□□□ 0,97
Hbb-b1P02088 Gm25239-201ENSMUST00000174915 86 ntBASIC21,09■□□□□ 0,97
Hbb-b1P02088 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC21,07■□□□□ 0,96
Hbb-b1P02088 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC21,01■□□□□ 0,95
Hbb-b1P02088 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC20,93■□□□□ 0,94
Hbb-b1P02088 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC20,87■□□□□ 0,93
Hbb-b1P02088 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC20,84■□□□□ 0,93
Hbb-b1P02088 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC20,83■□□□□ 0,93
Hbb-b1P02088 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC20,83■□□□□ 0,92
Hbb-b1P02088 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC20,81■□□□□ 0,92
Hbb-b1P02088 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC20,8■□□□□ 0,92
Hbb-b1P02088 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC20,76■□□□□ 0,91
Hbb-b1P02088 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC20,73■□□□□ 0,91
Hbb-b1P02088 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC20,6■□□□□ 0,89
Hbb-b1P02088 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC20,58■□□□□ 0,88
Hbb-b1P02088 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC20,58■□□□□ 0,88
Hbb-b1P02088 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC20,56■□□□□ 0,88
Hbb-b1P02088 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC20,54■□□□□ 0,88
Hbb-b1P02088 Gm10524-201ENSMUST00000181931 1893 ntBASIC20,45■□□□□ 0,86
Hbb-b1P02088 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC20,41■□□□□ 0,86
Hbb-b1P02088 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC20,39■□□□□ 0,85
Hbb-b1P02088 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC20,34■□□□□ 0,85
Hbb-b1P02088 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC20,31■□□□□ 0,84
Hbb-b1P02088 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC20,28■□□□□ 0,84
Hbb-b1P02088 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20,24■□□□□ 0,83
Hbb-b1P02088 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC20,15■□□□□ 0,82
Hbb-b1P02088 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC20,13■□□□□ 0,81
Hbb-b1P02088 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC20,07■□□□□ 0,8
Hbb-b1P02088 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC20,02■□□□□ 0,8
Hbb-b1P02088 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC20,01■□□□□ 0,79
Hbb-b1P02088 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC19,98■□□□□ 0,79
Hbb-b1P02088 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC19,96■□□□□ 0,79
Hbb-b1P02088 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC19,96■□□□□ 0,79
Hbb-b1P02088 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19,95■□□□□ 0,78
Hbb-b1P02088 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC19,94■□□□□ 0,78
Hbb-b1P02088 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC19,94■□□□□ 0,78
Hbb-b1P02088 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC19,93■□□□□ 0,78
Hbb-b1P02088 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC19,92■□□□□ 0,78
Hbb-b1P02088 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC19,91■□□□□ 0,78
Hbb-b1P02088 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC19,89■□□□□ 0,77
Hbb-b1P02088 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC19,88■□□□□ 0,77
Hbb-b1P02088 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC19,87■□□□□ 0,77
Hbb-b1P02088 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC19,85■□□□□ 0,77
Hbb-b1P02088 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC19,84■□□□□ 0,77
Hbb-b1P02088 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC19,84■□□□□ 0,77
Hbb-b1P02088 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC19,83■□□□□ 0,77
Hbb-b1P02088 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC19,83■□□□□ 0,76
Hbb-b1P02088 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC19,82■□□□□ 0,76
Hbb-b1P02088 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC19,81■□□□□ 0,76
Hbb-b1P02088 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC19,8■□□□□ 0,76
Hbb-b1P02088 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC19,71■□□□□ 0,75
Hbb-b1P02088 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC19,71■□□□□ 0,75
Hbb-b1P02088 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC19,7■□□□□ 0,74
Hbb-b1P02088 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC19,66■□□□□ 0,74
Hbb-b1P02088 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC19,66■□□□□ 0,74
Hbb-b1P02088 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC19,64■□□□□ 0,74
Hbb-b1P02088 Gm15042-201ENSMUST00000120212 883 ntBASIC19,62■□□□□ 0,73
Hbb-b1P02088 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC19,6■□□□□ 0,73
Hbb-b1P02088 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC19,58■□□□□ 0,72
Hbb-b1P02088 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC19,58■□□□□ 0,72
Hbb-b1P02088 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC19,57■□□□□ 0,72
Hbb-b1P02088 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC19,54■□□□□ 0,72
Hbb-b1P02088 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC19,54■□□□□ 0,72
Hbb-b1P02088 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC19,54■□□□□ 0,72
Hbb-b1P02088 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC19,52■□□□□ 0,71
Hbb-b1P02088 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC19,52■□□□□ 0,71
Hbb-b1P02088 CT025624.2-201ENSMUST00000223609 1909 ntBASIC19,51■□□□□ 0,71
Hbb-b1P02088 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC19,5■□□□□ 0,71
Hbb-b1P02088 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC19,44■□□□□ 0,7
Hbb-b1P02088 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC19,41■□□□□ 0,7
Hbb-b1P02088 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC19,4■□□□□ 0,7
Hbb-b1P02088 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC19,38■□□□□ 0,69
Hbb-b1P02088 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC19,38■□□□□ 0,69
Hbb-b1P02088 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC19,36■□□□□ 0,69
Hbb-b1P02088 Gm15045-201ENSMUST00000117359 883 ntBASIC19,35■□□□□ 0,69
Hbb-b1P02088 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC19,34■□□□□ 0,69
Hbb-b1P02088 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC19,33■□□□□ 0,69
Hbb-b1P02088 AC153504.1-201ENSMUST00000218379 2290 ntBASIC19,33■□□□□ 0,68
Hbb-b1P02088 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC19,29■□□□□ 0,68
Retrieved 100 of 76,532 protein–RNA pairs in 9,9 ms