Protein–RNA interactions for Protein: P02088

Hbb-b1, Hemoglobin subunit beta-1, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hbb-b1P02088 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Hbb-b1P02088 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Hbb-b1P02088 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC23.48■■□□□ 1.35
Hbb-b1P02088 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Hbb-b1P02088 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Hbb-b1P02088 Psd-208ENSMUST00000224556 2034 ntBASIC23.09■■□□□ 1.29
Hbb-b1P02088 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Hbb-b1P02088 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Hbb-b1P02088 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Hbb-b1P02088 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Hbb-b1P02088 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Hbb-b1P02088 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Hbb-b1P02088 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Hbb-b1P02088 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Hbb-b1P02088 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Hbb-b1P02088 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Hbb-b1P02088 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Hbb-b1P02088 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Hbb-b1P02088 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Hbb-b1P02088 Gm42596-201ENSMUST00000196305 1958 ntBASIC21.14■□□□□ 0.98
Hbb-b1P02088 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Hbb-b1P02088 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Hbb-b1P02088 Gm25239-201ENSMUST00000174915 86 ntBASIC21.09■□□□□ 0.97
Hbb-b1P02088 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC21.07■□□□□ 0.96
Hbb-b1P02088 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Hbb-b1P02088 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hbb-b1P02088 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC20.87■□□□□ 0.93
Hbb-b1P02088 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC20.84■□□□□ 0.93
Hbb-b1P02088 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Hbb-b1P02088 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Hbb-b1P02088 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Hbb-b1P02088 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Hbb-b1P02088 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC20.76■□□□□ 0.91
Hbb-b1P02088 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Hbb-b1P02088 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Hbb-b1P02088 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
Hbb-b1P02088 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.88
Hbb-b1P02088 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Hbb-b1P02088 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Hbb-b1P02088 Gm10524-201ENSMUST00000181931 1893 ntBASIC20.45■□□□□ 0.86
Hbb-b1P02088 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Hbb-b1P02088 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Hbb-b1P02088 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Hbb-b1P02088 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Hbb-b1P02088 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Hbb-b1P02088 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hbb-b1P02088 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Hbb-b1P02088 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC20.13■□□□□ 0.81
Hbb-b1P02088 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hbb-b1P02088 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Hbb-b1P02088 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Hbb-b1P02088 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC19.98■□□□□ 0.79
Hbb-b1P02088 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Hbb-b1P02088 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC19.96■□□□□ 0.79
Hbb-b1P02088 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Hbb-b1P02088 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Hbb-b1P02088 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Hbb-b1P02088 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Hbb-b1P02088 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Hbb-b1P02088 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Hbb-b1P02088 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Hbb-b1P02088 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Hbb-b1P02088 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Hbb-b1P02088 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC19.85■□□□□ 0.77
Hbb-b1P02088 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC19.84■□□□□ 0.77
Hbb-b1P02088 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hbb-b1P02088 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC19.83■□□□□ 0.77
Hbb-b1P02088 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Hbb-b1P02088 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hbb-b1P02088 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hbb-b1P02088 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Hbb-b1P02088 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hbb-b1P02088 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hbb-b1P02088 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hbb-b1P02088 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hbb-b1P02088 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hbb-b1P02088 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Hbb-b1P02088 Gm15042-201ENSMUST00000120212 883 ntBASIC19.62■□□□□ 0.73
Hbb-b1P02088 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hbb-b1P02088 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Hbb-b1P02088 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Hbb-b1P02088 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Hbb-b1P02088 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hbb-b1P02088 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hbb-b1P02088 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Hbb-b1P02088 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Hbb-b1P02088 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Hbb-b1P02088 CT025624.2-201ENSMUST00000223609 1909 ntBASIC19.51■□□□□ 0.71
Hbb-b1P02088 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Hbb-b1P02088 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Hbb-b1P02088 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hbb-b1P02088 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
Hbb-b1P02088 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hbb-b1P02088 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hbb-b1P02088 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hbb-b1P02088 Gm15045-201ENSMUST00000117359 883 ntBASIC19.35■□□□□ 0.69
Hbb-b1P02088 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hbb-b1P02088 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Hbb-b1P02088 AC153504.1-201ENSMUST00000218379 2290 ntBASIC19.33■□□□□ 0.68
Hbb-b1P02088 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms