RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 Mrps12O35680 139 aa16.52■□□□□ 0.24
Scn1b-201ENSMUST00000098548 Gm5148Q8BGG2 154 aa16.52■□□□□ 0.24
Scn1b-201ENSMUST00000098548 Ighv8-4A0A0A6YW26 117 aa16.51■□□□□ 0.23
Scn1b-201ENSMUST00000098548 Clec5aQ9R007 190 aa16.51■□□□□ 0.23
Scn1b-201ENSMUST00000098548 Rpl36-ps4A0A140T8U4 117 aa16.51■□□□□ 0.23
Scn1b-201ENSMUST00000098548 Umad1E0CX23 159 aa16.51■□□□□ 0.23
Scn1b-201ENSMUST00000098548 E130114P18RikF6S0S7 154 aa16.51■□□□□ 0.23
Scn1b-201ENSMUST00000098548 Trav7d-3Q5R1I1 112 aa16.51■□□□□ 0.23
Scn1b-201ENSMUST00000098548 Tctex1d2Q9CQ66 144 aa16.51■□□□□ 0.23
Scn1b-201ENSMUST00000098548 Snai3Q9QY31 287 aa16.51■□□□□ 0.23
Scn1b-201ENSMUST00000098548 VwfQ8CIZ8 2813 aa16.5■□□□□ 0.23
Scn1b-201ENSMUST00000098548 Pglyrp1O88593 182 aa16.5■□□□□ 0.23
Scn1b-201ENSMUST00000098548 Csn3P06796 181 aa16.5■□□□□ 0.23
Scn1b-201ENSMUST00000098548 Fxyd7P59648 80 aa16.5■□□□□ 0.23
Scn1b-201ENSMUST00000098548 AI854703Q8BIN3 203 aa16.5■□□□□ 0.23
Scn1b-201ENSMUST00000098548 Gm9922Q8C3P1 144 aa16.5■□□□□ 0.23
Scn1b-201ENSMUST00000098548 Lcn2P11672 200 aa16.49■□□□□ 0.23
Scn1b-201ENSMUST00000098548 Card19Q9D1I2 183 aa16.49■□□□□ 0.23
Scn1b-201ENSMUST00000098548 Igkv4-68A0A0B4J1I7 117 aa16.48■□□□□ 0.23
Scn1b-201ENSMUST00000098548 Cox8bP48772 70 aa16.48■□□□□ 0.23
Scn1b-201ENSMUST00000098548 Tomm6Q9CQN3 74 aa16.48■□□□□ 0.23
Scn1b-201ENSMUST00000098548 Ceacam15A0A0B4J1L0 234 aa16.47■□□□□ 0.23
Scn1b-201ENSMUST00000098548 CrygdP04342 174 aa16.47■□□□□ 0.23
Scn1b-201ENSMUST00000098548 Cox17P56394 63 aa16.47■□□□□ 0.23
Scn1b-201ENSMUST00000098548 Fxyd5P97808 178 aa16.47■□□□□ 0.23
Scn1b-201ENSMUST00000098548 CrygeQ03740 174 aa16.47■□□□□ 0.23
Scn1b-201ENSMUST00000098548 Hist2h2beQ64524 126 aa16.47■□□□□ 0.23
Scn1b-201ENSMUST00000098548 Q99M08 65 aa16.47■□□□□ 0.23
Scn1b-201ENSMUST00000098548 Crip2Q9DCT8 208 aaKnown RBP16.47■□□□□ 0.23
Scn1b-201ENSMUST00000098548 A0A1Y7VMQ4 148 aa16.47■□□□□ 0.23
Scn1b-201ENSMUST00000098548 Emp2O88662 172 aa16.47■□□□□ 0.23
Scn1b-201ENSMUST00000098548 C1qcQ02105 246 aa16.47■□□□□ 0.23
Scn1b-201ENSMUST00000098548 Sdhaf1Q3U276 118 aa16.47■□□□□ 0.23
Scn1b-201ENSMUST00000098548 Gm815Q3UWS2 115 aa16.46■□□□□ 0.23
Scn1b-201ENSMUST00000098548 Tnfrsf23Q9ER63 176 aa16.46■□□□□ 0.23
Scn1b-201ENSMUST00000098548 CcsQ9WU84 274 aa16.46■□□□□ 0.23
Scn1b-201ENSMUST00000098548 Scgb1b24B1B0N6 92 aa16.45■□□□□ 0.22
Scn1b-201ENSMUST00000098548 Zfp867E9Q2M4 473 aa16.45■□□□□ 0.22
Scn1b-201ENSMUST00000098548 Gm9376G3UW68 176 aa16.45■□□□□ 0.22
Scn1b-201ENSMUST00000098548 SbpP15501 199 aa16.45■□□□□ 0.22
Scn1b-201ENSMUST00000098548 Ifi27l2bQ8VC49 283 aa16.45■□□□□ 0.22
Scn1b-201ENSMUST00000098548 PmvkQ9D1G2 192 aa16.45■□□□□ 0.22
Scn1b-201ENSMUST00000098548 Megf8P60882 2789 aa16.45■□□□□ 0.22
Scn1b-201ENSMUST00000098548 SpxD3Z752 116 aa16.44■□□□□ 0.22
Scn1b-201ENSMUST00000098548 Lypd5Q9D7Z7 256 aa16.44■□□□□ 0.22
Scn1b-201ENSMUST00000098548 Josd1Q9DBJ6 202 aa16.44■□□□□ 0.22
Scn1b-201ENSMUST00000098548 Trav3n-3A0A0G2JEM0 114 aa16.43■□□□□ 0.22
Scn1b-201ENSMUST00000098548 Rpl35aO55142 110 aa16.43■□□□□ 0.22
Scn1b-201ENSMUST00000098548 Q3UNZ8 350 aa16.43■□□□□ 0.22
Scn1b-201ENSMUST00000098548 PpbpQ9EQI5 113 aa16.43■□□□□ 0.22
Scn1b-201ENSMUST00000098548 Hspb8Q9JK92 196 aa16.43■□□□□ 0.22
Scn1b-201ENSMUST00000098548 P01738 130 aa16.43■□□□□ 0.22
Scn1b-201ENSMUST00000098548 Defb42Q8BVB5 75 aa16.43■□□□□ 0.22
Scn1b-201ENSMUST00000098548 Dnah10D3YYQ8 4591 aa16.42■□□□□ 0.22
Scn1b-201ENSMUST00000098548 Ube2cQ9D1C1 179 aa16.42■□□□□ 0.22
Scn1b-201ENSMUST00000098548 Pla2g1bQ9Z0Y2 146 aa16.42■□□□□ 0.22
Scn1b-201ENSMUST00000098548 Gm10490F6VBM2 120 aa16.41■□□□□ 0.22
Scn1b-201ENSMUST00000098548 PrlhG3UWC3 86 aa16.41■□□□□ 0.22
Scn1b-201ENSMUST00000098548 Nat8f4G5E8L3 226 aa16.41■□□□□ 0.22
Scn1b-201ENSMUST00000098548 P01736 120 aa16.41■□□□□ 0.22
Scn1b-201ENSMUST00000098548 Cib3Q0P523 160 aa16.41■□□□□ 0.22
Scn1b-201ENSMUST00000098548 Ovol2Q8CIV7 274 aa16.41■□□□□ 0.22
Scn1b-201ENSMUST00000098548 Foxi1Q922I5 372 aa16.41■□□□□ 0.22
Scn1b-201ENSMUST00000098548 Trav6-6A0A075B603 114 aa16.4■□□□□ 0.22
Scn1b-201ENSMUST00000098548 Vsig4F6TUL9 280 aa16.4■□□□□ 0.22
Scn1b-201ENSMUST00000098548 Gm5629P06327 117 aa16.4■□□□□ 0.22
Scn1b-201ENSMUST00000098548 Gm14137Q8CE97 175 aa16.4■□□□□ 0.22
Scn1b-201ENSMUST00000098548 Chac1Q8R3J5 223 aa16.4■□□□□ 0.22
Scn1b-201ENSMUST00000098548 Scgb1b19F6WYW0 93 aa16.39■□□□□ 0.21
Scn1b-201ENSMUST00000098548 Igll1P20764 209 aa16.39■□□□□ 0.21
Scn1b-201ENSMUST00000098548 SstP60041 116 aa16.39■□□□□ 0.21
Scn1b-201ENSMUST00000098548 Morn3Q8C5T4 241 aa16.39■□□□□ 0.21
Scn1b-201ENSMUST00000098548 Dkk2Q9QYZ8 259 aa16.39■□□□□ 0.21
Scn1b-201ENSMUST00000098548 Gm765B2RVL9 189 aa16.38■□□□□ 0.21
Scn1b-201ENSMUST00000098548 Gm3618D3Z4P5 127 aa16.38■□□□□ 0.21
Scn1b-201ENSMUST00000098548 Gm10509O88255 85 aa16.38■□□□□ 0.21
Scn1b-201ENSMUST00000098548 NpsP0C0P8 89 aa16.38■□□□□ 0.21
Scn1b-201ENSMUST00000098548 Cmc4Q61908 68 aa16.38■□□□□ 0.21
Scn1b-201ENSMUST00000098548 Polr2kQ63871 58 aa16.38■□□□□ 0.21
Scn1b-201ENSMUST00000098548 March3Q8BRX9 218 aa16.38■□□□□ 0.21
Scn1b-201ENSMUST00000098548 Gm2916Q9D9B9 127 aa16.38■□□□□ 0.21
Scn1b-201ENSMUST00000098548 Ighv1-85A0A075B5Y6 117 aa16.38■□□□□ 0.21
Scn1b-201ENSMUST00000098548 P06329 120 aa16.38■□□□□ 0.21
Scn1b-201ENSMUST00000098548 AngP21570 145 aa16.38■□□□□ 0.21
Scn1b-201ENSMUST00000098548 Krtap16-1A2A5X5 502 aa16.37■□□□□ 0.21
Scn1b-201ENSMUST00000098548 Defa34D3Z0J0 93 aa16.37■□□□□ 0.21
Scn1b-201ENSMUST00000098548 Defa37K9J724 93 aa16.37■□□□□ 0.21
Scn1b-201ENSMUST00000098548 Defa5P28312 93 aa16.37■□□□□ 0.21
Scn1b-201ENSMUST00000098548 Fgfbp3Q1HCM0 245 aa16.37■□□□□ 0.21
Scn1b-201ENSMUST00000098548 Trav3-3Q5R1C3 114 aa16.37■□□□□ 0.21
Scn1b-201ENSMUST00000098548 Htr1dQ61224 374 aa16.37■□□□□ 0.21
Scn1b-201ENSMUST00000098548 Prr3Q811B5 190 aaKnown RBP16.37■□□□□ 0.21
Scn1b-201ENSMUST00000098548 Prss29Q99MS4 279 aa16.37■□□□□ 0.21
Scn1b-201ENSMUST00000098548 Tcl1b4P56844 120 aa16.36■□□□□ 0.21
Scn1b-201ENSMUST00000098548 8030423J24RikQ9CX45 142 aa16.36■□□□□ 0.21
Scn1b-201ENSMUST00000098548 Lyzl4Q9D925 145 aa16.36■□□□□ 0.21
Scn1b-201ENSMUST00000098548 GfyJ3KML8 504 aa16.35■□□□□ 0.21
Scn1b-201ENSMUST00000098548 Gm1968Q3T9I3 115 aa16.35■□□□□ 0.21
Scn1b-201ENSMUST00000098548 Tcrg-V4A0A0B4J1J8 138 aa16.34■□□□□ 0.21
Scn1b-201ENSMUST00000098548 Egr2P08152 470 aa16.34■□□□□ 0.21
Retrieved 100 of 22,080 RNA–protein pairs in 55.6 ms