RNA–Protein interactions for RNA: ENSMUST00000033898.9

Col4a1-201, Transcript of Collagen alpha-1(IV) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col4a1, Length 6,615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1-201ENSMUST00000033898 Col4a5Q63ZW6 1691 aa11.14□□□□□ -0.63
Col4a1-201ENSMUST00000033898 Ccl25O35903 144 aa11.13□□□□□ -0.63
Col4a1-201ENSMUST00000033898 Gm9949Q8C9F4 104 aa11.13□□□□□ -0.63
Col4a1-201ENSMUST00000033898 Igkv4-92A0A0B4J1I2 117 aa11.13□□□□□ -0.63
Col4a1-201ENSMUST00000033898 Fstl3Q9EQC7 256 aa11.13□□□□□ -0.63
Col4a1-201ENSMUST00000033898 FancmQ8BGE5 2021 aa11.13□□□□□ -0.63
Col4a1-201ENSMUST00000033898 Odf1Q61999 247 aa11.13□□□□□ -0.63
Col4a1-201ENSMUST00000033898 Esm1Q9QYY7 184 aa11.13□□□□□ -0.63
Col4a1-201ENSMUST00000033898 Q8C708 225 aa11.13□□□□□ -0.63
Col4a1-201ENSMUST00000033898 Ighv1-62-1A0A075B5U3 116 aa11.12□□□□□ -0.63
Col4a1-201ENSMUST00000033898 Fam222aQ6PGH4 453 aa11.12□□□□□ -0.63
Col4a1-201ENSMUST00000033898 SptssbQ925E8 76 aa11.12□□□□□ -0.63
Col4a1-201ENSMUST00000033898 AcacaQ5SWU9 2345 aa11.12□□□□□ -0.63
Col4a1-201ENSMUST00000033898 Heatr5aQ5PRF0 2038 aa11.12□□□□□ -0.63
Col4a1-201ENSMUST00000033898 Tm2d1Q99MB3 208 aa11.12□□□□□ -0.63
Col4a1-201ENSMUST00000033898 Rspo3Q2TJ95 277 aa11.12□□□□□ -0.63
Col4a1-201ENSMUST00000033898 Wfdc2Q9DAU7 174 aa11.11□□□□□ -0.63
Col4a1-201ENSMUST00000033898 Tnrc6aQ3UHK8 1896 aaKnown RBP11.11□□□□□ -0.63
Col4a1-201ENSMUST00000033898 Gm10542F6XDR3 90 aa11.11□□□□□ -0.63
Col4a1-201ENSMUST00000033898 Ndufb4Q9CQC7 129 aa11.11□□□□□ -0.63
Col4a1-201ENSMUST00000033898 Mrpl35Q9CQL6 188 aa11.11□□□□□ -0.63
Col4a1-201ENSMUST00000033898 Thsd7bQ6P4U0 1607 aa11.11□□□□□ -0.63
Col4a1-201ENSMUST00000033898 Ighv2-7A0A075B5Q8 116 aa11.11□□□□□ -0.63
Col4a1-201ENSMUST00000033898 Frem1Q684R7 2191 aa11.11□□□□□ -0.63
Col4a1-201ENSMUST00000033898 Trav12-3A0A075B648 115 aa11.11□□□□□ -0.63
Col4a1-201ENSMUST00000033898 Ighv8-12A0A0G2JDE1 119 aa11.11□□□□□ -0.63
Col4a1-201ENSMUST00000033898 Trav7-6A0A075B640 112 aa11.1□□□□□ -0.63
Col4a1-201ENSMUST00000033898 Cdpf1Q8R3A2 119 aa11.1□□□□□ -0.63
Col4a1-201ENSMUST00000033898 Ighv12-3A0A075B5T1 117 aa11.1□□□□□ -0.63
Col4a1-201ENSMUST00000033898 Trav9n-4A0A075B631 113 aa11.1□□□□□ -0.63
Col4a1-201ENSMUST00000033898 1810032O08RikE9PZV8 113 aa11.09□□□□□ -0.63
Col4a1-201ENSMUST00000033898 AtrxQ61687 2476 aaKnown RBP11.09□□□□□ -0.63
Col4a1-201ENSMUST00000033898 Fancd2osQ9D4K4 178 aa11.09□□□□□ -0.63
Col4a1-201ENSMUST00000033898 Gm37389A0A0A6YW05 95 aa11.09□□□□□ -0.63
Col4a1-201ENSMUST00000033898 Plxna3P70208 1872 aa11.09□□□□□ -0.63
Col4a1-201ENSMUST00000033898 Cacna1gQ5SUF7 2381 aa11.08□□□□□ -0.64
Col4a1-201ENSMUST00000033898 Gm10638F6QEG2 257 aa11.08□□□□□ -0.64
Col4a1-201ENSMUST00000033898 AngP21570 145 aa11.08□□□□□ -0.64
Col4a1-201ENSMUST00000033898 Fam19a4Q7TPG5 135 aa11.08□□□□□ -0.64
Col4a1-201ENSMUST00000033898 Rnf138Q9CQE0 245 aaKnown RBP11.08□□□□□ -0.64
Col4a1-201ENSMUST00000033898 Q99M08 65 aa11.08□□□□□ -0.64
Col4a1-201ENSMUST00000033898 PscaP57096 123 aa11.08□□□□□ -0.64
Col4a1-201ENSMUST00000033898 Prpf8Q99PV0 2335 aaKnown RBP11.08□□□□□ -0.64
Col4a1-201ENSMUST00000033898 Fgf6P21658 208 aa11.07□□□□□ -0.64
Col4a1-201ENSMUST00000033898 Pcnx1Q9QYC1 2344 aa11.07□□□□□ -0.64
Col4a1-201ENSMUST00000033898 9230109A22RikQ8BHE6 111 aa11.07□□□□□ -0.64
Col4a1-201ENSMUST00000033898 Oxld1Q9CR10 201 aa11.07□□□□□ -0.64
Col4a1-201ENSMUST00000033898 1500011B03RikQ3TTH7 73 aa11.06□□□□□ -0.64
Col4a1-201ENSMUST00000033898 ColqO35348 457 aa11.06□□□□□ -0.64
Col4a1-201ENSMUST00000033898 Gp9O88186 177 aa11.06□□□□□ -0.64
Col4a1-201ENSMUST00000033898 Fam241bQ9D882 120 aa11.06□□□□□ -0.64
Col4a1-201ENSMUST00000033898 Atg2aQ6P4T0 1914 aa11.06□□□□□ -0.64
Col4a1-201ENSMUST00000033898 Vpreb3D3Z6J4 130 aa11.06□□□□□ -0.64
Col4a1-201ENSMUST00000033898 Greb1Q3UHK3 1954 aa11.05□□□□□ -0.64
Col4a1-201ENSMUST00000033898 Col6a4A2AX52 2309 aa11.05□□□□□ -0.64
Col4a1-201ENSMUST00000033898 Nup210lQ9D2F7 1881 aa11.05□□□□□ -0.64
Col4a1-201ENSMUST00000033898 4930470P17RikQ9D542 155 aa11.05□□□□□ -0.64
Col4a1-201ENSMUST00000033898 Fam19a1Q7TPG8 133 aa11.04□□□□□ -0.64
Col4a1-201ENSMUST00000033898 Naa38Q9D2U5 125 aa11.04□□□□□ -0.64
Col4a1-201ENSMUST00000033898 Lhfpl1Q80SV1 220 aa11.04□□□□□ -0.64
Col4a1-201ENSMUST00000033898 Trav6n-6A0A075B6B2 114 aa11.04□□□□□ -0.64
Col4a1-201ENSMUST00000033898 Gm15557A6PWY0 234 aa11.04□□□□□ -0.64
Col4a1-201ENSMUST00000033898 Ighv1-53A0A075B5W3 117 aa11.03□□□□□ -0.64
Col4a1-201ENSMUST00000033898 P01748 117 aa11.03□□□□□ -0.64
Col4a1-201ENSMUST00000033898 Gata3P23772 443 aa11.03□□□□□ -0.64
Col4a1-201ENSMUST00000033898 Sec61gP60060 68 aa11.03□□□□□ -0.64
Col4a1-201ENSMUST00000033898 P84751 237 aa11.03□□□□□ -0.64
Col4a1-201ENSMUST00000033898 Gphb5Q812B2 130 aa11.03□□□□□ -0.64
Col4a1-201ENSMUST00000033898 Pcdh15Q99PJ1 1943 aa11.03□□□□□ -0.64
Col4a1-201ENSMUST00000033898 Igkv1-117A0A140T8M0 119 aa11.03□□□□□ -0.64
Col4a1-201ENSMUST00000033898 Gm42674D3YUT9 64 aa11.03□□□□□ -0.64
Col4a1-201ENSMUST00000033898 Fam110aQ8R184 296 aa11.03□□□□□ -0.64
Col4a1-201ENSMUST00000033898 Tet1Q3URK3 2007 aaKnown RBP11.02□□□□□ -0.64
Col4a1-201ENSMUST00000033898 1700074P13RikQ9D9G7 251 aa11.02□□□□□ -0.65
Col4a1-201ENSMUST00000033898 Rnase1P00683 149 aa11.02□□□□□ -0.65
Col4a1-201ENSMUST00000033898 Plxnb1Q8CJH3 2119 aa11.02□□□□□ -0.65
Col4a1-201ENSMUST00000033898 Rpl39lQ9CQD0 51 aa11.02□□□□□ -0.65
Col4a1-201ENSMUST00000033898 Iglc1A0A0G2JE99 106 aa11.02□□□□□ -0.65
Col4a1-201ENSMUST00000033898 Gm17521F6QAC8 156 aa11.02□□□□□ -0.65
Col4a1-201ENSMUST00000033898 P01843 105 aa11.02□□□□□ -0.65
Col4a1-201ENSMUST00000033898 Vsig4F6TUL9 280 aa11.01□□□□□ -0.65
Col4a1-201ENSMUST00000033898 Igkv8-21A0A140T8P7 120 aa11.01□□□□□ -0.65
Col4a1-201ENSMUST00000033898 2010109I03RikQ9CQ11 111 aa11.01□□□□□ -0.65
Col4a1-201ENSMUST00000033898 Trav11A0A0B4J1J9 114 aa11.01□□□□□ -0.65
Col4a1-201ENSMUST00000033898 Defb13Q8R2I4 64 aa11□□□□□ -0.65
Col4a1-201ENSMUST00000033898 Sdk2Q6V4S5 2176 aa11□□□□□ -0.65
Col4a1-201ENSMUST00000033898 P04940 107 aa11□□□□□ -0.65
Col4a1-201ENSMUST00000033898 P04941 107 aa11□□□□□ -0.65
Col4a1-201ENSMUST00000033898 Plxna4Q80UG2 1893 aa11□□□□□ -0.65
Col4a1-201ENSMUST00000033898 Gm6034E9Q101 117 aa11□□□□□ -0.65
Col4a1-201ENSMUST00000033898 Gm19684G3UZ45 117 aa11□□□□□ -0.65
Col4a1-201ENSMUST00000033898 P01747 120 aa11□□□□□ -0.65
Col4a1-201ENSMUST00000033898 Gm9936Q8C864 160 aa10.99□□□□□ -0.65
Col4a1-201ENSMUST00000033898 Abca4O35600 2310 aa10.99□□□□□ -0.65
Col4a1-201ENSMUST00000033898 MsmpB1AWI6 139 aa10.99□□□□□ -0.65
Col4a1-201ENSMUST00000033898 CrygcQ61597 174 aa10.98□□□□□ -0.65
Col4a1-201ENSMUST00000033898 Trav12d-3A0A075B6A4 115 aa10.98□□□□□ -0.65
Col4a1-201ENSMUST00000033898 Gm20708H3BKF4 155 aa10.98□□□□□ -0.65
Col4a1-201ENSMUST00000033898 Igkv1-110A0A0B4J1I0 119 aa10.97□□□□□ -0.65
Col4a1-201ENSMUST00000033898 Eml5Q8BQM8 1977 aa10.97□□□□□ -0.65
Retrieved 100 of 22,080 RNA–protein pairs in 63.6 ms