RNA–Protein interactions for RNA: ENSMUST00000033898.9

Col4a1-201, Transcript of Collagen alpha-1(IV) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col4a1, Length 6,615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1-201ENSMUST00000033898 Rhox8Q6VSS7 320 aa25.5■■□□□ 1.67
Col4a1-201ENSMUST00000033898 Ehmt2Q9Z148 1263 aaKnown RBP23.45■■□□□ 1.34
Col4a1-201ENSMUST00000033898 Wdr66E9Q743 1299 aa22.78■■□□□ 1.24
Col4a1-201ENSMUST00000033898 Ube2uB1AUC4 352 aa22.73■■□□□ 1.23
Col4a1-201ENSMUST00000033898 Rpgrip1Q9EPQ2 1331 aa22.67■■□□□ 1.22
Col4a1-201ENSMUST00000033898 Cngb1E1AZ71 1325 aa22.57■■□□□ 1.2
Col4a1-201ENSMUST00000033898 Esf1Q3V1V3 845 aaKnown RBP22.52■■□□□ 1.2
Col4a1-201ENSMUST00000033898 Ccdc136Q3TVA9 1136 aa22.52■■□□□ 1.19
Col4a1-201ENSMUST00000033898 Las1lA2BE28 776 aaKnown RBP22.47■■□□□ 1.19
Col4a1-201ENSMUST00000033898 Zeb1Q64318 1117 aa22.44■■□□□ 1.18
Col4a1-201ENSMUST00000033898 Gab3Q8BSM5 595 aa22.35■■□□□ 1.17
Col4a1-201ENSMUST00000033898 Pelp1Q9DBD5 1123 aaKnown RBP22.28■■□□□ 1.16
Col4a1-201ENSMUST00000033898 Npm2Q80W85 207 aa22.14■■□□□ 1.14
Col4a1-201ENSMUST00000033898 Myt1lP97500 1187 aa22.06■■□□□ 1.12
Col4a1-201ENSMUST00000033898 Amer1Q7TS75 1132 aa21.97■■□□□ 1.11
Col4a1-201ENSMUST00000033898 Slc24a1Q91WD8 1130 aa21.75■■□□□ 1.07
Col4a1-201ENSMUST00000033898 Trim41Q5NCC3 630 aa21.6■■□□□ 1.05
Col4a1-201ENSMUST00000033898 UbtfP25976 765 aaKnown RBP21.52■■□□□ 1.04
Col4a1-201ENSMUST00000033898 CenpbP27790 599 aa21.37■■□□□ 1.01
Col4a1-201ENSMUST00000033898 Ttbk1Q6PCN3 1308 aa21.34■■□□□ 1.01
Col4a1-201ENSMUST00000033898 Il27Q8K3I6 234 aa21.16■□□□□ 0.98
Col4a1-201ENSMUST00000033898 Neurod1Q60867 357 aa21.09■□□□□ 0.97
Col4a1-201ENSMUST00000033898 Stra8P70278 393 aa21.08■□□□□ 0.97
Col4a1-201ENSMUST00000033898 Ap3b1Q9Z1T1 1105 aa21.02■□□□□ 0.96
Col4a1-201ENSMUST00000033898 Ppargc1bQ8VHJ7 1014 aa20.97■□□□□ 0.95
Col4a1-201ENSMUST00000033898 NefmP08553 848 aa20.96■□□□□ 0.95
Col4a1-201ENSMUST00000033898 4933416C03RikQ3V063 378 aa20.96■□□□□ 0.95
Col4a1-201ENSMUST00000033898 Acin1Q9JIX8 1338 aaKnown RBP20.96■□□□□ 0.95
Col4a1-201ENSMUST00000033898 Eif5bQ05D44 1216 aaKnown RBP20.96■□□□□ 0.95
Col4a1-201ENSMUST00000033898 4930567H17RikQ3V0K5 233 aa20.95■□□□□ 0.94
Col4a1-201ENSMUST00000033898 Os9Q8K2C7 672 aa20.93■□□□□ 0.94
Col4a1-201ENSMUST00000033898 Fam50aQ9WV03 339 aaKnown RBP20.87■□□□□ 0.93
Col4a1-201ENSMUST00000033898 NrdcQ8BHG1 1161 aa20.8■□□□□ 0.92
Col4a1-201ENSMUST00000033898 Cdk11bP24788 784 aaKnown RBP20.76■□□□□ 0.91
Col4a1-201ENSMUST00000033898 NclP09405 707 aaKnown RBP20.73■□□□□ 0.91
Col4a1-201ENSMUST00000033898 NeflP08551 543 aa20.7■□□□□ 0.9
Col4a1-201ENSMUST00000033898 Anp32bQ9EST5 272 aaKnown RBP20.66■□□□□ 0.9
Col4a1-201ENSMUST00000033898 Zbtb7cQ8VCZ7 619 aa20.62■□□□□ 0.89
Col4a1-201ENSMUST00000033898 NischQ80TM9 1593 aa20.57■□□□□ 0.88
Col4a1-201ENSMUST00000033898 Chic1Q8CBW7 227 aa20.54■□□□□ 0.88
Col4a1-201ENSMUST00000033898 HrcG5E8J6 738 aa20.53■□□□□ 0.88
Col4a1-201ENSMUST00000033898 Nop58Q6DFW4 536 aaKnown RBP20.5■□□□□ 0.87
Col4a1-201ENSMUST00000033898 Pcgf6Q99NA9 353 aa20.41■□□□□ 0.86
Col4a1-201ENSMUST00000033898 Zbtb4Q5F293 982 aa20.37■□□□□ 0.85
Col4a1-201ENSMUST00000033898 Ifnlr1Q8CGK5 535 aa20.36■□□□□ 0.85
Col4a1-201ENSMUST00000033898 Tnnt3Q9QZ47 272 aa20.35■□□□□ 0.85
Col4a1-201ENSMUST00000033898 Gm13697A2AK42 830 aa20.3■□□□□ 0.84
Col4a1-201ENSMUST00000033898 Hnrnpul2Q00PI9 745 aaKnown RBP20.28■□□□□ 0.84
Col4a1-201ENSMUST00000033898 Prdm10Q3UTQ7 1184 aa20.27■□□□□ 0.84
Col4a1-201ENSMUST00000033898 TonslQ6NZL6 1363 aa20.24■□□□□ 0.83
Col4a1-201ENSMUST00000033898 Supt5hO55201 1082 aaKnown RBP20.21■□□□□ 0.83
Col4a1-201ENSMUST00000033898 Lmod2Q3UHZ5 550 aa20.19■□□□□ 0.82
Col4a1-201ENSMUST00000033898 Atp1b4Q99ME6 356 aa20.17■□□□□ 0.82
Col4a1-201ENSMUST00000033898 Erich6D3Z6S9 713 aa20.13■□□□□ 0.81
Col4a1-201ENSMUST00000033898 Ccdc180J3QNE4 1664 aa20.12■□□□□ 0.81
Col4a1-201ENSMUST00000033898 Zcchc6Q5BLK4 1491 aaKnown RBP20.12■□□□□ 0.81
Col4a1-201ENSMUST00000033898 ArxO35085 564 aa20.12■□□□□ 0.81
Col4a1-201ENSMUST00000033898 Plppr3Q7TPB0 716 aa20.11■□□□□ 0.81
Col4a1-201ENSMUST00000033898 Polr3glQ8R0C0 218 aa20.11■□□□□ 0.81
Col4a1-201ENSMUST00000033898 Gm35339A0A140LHH9 1649 aa20.1■□□□□ 0.81
Col4a1-201ENSMUST00000033898 Mapk8ip2Q9ERE9 830 aa20.07■□□□□ 0.8
Col4a1-201ENSMUST00000033898 Myt1Q8CFC2 1127 aa20.05■□□□□ 0.8
Col4a1-201ENSMUST00000033898 DaxxO35613 739 aa20■□□□□ 0.79
Col4a1-201ENSMUST00000033898 Mier1Q5UAK0 511 aa20■□□□□ 0.79
Col4a1-201ENSMUST00000033898 Nlrp6Q91WS2 869 aa20■□□□□ 0.79
Col4a1-201ENSMUST00000033898 Plekhg3Q4VAC9 1341 aa19.97■□□□□ 0.79
Col4a1-201ENSMUST00000033898 Rangap1P46061 589 aaKnown RBP19.95■□□□□ 0.78
Col4a1-201ENSMUST00000033898 Abcc9P70170 1546 aa19.95■□□□□ 0.78
Col4a1-201ENSMUST00000033898 Gm13695A2AK44 830 aa19.92■□□□□ 0.78
Col4a1-201ENSMUST00000033898 Gm38655A0A286YDK6 273 aa19.89■□□□□ 0.77
Col4a1-201ENSMUST00000033898 Fkbp15Q6P9Q6 1216 aaKnown RBP19.86■□□□□ 0.77
Col4a1-201ENSMUST00000033898 Csrnp3P59055 597 aa19.86■□□□□ 0.77
Col4a1-201ENSMUST00000033898 Npm1Q61937 292 aaKnown RBP19.83■□□□□ 0.77
Col4a1-201ENSMUST00000033898 Rtl5Q5DTT4 599 aa19.75■□□□□ 0.75
Col4a1-201ENSMUST00000033898 DiexfQ8BTT6 772 aaKnown RBP19.74■□□□□ 0.75
Col4a1-201ENSMUST00000033898 Eid3Q3V124 375 aa19.7■□□□□ 0.74
Col4a1-201ENSMUST00000033898 Anp32aO35381 247 aa19.68■□□□□ 0.74
Col4a1-201ENSMUST00000033898 Rtl1Q7M732 1744 aa19.66■□□□□ 0.74
Col4a1-201ENSMUST00000033898 Ythdc1E9Q5K9 736 aaKnown RBP19.64■□□□□ 0.74
Col4a1-201ENSMUST00000033898 CatipB9EKE5 520 aa19.61■□□□□ 0.73
Col4a1-201ENSMUST00000033898 ClspnQ80YR7 1315 aa19.58■□□□□ 0.73
Col4a1-201ENSMUST00000033898 Rad21Q61550 635 aaKnown RBP19.53■□□□□ 0.72
Col4a1-201ENSMUST00000033898 Vsig10D3YX43 558 aa19.51■□□□□ 0.71
Col4a1-201ENSMUST00000033898 Lmod3E9QA62 571 aa19.48■□□□□ 0.71
Col4a1-201ENSMUST00000033898 Upf2A2AT37 1269 aaKnown RBP19.4■□□□□ 0.7
Col4a1-201ENSMUST00000033898 Ppp4r2Q0VGB7 417 aa19.38■□□□□ 0.69
Col4a1-201ENSMUST00000033898 Trim26Q99PN3 545 aa19.37■□□□□ 0.69
Col4a1-201ENSMUST00000033898 Irx6Q9ER75 438 aa19.37■□□□□ 0.69
Col4a1-201ENSMUST00000033898 Hsp90aa1P07901 733 aaKnown RBP19.37■□□□□ 0.69
Col4a1-201ENSMUST00000033898 DekQ7TNV0 380 aaKnown RBP19.35■□□□□ 0.69
Col4a1-201ENSMUST00000033898 Chic2Q9D9G3 165 aa19.33■□□□□ 0.69
Col4a1-201ENSMUST00000033898 P3h3Q8CG70 732 aa19.32■□□□□ 0.68
Col4a1-201ENSMUST00000033898 Safb2Q80YR5 991 aaKnown RBP19.31■□□□□ 0.68
Col4a1-201ENSMUST00000033898 Sall2Q9QX96 1004 aa19.24■□□□□ 0.67
Col4a1-201ENSMUST00000033898 Fgd1P52734 960 aa19.24■□□□□ 0.67
Col4a1-201ENSMUST00000033898 Calr4Q3TQS0 420 aa19.22■□□□□ 0.67
Col4a1-201ENSMUST00000033898 Clip1Q922J3 1391 aa19.21■□□□□ 0.67
Col4a1-201ENSMUST00000033898 Arid4bA2CG63 1314 aaKnown RBP19.21■□□□□ 0.67
Col4a1-201ENSMUST00000033898 Hdac5Q9Z2V6 1113 aa19.2■□□□□ 0.66
Col4a1-201ENSMUST00000033898 Mrs2Q5NCE8 434 aa19.09■□□□□ 0.65
Retrieved 100 of 22,080 RNA–protein pairs in 33.7 ms