RNA–Protein interactions for RNA: ENSMUST00000027127.13

Sf3b1-201, Transcript of Splicing factor 3B subunit 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sf3b1, Length 6,195 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1-201ENSMUST00000027127 Snai3Q9QY31 287 aa6.43□□□□□ -1.38
Sf3b1-201ENSMUST00000027127 Dpm2Q9Z324 84 aa6.43□□□□□ -1.38
Sf3b1-201ENSMUST00000027127 Ncoa6Q9JL19 2067 aa6.43□□□□□ -1.38
Sf3b1-201ENSMUST00000027127 LeprotO89013 131 aa6.43□□□□□ -1.38
Sf3b1-201ENSMUST00000027127 P01786 117 aa6.43□□□□□ -1.38
Sf3b1-201ENSMUST00000027127 Igkv4-54A0A0G2JES9 117 aa6.43□□□□□ -1.38
Sf3b1-201ENSMUST00000027127 Pxt1Q8K459 51 aa6.43□□□□□ -1.38
Sf3b1-201ENSMUST00000027127 Igkv4-72A0A0B4J1I4 117 aa6.42□□□□□ -1.38
Sf3b1-201ENSMUST00000027127 Ube2wQ8VDW4 151 aa6.42□□□□□ -1.38
Sf3b1-201ENSMUST00000027127 Ankrd39Q9D2X0 183 aa6.42□□□□□ -1.38
Sf3b1-201ENSMUST00000027127 Ighv3-3A0A0A6YWL2 116 aa6.42□□□□□ -1.38
Sf3b1-201ENSMUST00000027127 PlaurP35456 327 aa6.42□□□□□ -1.38
Sf3b1-201ENSMUST00000027127 Reg3dQ9QUS9 175 aa6.42□□□□□ -1.38
Sf3b1-201ENSMUST00000027127 Cdh23Q99PF4 3354 aa6.42□□□□□ -1.38
Sf3b1-201ENSMUST00000027127 F5O88783 2183 aa6.42□□□□□ -1.38
Sf3b1-201ENSMUST00000027127 P01811 117 aa6.42□□□□□ -1.38
Sf3b1-201ENSMUST00000027127 Ca1P13634 261 aa6.42□□□□□ -1.38
Sf3b1-201ENSMUST00000027127 Fhl1P97447 280 aaKnown RBP6.42□□□□□ -1.38
Sf3b1-201ENSMUST00000027127 Tm4sf20Q9CQY8 226 aa6.42□□□□□ -1.38
Sf3b1-201ENSMUST00000027127 Spata25Q9DA57 226 aa6.42□□□□□ -1.38
Sf3b1-201ENSMUST00000027127 Vsig4F6TUL9 280 aa6.42□□□□□ -1.38
Sf3b1-201ENSMUST00000027127 Gm10604Q3V0X7 143 aa6.42□□□□□ -1.38
Sf3b1-201ENSMUST00000027127 Samd5Q3V1H9 173 aa6.42□□□□□ -1.38
Sf3b1-201ENSMUST00000027127 Olfr313Q5NC55 308 aa6.42□□□□□ -1.38
Sf3b1-201ENSMUST00000027127 Q9DAB9 146 aa6.42□□□□□ -1.38
Sf3b1-201ENSMUST00000027127 Inafm2A0A1L1STD6 152 aa6.42□□□□□ -1.38
Sf3b1-201ENSMUST00000027127 Gm26727M0QWT1 121 aa6.42□□□□□ -1.38
Sf3b1-201ENSMUST00000027127 Morn3Q8C5T4 241 aa6.42□□□□□ -1.38
Sf3b1-201ENSMUST00000027127 Reg3gO09049 174 aa6.41□□□□□ -1.38
Sf3b1-201ENSMUST00000027127 Edn2P22389 175 aa6.41□□□□□ -1.38
Sf3b1-201ENSMUST00000027127 PkigO70139 76 aa6.41□□□□□ -1.38
Sf3b1-201ENSMUST00000027127 Dscaml1Q4VA61 2053 aa6.41□□□□□ -1.38
Sf3b1-201ENSMUST00000027127 Ep300B2RWS6 2412 aa6.41□□□□□ -1.38
Sf3b1-201ENSMUST00000027127 Ighv2-7A0A075B5Q8 116 aa6.41□□□□□ -1.38
Sf3b1-201ENSMUST00000027127 E130218I03RikA0A0U1RNU5 63 aa6.41□□□□□ -1.38
Sf3b1-201ENSMUST00000027127 P06330 118 aa6.41□□□□□ -1.38
Sf3b1-201ENSMUST00000027127 Fxyd7P59648 80 aa6.41□□□□□ -1.38
Sf3b1-201ENSMUST00000027127 MdfiP70331 251 aa6.41□□□□□ -1.38
Sf3b1-201ENSMUST00000027127 Rnf183Q8QZS5 190 aa6.41□□□□□ -1.38
Sf3b1-201ENSMUST00000027127 HampQ9EQ21 83 aa6.41□□□□□ -1.38
Sf3b1-201ENSMUST00000027127 Igkv4-79A0A075B5L8 119 aa6.4□□□□□ -1.38
Sf3b1-201ENSMUST00000027127 Szt2A2A9C3 3431 aa6.4□□□□□ -1.38
Sf3b1-201ENSMUST00000027127 Trav9-2A0A075B647 113 aa6.4□□□□□ -1.38
Sf3b1-201ENSMUST00000027127 Trav9-4A0A0B4J1K2 113 aa6.4□□□□□ -1.38
Sf3b1-201ENSMUST00000027127 Xcl1P47993 114 aa6.4□□□□□ -1.38
Sf3b1-201ENSMUST00000027127 Rs1Q9Z1L4 224 aa6.4□□□□□ -1.38
Sf3b1-201ENSMUST00000027127 Trav4n-4A0A075B615 110 aa6.4□□□□□ -1.38
Sf3b1-201ENSMUST00000027127 Igkv4-78A0A0A6YYE5 119 aa6.4□□□□□ -1.39
Sf3b1-201ENSMUST00000027127 Clec4b2Q67DU8 208 aa6.4□□□□□ -1.39
Sf3b1-201ENSMUST00000027127 SpinklQ8CEK3 90 aa6.4□□□□□ -1.39
Sf3b1-201ENSMUST00000027127 Zc2hc1bQ9D534 172 aa6.4□□□□□ -1.39
Sf3b1-201ENSMUST00000027127 CckP09240 115 aa6.4□□□□□ -1.39
Sf3b1-201ENSMUST00000027127 Pla2g2eQ9QUL3 142 aa6.4□□□□□ -1.39
Sf3b1-201ENSMUST00000027127 NpsP0C0P8 89 aa6.39□□□□□ -1.39
Sf3b1-201ENSMUST00000027127 Ndufs7Q9DC70 224 aa6.39□□□□□ -1.39
Sf3b1-201ENSMUST00000027127 Abca1P41233 2261 aa6.39□□□□□ -1.39
Sf3b1-201ENSMUST00000027127 Fam208bQ5DTT3 2382 aa6.39□□□□□ -1.39
Sf3b1-201ENSMUST00000027127 P01794 123 aa6.39□□□□□ -1.39
Sf3b1-201ENSMUST00000027127 Tcf24V9GWT9 166 aa6.39□□□□□ -1.39
Sf3b1-201ENSMUST00000027127 Spg11Q3UHA3 2430 aa6.39□□□□□ -1.39
Sf3b1-201ENSMUST00000027127 Brd3osA0A1B0GRB6 84 aa6.39□□□□□ -1.39
Sf3b1-201ENSMUST00000027127 P06328 117 aa6.39□□□□□ -1.39
Sf3b1-201ENSMUST00000027127 Tax1bp3Q9DBG9 124 aa6.39□□□□□ -1.39
Sf3b1-201ENSMUST00000027127 Armcx4E9PWM3 2356 aa6.39□□□□□ -1.39
Sf3b1-201ENSMUST00000027127 Gphb5Q812B2 130 aa6.39□□□□□ -1.39
Sf3b1-201ENSMUST00000027127 Mustn1Q99JI1 82 aa6.39□□□□□ -1.39
Sf3b1-201ENSMUST00000027127 Col12a1Q60847 3120 aa6.39□□□□□ -1.39
Sf3b1-201ENSMUST00000027127 Smim10l1A0A087WNQ7 89 aa6.39□□□□□ -1.39
Sf3b1-201ENSMUST00000027127 AcacbE9Q4Z2 2448 aa6.38□□□□□ -1.39
Sf3b1-201ENSMUST00000027127 Igkv8-16A0A0G2JDG9 121 aa6.38□□□□□ -1.39
Sf3b1-201ENSMUST00000027127 Rtl10D3YWW5 146 aa6.38□□□□□ -1.39
Sf3b1-201ENSMUST00000027127 Dand5Q76LW6 185 aa6.38□□□□□ -1.39
Sf3b1-201ENSMUST00000027127 Igkv4-69A0A0B4J1I6 116 aa6.38□□□□□ -1.39
Sf3b1-201ENSMUST00000027127 4930546C10RikE9Q4Y3 121 aa6.38□□□□□ -1.39
Sf3b1-201ENSMUST00000027127 8030423J24RikQ9CX45 142 aa6.38□□□□□ -1.39
Sf3b1-201ENSMUST00000027127 Ighv6-7A0A0A6YWU3 119 aa6.38□□□□□ -1.39
Sf3b1-201ENSMUST00000027127 P01738 130 aa6.38□□□□□ -1.39
Sf3b1-201ENSMUST00000027127 P01753 117 aa6.38□□□□□ -1.39
Sf3b1-201ENSMUST00000027127 Psmb11Q8BG41 302 aa6.38□□□□□ -1.39
Sf3b1-201ENSMUST00000027127 Timm17aQ9Z0V8 171 aa6.38□□□□□ -1.39
Sf3b1-201ENSMUST00000027127 Psmb8P28063 276 aa6.38□□□□□ -1.39
Sf3b1-201ENSMUST00000027127 Ubl5Q9EPV8 73 aa6.38□□□□□ -1.39
Sf3b1-201ENSMUST00000027127 DysfQ9ESD7 2090 aa6.38□□□□□ -1.39
Sf3b1-201ENSMUST00000027127 Ighv2-3A0A075B696 115 aa6.38□□□□□ -1.39
Sf3b1-201ENSMUST00000027127 Ighv1-62-2A0A0A6YXZ4 119 aa6.38□□□□□ -1.39
Sf3b1-201ENSMUST00000027127 1810032O08RikE9PZV8 113 aa6.38□□□□□ -1.39
Sf3b1-201ENSMUST00000027127 Lyrm9Q3UN90 78 aa6.38□□□□□ -1.39
Sf3b1-201ENSMUST00000027127 Gm6040Q4QY32 63 aa6.38□□□□□ -1.39
Sf3b1-201ENSMUST00000027127 Prr3Q811B5 190 aaKnown RBP6.38□□□□□ -1.39
Sf3b1-201ENSMUST00000027127 Lage3Q9CR70 148 aa6.38□□□□□ -1.39
Sf3b1-201ENSMUST00000027127 Ss18l2Q9D174 77 aa6.37□□□□□ -1.39
Sf3b1-201ENSMUST00000027127 Wfdc2Q9DAU7 174 aa6.37□□□□□ -1.39
Sf3b1-201ENSMUST00000027127 Ighv1-63A0A075B5X2 117 aa6.37□□□□□ -1.39
Sf3b1-201ENSMUST00000027127 Cox11Q6P8I6 275 aa6.37□□□□□ -1.39
Sf3b1-201ENSMUST00000027127 Cdpf1Q8R3A2 119 aa6.37□□□□□ -1.39
Sf3b1-201ENSMUST00000027127 Dopey2Q3UHQ6 2295 aa6.37□□□□□ -1.39
Sf3b1-201ENSMUST00000027127 Mrpl55Q9CZ83 127 aa6.37□□□□□ -1.39
Sf3b1-201ENSMUST00000027127 Ighv1-66A0A075B5X5 117 aa6.37□□□□□ -1.39
Sf3b1-201ENSMUST00000027127 Igkv4-58A0A0G2JGI6 119 aa6.37□□□□□ -1.39
Sf3b1-201ENSMUST00000027127 Gm815Q3UWS2 115 aa6.37□□□□□ -1.39
Retrieved 100 of 22,080 RNA–protein pairs in 46.1 ms