RNA–Protein interactions for RNA: ENSMUST00000171404.7

Gtf3c4-204, Transcript of General transcription factor 3C polypeptide 4, mousemouse

TSL 1 (best) BASIC

Gene Gtf3c4, Length 7,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c4-204ENSMUST00000171404 Tomm6Q9CQN3 74 aa12.42□□□□□ -0.42
Gtf3c4-204ENSMUST00000171404 Tmem14cQ9CQN6 114 aa12.42□□□□□ -0.42
Gtf3c4-204ENSMUST00000171404 Gm4861Q8C5A4 106 aa12.42□□□□□ -0.42
Gtf3c4-204ENSMUST00000171404 Vopp1Q8R1C3 172 aa12.42□□□□□ -0.42
Gtf3c4-204ENSMUST00000171404 Gm20379A0A087WR34 119 aa12.41□□□□□ -0.42
Gtf3c4-204ENSMUST00000171404 Dazap2Q9DCP9 168 aa12.41□□□□□ -0.42
Gtf3c4-204ENSMUST00000171404 Klhdc3Q8VEM9 382 aa12.41□□□□□ -0.42
Gtf3c4-204ENSMUST00000171404 Tnfrsf26P83626 204 aa12.41□□□□□ -0.42
Gtf3c4-204ENSMUST00000171404 Q08AU9 97 aa12.41□□□□□ -0.42
Gtf3c4-204ENSMUST00000171404 Col4a5Q63ZW6 1691 aa12.41□□□□□ -0.42
Gtf3c4-204ENSMUST00000171404 Gm20499D3Z4G5 72 aa12.41□□□□□ -0.42
Gtf3c4-204ENSMUST00000171404 Loxl1P97873 607 aa12.41□□□□□ -0.42
Gtf3c4-204ENSMUST00000171404 Spink4O35679 86 aa12.4□□□□□ -0.42
Gtf3c4-204ENSMUST00000171404 Dennd4cA6H8H2 1906 aa12.4□□□□□ -0.42
Gtf3c4-204ENSMUST00000171404 Pom121l2Q5SW25 972 aa12.4□□□□□ -0.43
Gtf3c4-204ENSMUST00000171404 Igkv8-18A0A0B4J1J3 123 aa12.39□□□□□ -0.43
Gtf3c4-204ENSMUST00000171404 Col8a2P25318 699 aa12.39□□□□□ -0.43
Gtf3c4-204ENSMUST00000171404 Ntf4Q80VU4 209 aa12.39□□□□□ -0.43
Gtf3c4-204ENSMUST00000171404 Ighv8-2A0A0A6YW58 119 aa12.39□□□□□ -0.43
Gtf3c4-204ENSMUST00000171404 Mbd6Q3TY92 1003 aa12.39□□□□□ -0.43
Gtf3c4-204ENSMUST00000171404 Zic4Q61467 341 aa12.39□□□□□ -0.43
Gtf3c4-204ENSMUST00000171404 Ighv1-19A0A0A6YWX0 117 aa12.39□□□□□ -0.43
Gtf3c4-204ENSMUST00000171404 Higd2aQ9CQJ1 106 aa12.39□□□□□ -0.43
Gtf3c4-204ENSMUST00000171404 Tmem243B2RVB9 118 aa12.39□□□□□ -0.43
Gtf3c4-204ENSMUST00000171404 BlcapP62951 87 aa12.38□□□□□ -0.43
Gtf3c4-204ENSMUST00000171404 Dmrtc1c1Q9D410 238 aa12.38□□□□□ -0.43
Gtf3c4-204ENSMUST00000171404 Them7Q9DCP4 223 aa12.38□□□□□ -0.43
Gtf3c4-204ENSMUST00000171404 Rspo1Q9Z132 265 aa12.38□□□□□ -0.43
Gtf3c4-204ENSMUST00000171404 Sh2d1aO88890 126 aa12.38□□□□□ -0.43
Gtf3c4-204ENSMUST00000171404 Spink8Q09TK9 105 aa12.38□□□□□ -0.43
Gtf3c4-204ENSMUST00000171404 Atp6v0e2Q91XE7 81 aa12.38□□□□□ -0.43
Gtf3c4-204ENSMUST00000171404 Tnfrsf23Q9ER63 176 aa12.38□□□□□ -0.43
Gtf3c4-204ENSMUST00000171404 B230359F08RikA0A0B4J1K3 109 aa12.38□□□□□ -0.43
Gtf3c4-204ENSMUST00000171404 P01643 108 aa12.38□□□□□ -0.43
Gtf3c4-204ENSMUST00000171404 Lyrm9Q3UN90 78 aa12.38□□□□□ -0.43
Gtf3c4-204ENSMUST00000171404 Hrct1Q9D6B9 109 aa12.38□□□□□ -0.43
Gtf3c4-204ENSMUST00000171404 Frem1Q684R7 2191 aa12.38□□□□□ -0.43
Gtf3c4-204ENSMUST00000171404 HelzQ6DFV5 1964 aaKnown RBP12.38□□□□□ -0.43
Gtf3c4-204ENSMUST00000171404 Trav13d-1A0A075B606 110 aa12.37□□□□□ -0.43
Gtf3c4-204ENSMUST00000171404 P01745 121 aa12.37□□□□□ -0.43
Gtf3c4-204ENSMUST00000171404 Sptbn1Q62261 2363 aaKnown RBP12.37□□□□□ -0.43
Gtf3c4-204ENSMUST00000171404 LoxP28301 411 aa12.37□□□□□ -0.43
Gtf3c4-204ENSMUST00000171404 Acyp1P56376 99 aa12.37□□□□□ -0.43
Gtf3c4-204ENSMUST00000171404 Trav13n-1A0A0G2JEU8 110 aa12.37□□□□□ -0.43
Gtf3c4-204ENSMUST00000171404 Trav6-6A0A075B603 114 aa12.37□□□□□ -0.43
Gtf3c4-204ENSMUST00000171404 Trav13-4-dv7A0A075B6C2 110 aa12.37□□□□□ -0.43
Gtf3c4-204ENSMUST00000171404 Znf672Q99LH4 468 aa12.37□□□□□ -0.43
Gtf3c4-204ENSMUST00000171404 Col24a1Q30D77 1733 aa12.36□□□□□ -0.43
Gtf3c4-204ENSMUST00000171404 Bdp1Q571C7 2467 aa12.36□□□□□ -0.43
Gtf3c4-204ENSMUST00000171404 CrygdP04342 174 aa12.36□□□□□ -0.43
Gtf3c4-204ENSMUST00000171404 Tm2d2Q8R0I4 213 aa12.36□□□□□ -0.43
Gtf3c4-204ENSMUST00000171404 Tnfrsf13bQ9ET35 249 aa12.36□□□□□ -0.43
Gtf3c4-204ENSMUST00000171404 Ahctf1Q8CJF7 2243 aaKnown RBP12.36□□□□□ -0.43
Gtf3c4-204ENSMUST00000171404 Gm5129F6YHA9 99 aa12.36□□□□□ -0.43
Gtf3c4-204ENSMUST00000171404 Klk12B2RVZ0 247 aa12.36□□□□□ -0.43
Gtf3c4-204ENSMUST00000171404 Slc25a29Q8BL03 306 aa12.36□□□□□ -0.43
Gtf3c4-204ENSMUST00000171404 LitafQ9JLJ0 161 aa12.36□□□□□ -0.43
Gtf3c4-204ENSMUST00000171404 Clec4b2Q67DU8 208 aa12.35□□□□□ -0.43
Gtf3c4-204ENSMUST00000171404 Ighv1-52A0A0A6YXC3 117 aa12.35□□□□□ -0.43
Gtf3c4-204ENSMUST00000171404 Gm17677B3GLJ5 116 aa12.35□□□□□ -0.43
Gtf3c4-204ENSMUST00000171404 TncQ80YX1 2110 aa12.35□□□□□ -0.43
Gtf3c4-204ENSMUST00000171404 Gm10518F6UQQ9 182 aa12.35□□□□□ -0.43
Gtf3c4-204ENSMUST00000171404 Reg3bP35230 175 aa12.35□□□□□ -0.43
Gtf3c4-204ENSMUST00000171404 UrahQ9CRB3 118 aa12.35□□□□□ -0.43
Gtf3c4-204ENSMUST00000171404 Ube2aQ9Z255 152 aa12.35□□□□□ -0.43
Gtf3c4-204ENSMUST00000171404 Trav13-2A0A075B649 110 aa12.35□□□□□ -0.43
Gtf3c4-204ENSMUST00000171404 P01750 117 aa12.35□□□□□ -0.43
Gtf3c4-204ENSMUST00000171404 Gm9949Q8C9F4 104 aa12.34□□□□□ -0.43
Gtf3c4-204ENSMUST00000171404 Brk1Q91VR8 75 aa12.34□□□□□ -0.43
Gtf3c4-204ENSMUST00000171404 P01837 106 aa12.34□□□□□ -0.43
Gtf3c4-204ENSMUST00000171404 Ifitm1Q9D103 106 aa12.34□□□□□ -0.43
Gtf3c4-204ENSMUST00000171404 Rpl39P62892 51 aa12.34□□□□□ -0.43
Gtf3c4-204ENSMUST00000171404 4930442H23RikQ9D5G7 103 aa12.34□□□□□ -0.43
Gtf3c4-204ENSMUST00000171404 Ighv1-77A0A0G2JGS9 117 aa12.34□□□□□ -0.43
Gtf3c4-204ENSMUST00000171404 Plscr4P58196 326 aa12.33□□□□□ -0.44
Gtf3c4-204ENSMUST00000171404 Ang4Q3TMQ6 144 aa12.33□□□□□ -0.44
Gtf3c4-204ENSMUST00000171404 Igkv2-109A0A075B5K6 120 aa12.33□□□□□ -0.44
Gtf3c4-204ENSMUST00000171404 Igkv3-10A0A0G2JGN0 119 aa12.33□□□□□ -0.44
Gtf3c4-204ENSMUST00000171404 Trav13-1A0A075B644 110 aa12.33□□□□□ -0.44
Gtf3c4-204ENSMUST00000171404 Trav13n-2A0A0G2JF93 110 aa12.33□□□□□ -0.44
Gtf3c4-204ENSMUST00000171404 Igkv1-35A0A0G2JDE5 120 aa12.33□□□□□ -0.44
Gtf3c4-204ENSMUST00000171404 Defb18Q30KP5 85 aa12.33□□□□□ -0.44
Gtf3c4-204ENSMUST00000171404 Mrpl52Q9D0Y8 121 aa12.32□□□□□ -0.44
Gtf3c4-204ENSMUST00000171404 Lst1O08843 95 aa12.32□□□□□ -0.44
Gtf3c4-204ENSMUST00000171404 P01756 117 aa12.32□□□□□ -0.44
Gtf3c4-204ENSMUST00000171404 P01757 117 aa12.32□□□□□ -0.44
Gtf3c4-204ENSMUST00000171404 Klk5Q9D140 293 aa12.32□□□□□ -0.44
Gtf3c4-204ENSMUST00000171404 Fstl3Q9EQC7 256 aa12.32□□□□□ -0.44
Gtf3c4-204ENSMUST00000171404 Ighv1-12A0A0A6YXJ9 117 aa12.31□□□□□ -0.44
Gtf3c4-204ENSMUST00000171404 Trav4n-4A0A075B615 110 aa12.31□□□□□ -0.44
Gtf3c4-204ENSMUST00000171404 Pglyrp1O88593 182 aa12.31□□□□□ -0.44
Gtf3c4-204ENSMUST00000171404 Zfp36l1P23950 338 aa12.31□□□□□ -0.44
Gtf3c4-204ENSMUST00000171404 Nxph4G3X9N5 304 aa12.31□□□□□ -0.44
Gtf3c4-204ENSMUST00000171404 Gm17577J3QNF7 156 aa12.31□□□□□ -0.44
Gtf3c4-204ENSMUST00000171404 Cox17P56394 63 aa12.31□□□□□ -0.44
Gtf3c4-204ENSMUST00000171404 Ighv3-1A0A075B5S6 116 aa12.3□□□□□ -0.44
Gtf3c4-204ENSMUST00000171404 Igkv3-4A0A140T8Q4 119 aa12.3□□□□□ -0.44
Gtf3c4-204ENSMUST00000171404 Q8C708 225 aa12.3□□□□□ -0.44
Gtf3c4-204ENSMUST00000171404 P01753 117 aa12.3□□□□□ -0.44
Gtf3c4-204ENSMUST00000171404 Rnf138Q9CQE0 245 aaKnown RBP12.3□□□□□ -0.44
Retrieved 100 of 22,080 RNA–protein pairs in 232.8 ms