Protein–RNA interactions for Protein: Q571C7

Bdp1, Transcription factor TFIIIB component B'' homolog, mousemouse

Predictions only

Length 2,467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Bdp1Q571C7 Gm25239-201ENSMUST00000174915 86 ntBASIC42.68■■■■■ 4.42
Bdp1Q571C7 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC39.7■■■■□ 3.95
Bdp1Q571C7 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC39.18■■■■□ 3.86
Bdp1Q571C7 Gm24109-201ENSMUST00000175489 103 ntBASIC37.56■■■■□ 3.6
Bdp1Q571C7 Gm15042-201ENSMUST00000120212 883 ntBASIC36.19■■■■□ 3.38
Bdp1Q571C7 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC36.03■■■■□ 3.36
Bdp1Q571C7 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC35.99■■■■□ 3.35
Bdp1Q571C7 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC35.87■■■■□ 3.33
Bdp1Q571C7 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC35.41■■■■□ 3.26
Bdp1Q571C7 Gm15045-201ENSMUST00000117359 883 ntBASIC35.33■■■■□ 3.25
Bdp1Q571C7 Gm23366-201ENSMUST00000175022 89 ntBASIC35.28■■■■□ 3.24
Bdp1Q571C7 AC153911.1-202ENSMUST00000218534 1034 ntBASIC35.2■■■■□ 3.23
Bdp1Q571C7 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC35.05■■■■□ 3.2
Bdp1Q571C7 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC34.99■■■■□ 3.19
Bdp1Q571C7 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC34.93■■■■□ 3.18
Bdp1Q571C7 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC34.9■■■■□ 3.18
Bdp1Q571C7 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC34.2■■■■□ 3.06
Bdp1Q571C7 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC34.1■■■■□ 3.05
Bdp1Q571C7 Gm25238-201ENSMUST00000174914 89 ntBASIC33.95■■■■□ 3.03
Bdp1Q571C7 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC33.87■■■■□ 3.01
Bdp1Q571C7 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC33.75■■■□□ 2.99
Bdp1Q571C7 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC33.5■■■□□ 2.95
Bdp1Q571C7 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC33.22■■■□□ 2.91
Bdp1Q571C7 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC33.16■■■□□ 2.9
Bdp1Q571C7 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC32.99■■■□□ 2.87
Bdp1Q571C7 Gm25262-201ENSMUST00000174934 133 ntBASIC32.94■■■□□ 2.86
Bdp1Q571C7 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC32.91■■■□□ 2.86
Bdp1Q571C7 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC32.75■■■□□ 2.83
Bdp1Q571C7 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC32.6■■■□□ 2.81
Bdp1Q571C7 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC32.55■■■□□ 2.8
Bdp1Q571C7 Gm26115-201ENSMUST00000175605 87 ntBASIC32.49■■■□□ 2.79
Bdp1Q571C7 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC32.39■■■□□ 2.78
Bdp1Q571C7 Gm8109-201ENSMUST00000194076 746 ntBASIC32.3■■■□□ 2.76
Bdp1Q571C7 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
Bdp1Q571C7 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC32.28■■■□□ 2.76
Bdp1Q571C7 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC32.18■■■□□ 2.74
Bdp1Q571C7 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC32.15■■■□□ 2.74
Bdp1Q571C7 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC32.14■■■□□ 2.73
Bdp1Q571C7 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
Bdp1Q571C7 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
Bdp1Q571C7 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC31.91■■■□□ 2.7
Bdp1Q571C7 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
Bdp1Q571C7 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
Bdp1Q571C7 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC31.76■■■□□ 2.67
Bdp1Q571C7 Gm27325-201ENSMUST00000175467 74 ntBASIC31.73■■■□□ 2.67
Bdp1Q571C7 Rab21-202ENSMUST00000218831 843 ntBASIC31.69■■■□□ 2.66
Bdp1Q571C7 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
Bdp1Q571C7 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
Bdp1Q571C7 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
Bdp1Q571C7 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC31.59■■■□□ 2.65
Bdp1Q571C7 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC31.53■■■□□ 2.64
Bdp1Q571C7 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC31.42■■■□□ 2.62
Bdp1Q571C7 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
Bdp1Q571C7 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC31.35■■■□□ 2.61
Bdp1Q571C7 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC31.31■■■□□ 2.6
Bdp1Q571C7 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC31.31■■■□□ 2.6
Bdp1Q571C7 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC31.25■■■□□ 2.59
Bdp1Q571C7 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC31.25■■■□□ 2.59
Bdp1Q571C7 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
Bdp1Q571C7 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
Bdp1Q571C7 Gm24804-201ENSMUST00000174982 85 ntBASIC31.08■■■□□ 2.57
Bdp1Q571C7 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
Bdp1Q571C7 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
Bdp1Q571C7 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
Bdp1Q571C7 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
Bdp1Q571C7 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC30.95■■■□□ 2.54
Bdp1Q571C7 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
Bdp1Q571C7 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
Bdp1Q571C7 Gm17082-201ENSMUST00000166043 1091 ntBASIC30.84■■■□□ 2.53
Bdp1Q571C7 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC30.78■■■□□ 2.52
Bdp1Q571C7 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC30.73■■■□□ 2.51
Bdp1Q571C7 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC30.72■■■□□ 2.51
Bdp1Q571C7 Zfp131-205ENSMUST00000223812 663 ntBASIC30.7■■■□□ 2.51
Bdp1Q571C7 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC30.68■■■□□ 2.5
Bdp1Q571C7 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
Bdp1Q571C7 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC30.61■■■□□ 2.49
Bdp1Q571C7 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
Bdp1Q571C7 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC30.57■■■□□ 2.48
Bdp1Q571C7 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC30.51■■■□□ 2.47
Bdp1Q571C7 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC30.5■■■□□ 2.47
Bdp1Q571C7 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC30.48■■■□□ 2.47
Bdp1Q571C7 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
Bdp1Q571C7 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC30.47■■■□□ 2.47
Bdp1Q571C7 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
Bdp1Q571C7 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
Bdp1Q571C7 Gm27322-201ENSMUST00000184007 104 ntBASIC30.35■■■□□ 2.45
Bdp1Q571C7 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
Bdp1Q571C7 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC30.35■■■□□ 2.45
Bdp1Q571C7 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC30.31■■■□□ 2.44
Bdp1Q571C7 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
Bdp1Q571C7 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC30.27■■■□□ 2.44
Bdp1Q571C7 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC30.23■■■□□ 2.43
Bdp1Q571C7 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
Bdp1Q571C7 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC30.17■■■□□ 2.42
Bdp1Q571C7 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
Bdp1Q571C7 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC30.14■■■□□ 2.42
Bdp1Q571C7 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
Bdp1Q571C7 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC30.06■■■□□ 2.4
Bdp1Q571C7 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
Bdp1Q571C7 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC30.04■■■□□ 2.4
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms