RNA–Protein interactions for RNA: YOR261C

RPN8, Transcript of Essential non-ATPase regulatory subunit of the 26S proteasome, yeast

Gene RPN8, Length 1,017 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN8	YOR261C	APD1	P38281	316 aa		4.98	□□□□□ -1.61
RPN8	YOR261C	MTG2	P38860	518 aa		4.98	□□□□□ -1.61
RPN8	YOR261C	CRF1	Q04930	467 aa		4.98	□□□□□ -1.61
RPN8	YOR261C	YDL242W	Q07746	117 aa		4.98	□□□□□ -1.61
RPN8	YOR261C	ICL2	Q12031	575 aa		4.98	□□□□□ -1.61
RPN8	YOR261C	RRP6	Q12149	733 aa	Known RBP	4.98	□□□□□ -1.61
RPN8	YOR261C	LCB4	Q12246	624 aa		4.98	□□□□□ -1.61
RPN8	YOR261C	RRP43	P25359	394 aa	Predicted RBP	4.97	□□□□□ -1.61
RPN8	YOR261C	EIS1	Q05050	843 aa	Known RBP	4.97	□□□□□ -1.61
RPN8	YOR261C	SPN1	Q06505	410 aa	Predicted RBP	4.97	□□□□□ -1.61
RPN8	YOR261C	BSP1	Q06604	576 aa		4.97	□□□□□ -1.61
RPN8	YOR261C	YOL057W	Q08225	711 aa		4.97	□□□□□ -1.61
RPN8	YOR261C	MCM3	P24279	971 aa	Known RBP	4.96	□□□□□ -1.62
RPN8	YOR261C	APM3	P38153	483 aa		4.96	□□□□□ -1.62
RPN8	YOR261C	YHL041W	P38730	149 aa		4.96	□□□□□ -1.62
RPN8	YOR261C	BNA3	P47039	444 aa	Known RBP	4.96	□□□□□ -1.62
RPN8	YOR261C	COG2	P53271	262 aa		4.96	□□□□□ -1.62
RPN8	YOR261C	ATP23	P53722	227 aa		4.96	□□□□□ -1.62
RPN8	YOR261C	ESF2	P53743	316 aa	Known RBP	4.96	□□□□□ -1.62
RPN8	YOR261C	CYK3	Q07533	885 aa		4.96	□□□□□ -1.62
RPN8	YOR261C	YER175W-A	Q8TGU4	54 aa		4.96	□□□□□ -1.62
RPN8	YOR261C	PIF1	P07271	859 aa		4.95	□□□□□ -1.62
RPN8	YOR261C	MAK32	P23060	363 aa		4.95	□□□□□ -1.62
RPN8	YOR261C	LNP1	P38878	278 aa		4.95	□□□□□ -1.62
RPN8	YOR261C	SPC72	P39723	622 aa		4.95	□□□□□ -1.62
RPN8	YOR261C	NMD5	P46970	1048 aa		4.95	□□□□□ -1.62
RPN8	YOR261C	HIM1	Q06674	414 aa		4.95	□□□□□ -1.62
RPN8	YOR261C	IWR1	Q07532	353 aa	Predicted RBP	4.95	□□□□□ -1.62
RPN8	YOR261C	NYV1	Q12255	253 aa		4.95	□□□□□ -1.62
RPN8	YOR261C	YLR111W	Q12528	110 aa		4.95	□□□□□ -1.62
RPN8	YOR261C	POL3	P15436	1097 aa		4.94	□□□□□ -1.62
RPN8	YOR261C	MSH1	P25846	959 aa		4.94	□□□□□ -1.62
RPN8	YOR261C	BEM3	P32873	1128 aa		4.94	□□□□□ -1.62
RPN8	YOR261C	KES1	P35844	434 aa	Known RBP	4.94	□□□□□ -1.62
RPN8	YOR261C	SAP1	P39955	897 aa	Known RBP	4.94	□□□□□ -1.62
RPN8	YOR261C	LTP1	P40347	161 aa		4.94	□□□□□ -1.62
RPN8	YOR261C	TAN1	P53072	289 aa	Predicted RBP	4.94	□□□□□ -1.62
RPN8	YOR261C	YML053C	Q04978	212 aa		4.94	□□□□□ -1.62
RPN8	YOR261C	IRC3	Q06683	689 aa		4.94	□□□□□ -1.62
RPN8	YOR261C	YBR255C-A	Q3E776	120 aa		4.94	□□□□□ -1.62
RPN8	YOR261C	XBP1	P40489	647 aa		4.93	□□□□□ -1.62
RPN8	YOR261C	CAB2	P40506	365 aa		4.93	□□□□□ -1.62
RPN8	YOR261C	NOP2	P40991	618 aa	Known RBP	4.93	□□□□□ -1.62
RPN8	YOR261C	BPL1	P48445	690 aa	Predicted RBP	4.93	□□□□□ -1.62
RPN8	YOR261C	CPR6	P53691	371 aa	Known RBP	4.93	□□□□□ -1.62
RPN8	YOR261C	PLM2	Q04383	521 aa		4.93	□□□□□ -1.62
RPN8	YOR261C	ORM2	Q06144	216 aa		4.93	□□□□□ -1.62
RPN8	YOR261C	PNO1	Q99216	274 aa	Known RBP	4.93	□□□□□ -1.62
RPN8	YOR261C	ADE3	P07245	946 aa	Known RBP	4.92	□□□□□ -1.62
RPN8	YOR261C	BIK1	P11709	440 aa		4.92	□□□□□ -1.62
RPN8	YOR261C	SEC18	P18759	758 aa	Known RBP	4.92	□□□□□ -1.62
RPN8	YOR261C	SWI4	P25302	1093 aa	Known RBP	4.92	□□□□□ -1.62
RPN8	YOR261C	IMD2	P38697	523 aa	Known RBP	4.92	□□□□□ -1.62
RPN8	YOR261C	CIR1	P42940	261 aa		4.92	□□□□□ -1.62
RPN8	YOR261C	IMD3	P50095	523 aa	Known RBP	4.92	□□□□□ -1.62
RPN8	YOR261C	YNL058C	P53947	316 aa		4.92	□□□□□ -1.62
RPN8	YOR261C	IOC4	Q04213	475 aa		4.92	□□□□□ -1.62
RPN8	YOR261C	RAD34	Q06665	692 aa		4.92	□□□□□ -1.62
RPN8	YOR261C	RTC1	Q08281	1341 aa		4.92	□□□□□ -1.62
RPN8	YOR261C	SES1	P07284	462 aa	Known RBP	4.91	□□□□□ -1.62
RPN8	YOR261C	YEF3	P16521	1044 aa	Known RBP	4.91	□□□□□ -1.62
RPN8	YOR261C	RIT1	P23796	513 aa		4.91	□□□□□ -1.62
RPN8	YOR261C	VBA2	P38358	474 aa	Known RBP	4.91	□□□□□ -1.62
RPN8	YOR261C	ULP2	P40537	1034 aa	Predicted RBP	4.91	□□□□□ -1.62
RPN8	YOR261C	YPL108W	Q02872	168 aa	Predicted RBP	4.91	□□□□□ -1.62
RPN8	YOR261C	RSC9	Q03124	581 aa		4.91	□□□□□ -1.62
RPN8	YOR261C	SUL2	Q12325	893 aa		4.91	□□□□□ -1.62
RPN8	YOR261C	CET1	O13297	549 aa	Predicted RBP	4.9	□□□□□ -1.63
RPN8	YOR261C	BI2	P03873	423 aa		4.9	□□□□□ -1.63
RPN8	YOR261C	PDE1	P22434	369 aa		4.9	□□□□□ -1.63
RPN8	YOR261C	PTP1	P25044	335 aa		4.9	□□□□□ -1.63
RPN8	YOR261C	RPF2	P36160	344 aa	Known RBP	4.9	□□□□□ -1.63
RPN8	YOR261C	RPT2	P40327	437 aa	Known RBP	4.9	□□□□□ -1.63
RPN8	YOR261C	VPS27	P40343	622 aa	Known RBP	4.9	□□□□□ -1.63
RPN8	YOR261C	IMA1	P53051	589 aa		4.9	□□□□□ -1.63
RPN8	YOR261C	ATG21	Q02887	496 aa		4.9	□□□□□ -1.63
RPN8	YOR261C	YPL191C	Q08930	360 aa		4.9	□□□□□ -1.63
RPN8	YOR261C	PRS5	Q12265	496 aa	Known RBP	4.9	□□□□□ -1.63
RPN8	YOR261C	MIS1	P09440	975 aa	Known RBP	4.89	□□□□□ -1.63
RPN8	YOR261C	ARP2	P32381	391 aa	Known RBP	4.89	□□□□□ -1.63
RPN8	YOR261C	ERC1	P38767	581 aa		4.89	□□□□□ -1.63
RPN8	YOR261C	ACA1	P39970	489 aa		4.89	□□□□□ -1.63
RPN8	YOR261C	NET1	P47035	1189 aa		4.89	□□□□□ -1.63
RPN8	YOR261C	PAP2	P53632	584 aa	Known RBP	4.89	□□□□□ -1.63
RPN8	YOR261C	IDP3	P53982	420 aa	Known RBP	4.89	□□□□□ -1.63
RPN8	YOR261C	YAT1	P80235	687 aa		4.89	□□□□□ -1.63
RPN8	YOR261C	ARA2	Q04212	335 aa		4.89	□□□□□ -1.63
RPN8	YOR261C	TPO3	Q06451	622 aa		4.89	□□□□□ -1.63
RPN8	YOR261C	LYS21	Q12122	440 aa	Known RBP	4.89	□□□□□ -1.63
RPN8	YOR261C	URE2	P23202	354 aa	Known RBP	4.88	□□□□□ -1.63
RPN8	YOR261C	URK1	P27515	501 aa		4.88	□□□□□ -1.63
RPN8	YOR261C	YBR138C	P38277	524 aa		4.88	□□□□□ -1.63
RPN8	YOR261C	FTH1	P38310	465 aa		4.88	□□□□□ -1.63
RPN8	YOR261C	BUD16	P39988	312 aa		4.88	□□□□□ -1.63
RPN8	YOR261C	PUG1	P40100	303 aa		4.88	□□□□□ -1.63
RPN8	YOR261C	CIN1	P40987	1014 aa		4.88	□□□□□ -1.63
RPN8	YOR261C	SNO3	P43544	222 aa		4.88	□□□□□ -1.63
RPN8	YOR261C	YJR008W	P47085	338 aa		4.88	□□□□□ -1.63
RPN8	YOR261C	NPA3	P47122	385 aa		4.88	□□□□□ -1.63
RPN8	YOR261C	UBX4	P54730	416 aa		4.88	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 20 ms