RNA–Protein interactions for RNA: YLR411W

CTR3, Transcript of High-affinity copper transporter of the plasma membrane, yeastyeast

Gene CTR3, Length 726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTR3YLR411W NTH1P32356 751 aa5.79□□□□□ -1.48
CTR3YLR411W YHR097CP38809 366 aaKnown RBP5.79□□□□□ -1.48
CTR3YLR411W ENP2P48234 707 aaKnown RBP5.79□□□□□ -1.48
CTR3YLR411W VPS73P53142 486 aaKnown RBP5.79□□□□□ -1.48
CTR3YLR411W COG6P53959 839 aa5.79□□□□□ -1.48
CTR3YLR411W ALE1Q08548 619 aa5.79□□□□□ -1.48
CTR3YLR411W FKS3Q04952 1785 aa5.79□□□□□ -1.48
CTR3YLR411W SAC3P46674 1301 aa5.78□□□□□ -1.48
CTR3YLR411W DMC1P25453 334 aa5.78□□□□□ -1.48
CTR3YLR411W HXT4P32467 576 aa5.78□□□□□ -1.48
CTR3YLR411W RRP1P35178 278 aaPredicted RBP5.78□□□□□ -1.48
CTR3YLR411W CDS1P38221 457 aa5.78□□□□□ -1.48
CTR3YLR411W ARP5P53946 755 aa5.78□□□□□ -1.48
CTR3YLR411W ZDS2P54786 942 aa5.78□□□□□ -1.48
CTR3YLR411W YSH1Q06224 779 aaPredicted RBP5.78□□□□□ -1.48
CTR3YLR411W IZH3Q07959 543 aa5.78□□□□□ -1.48
CTR3YLR411W SES1P07284 462 aaKnown RBP5.77□□□□□ -1.49
CTR3YLR411W GPA1P08539 472 aa5.77□□□□□ -1.49
CTR3YLR411W CBP3P21560 335 aa5.77□□□□□ -1.49
CTR3YLR411W PEP3P27801 918 aa5.77□□□□□ -1.49
CTR3YLR411W DGR2P32330 852 aa5.77□□□□□ -1.49
CTR3YLR411W MTC7P32633 139 aa5.77□□□□□ -1.49
CTR3YLR411W KTR3P38130 404 aaPredicted RBP5.77□□□□□ -1.49
CTR3YLR411W TDP1P38319 544 aa5.77□□□□□ -1.49
CTR3YLR411W KSP1P38691 1029 aaKnown RBP5.77□□□□□ -1.49
CTR3YLR411W CRG1P38892 291 aaRIP-Chip data5.77□□□□□ -1.49not detected
CTR3YLR411W PRM2P40534 656 aa5.77□□□□□ -1.49
CTR3YLR411W FDC1Q03034 503 aa5.77□□□□□ -1.49
CTR3YLR411W NGL1Q08213 363 aaKnown RBP5.77□□□□□ -1.49
CTR3YLR411W SUT2Q12286 268 aa5.77□□□□□ -1.49
CTR3YLR411W URB1P34241 1764 aaKnown RBP5.77□□□□□ -1.49
CTR3YLR411W YIL177CP40434 1758 aa5.77□□□□□ -1.49
CTR3YLR411W YJL225CP40889 1758 aa5.77□□□□□ -1.49
CTR3YLR411W PIF1P07271 859 aa5.76□□□□□ -1.49
CTR3YLR411W GFA1P14742 717 aaKnown RBP5.76□□□□□ -1.49
CTR3YLR411W GSY2P27472 705 aa5.76□□□□□ -1.49
CTR3YLR411W HEM12P32347 362 aaPredicted RBP5.76□□□□□ -1.49
CTR3YLR411W SKI2P35207 1287 aaKnown RBP RIP-Chip data5.76□□□□□ -1.49not detected
CTR3YLR411W GMH1P36125 273 aa5.76□□□□□ -1.49
CTR3YLR411W YHR033WP38690 423 aa5.76□□□□□ -1.49
CTR3YLR411W RIX1P38883 763 aaPredicted RBP5.76□□□□□ -1.49
CTR3YLR411W YER130CP39959 443 aa5.76□□□□□ -1.49
CTR3YLR411W FTR1P40088 404 aa5.76□□□□□ -1.49
CTR3YLR411W TAH11P47112 604 aa5.76□□□□□ -1.49
CTR3YLR411W FOL1P53848 824 aa5.76□□□□□ -1.49
CTR3YLR411W HLR1Q04429 423 aa5.76□□□□□ -1.49
CTR3YLR411W COG4Q06096 861 aa5.76□□□□□ -1.49
CTR3YLR411W YCG1Q06680 1035 aa5.76□□□□□ -1.49
CTR3YLR411W TAD3Q9URQ3 322 aa5.76□□□□□ -1.49
CTR3YLR411W TUP1P16649 713 aa5.75□□□□□ -1.49
CTR3YLR411W COX11P19516 300 aaKnown RBP5.75□□□□□ -1.49
CTR3YLR411W YEL043WP32618 956 aa5.75□□□□□ -1.49
CTR3YLR411W TMN3P40071 706 aa5.75□□□□□ -1.49
CTR3YLR411W SPC105P53148 917 aa5.75□□□□□ -1.49
CTR3YLR411W NMA2P53204 395 aa5.75□□□□□ -1.49
CTR3YLR411W MAL13P53338 473 aa5.75□□□□□ -1.49
CTR3YLR411W ALF1P53904 254 aa5.75□□□□□ -1.49
CTR3YLR411W ADE16P54113 591 aaKnown RBP5.75□□□□□ -1.49
CTR3YLR411W RKI1Q12189 258 aa5.75□□□□□ -1.49
CTR3YLR411W DUR1,2P32528 1835 aaKnown RBP5.75□□□□□ -1.49
CTR3YLR411W HCA4P20448 770 aaKnown RBP5.74□□□□□ -1.49
CTR3YLR411W SRP68P38687 599 aaKnown RBP5.74□□□□□ -1.49
CTR3YLR411W SLD3P53135 668 aa5.74□□□□□ -1.49
CTR3YLR411W SNF12P53628 566 aa5.74□□□□□ -1.49
CTR3YLR411W PLC1P32383 869 aa5.73□□□□□ -1.49
CTR3YLR411W EMP70P32802 667 aa5.73□□□□□ -1.49
CTR3YLR411W TFC4P33339 1025 aa5.73□□□□□ -1.49
CTR3YLR411W ELF1P36053 145 aa5.73□□□□□ -1.49
CTR3YLR411W APL3P38065 1025 aa5.73□□□□□ -1.49
CTR3YLR411W IRC5P43610 853 aa5.73□□□□□ -1.49
CTR3YLR411W CUE3P53137 624 aaKnown RBP5.73□□□□□ -1.49
CTR3YLR411W PIB2P53191 635 aa5.73□□□□□ -1.49
CTR3YLR411W DIP5P53388 608 aa5.73□□□□□ -1.49
CTR3YLR411W VPS75P53853 264 aa5.73□□□□□ -1.49
CTR3YLR411W MRS2Q01926 470 aa5.73□□□□□ -1.49
CTR3YLR411W WAR1Q03631 944 aa5.73□□□□□ -1.49
CTR3YLR411W VPS64Q03944 604 aa5.73□□□□□ -1.49
CTR3YLR411W SNU66Q12420 587 aaPredicted RBP5.73□□□□□ -1.49
CTR3YLR411W HMG2P12684 1045 aa5.72□□□□□ -1.49
CTR3YLR411W PHO13P19881 312 aa5.72□□□□□ -1.49
CTR3YLR411W MCM3P24279 971 aaKnown RBP5.72□□□□□ -1.49
CTR3YLR411W MSH1P25846 959 aa5.72□□□□□ -1.49
CTR3YLR411W DPB3P27344 201 aa5.72□□□□□ -1.49
CTR3YLR411W MFT1P33441 392 aaKnown RBP5.72□□□□□ -1.49
CTR3YLR411W EMP65P40085 556 aa5.72□□□□□ -1.49
CTR3YLR411W PEA2P40091 420 aa5.72□□□□□ -1.49
CTR3YLR411W YDL183CP48569 320 aa5.72□□□□□ -1.49
CTR3YLR411W SPN1Q06505 410 aaPredicted RBP5.72□□□□□ -1.49
CTR3YLR411W TAH18Q12181 623 aa5.72□□□□□ -1.49
CTR3YLR411W SSK22P25390 1331 aaPredicted RBP5.72□□□□□ -1.49
CTR3YLR411W LAM4P38800 1345 aa5.72□□□□□ -1.49
CTR3YLR411W YEL076C-AP0CX16 216 aa5.71□□□□□ -1.5
CTR3YLR411W YLR464WP0CX17 216 aa5.71□□□□□ -1.5
CTR3YLR411W SEC18P18759 758 aaKnown RBP5.71□□□□□ -1.5
CTR3YLR411W DEP1P31385 405 aa5.71□□□□□ -1.5
CTR3YLR411W BMH2P34730 273 aaKnown RBP5.71□□□□□ -1.5
CTR3YLR411W PXL1P36166 706 aa5.71□□□□□ -1.5
CTR3YLR411W YEL076CP39971 216 aa5.71□□□□□ -1.5
CTR3YLR411W RAD26P40352 1085 aa5.71□□□□□ -1.5
CTR3YLR411W YIL166CP40445 542 aa5.71□□□□□ -1.5
Retrieved 100 of 5,963 RNA–protein pairs in 14.4 ms