RNA–Protein interactions for RNA: YKR101W

SIR1, Transcript of Protein involved in silencing at mating-type loci HML and HMR, yeast

Gene SIR1, Length 1,965 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SIR1	YKR101W	HOM3	P10869	527 aa		5.07	□□□□□ -1.6
SIR1	YKR101W	PHO11	P35842	467 aa		5.07	□□□□□ -1.6
SIR1	YKR101W	PHO12	P38693	467 aa		5.07	□□□□□ -1.6
SIR1	YKR101W	DUO1	P53168	247 aa	Known RBP	5.07	□□□□□ -1.6
SIR1	YKR101W	ENT4	Q07872	247 aa		5.07	□□□□□ -1.6
SIR1	YKR101W	CIR2	Q08822	631 aa		5.07	□□□□□ -1.6
SIR1	YKR101W	PGA3	Q12746	312 aa	Known RBP	5.07	□□□□□ -1.6
SIR1	YKR101W	PNO1	Q99216	274 aa	Known RBP	5.07	□□□□□ -1.6
SIR1	YKR101W	YLR302C	O13544	120 aa		5.06	□□□□□ -1.6
SIR1	YKR101W	ATP2	P00830	511 aa	Known RBP	5.06	□□□□□ -1.6
SIR1	YKR101W	SPO16	P17122	198 aa		5.06	□□□□□ -1.6
SIR1	YKR101W	IST3	P40565	148 aa	Predicted RBP	5.06	□□□□□ -1.6
SIR1	YKR101W	YJL163C	P46996	555 aa		5.06	□□□□□ -1.6
SIR1	YKR101W	FHN1	P53279	174 aa		5.06	□□□□□ -1.6
SIR1	YKR101W	SPC19	Q03954	165 aa		5.06	□□□□□ -1.6
SIR1	YKR101W	UTP21	Q06078	939 aa	Predicted RBP	5.06	□□□□□ -1.6
SIR1	YKR101W	SCM3	Q12334	223 aa		5.06	□□□□□ -1.6
SIR1	YKR101W	SIR3	P06701	978 aa		5.05	□□□□□ -1.6
SIR1	YKR101W	ERG8	P24521	451 aa		5.05	□□□□□ -1.6
SIR1	YKR101W	YHR097C	P38809	366 aa	Known RBP	5.05	□□□□□ -1.6
SIR1	YKR101W	IDS2	P46958	469 aa		5.05	□□□□□ -1.6
SIR1	YKR101W	ECL1	P48235	211 aa		5.05	□□□□□ -1.6
SIR1	YKR101W	RSC1	P53236	928 aa		5.05	□□□□□ -1.6
SIR1	YKR101W	YNR061C	P53747	219 aa		5.05	□□□□□ -1.6
SIR1	YKR101W	EFR3	Q03653	782 aa	Known RBP	5.05	□□□□□ -1.6
SIR1	YKR101W	CRF1	Q04930	467 aa		5.05	□□□□□ -1.6
SIR1	YKR101W	YLR287C	Q05881	355 aa		5.05	□□□□□ -1.6
SIR1	YKR101W	TMA16	Q08687	178 aa		5.05	□□□□□ -1.6
SIR1	YKR101W	SKM1	Q12469	655 aa		5.05	□□□□□ -1.6
SIR1	YKR101W	YKL033W-A	Q86ZR7	236 aa		5.05	□□□□□ -1.6
SIR1	YKR101W	MET3	P08536	511 aa		5.05	□□□□□ -1.6
SIR1	YKR101W	THR1	P17423	357 aa	Known RBP	5.05	□□□□□ -1.6
SIR1	YKR101W	YCR061W	P25639	631 aa		5.05	□□□□□ -1.6
SIR1	YKR101W	ELF1	P36053	145 aa		5.05	□□□□□ -1.6
SIR1	YKR101W	OMA1	P36163	345 aa		5.05	□□□□□ -1.6
SIR1	YKR101W	BUD16	P39988	312 aa		5.05	□□□□□ -1.6
SIR1	YKR101W	YGR250C	P53316	781 aa	Known RBP	5.05	□□□□□ -1.6
SIR1	YKR101W	YPL108W	Q02872	168 aa	Predicted RBP	5.05	□□□□□ -1.6
SIR1	YKR101W	NGL3	Q03210	505 aa		5.05	□□□□□ -1.6
SIR1	YKR101W	RRG1	Q12167	365 aa	Predicted RBP	5.05	□□□□□ -1.6
SIR1	YKR101W	VCX1	Q99385	411 aa		5.05	□□□□□ -1.6
SIR1	YKR101W	PGS1	P25578	521 aa		5.04	□□□□□ -1.6
SIR1	YKR101W	URK1	P27515	501 aa		5.04	□□□□□ -1.6
SIR1	YKR101W	SAC6	P32599	642 aa	Known RBP	5.04	□□□□□ -1.6
SIR1	YKR101W	CTP1	P38152	299 aa		5.04	□□□□□ -1.6
SIR1	YKR101W	RCO1	Q04779	684 aa		5.04	□□□□□ -1.6
SIR1	YKR101W	XRN1	P22147	1528 aa	Known RBP	5.04	□□□□□ -1.6
SIR1	YKR101W	VPS34	P22543	875 aa		5.04	□□□□□ -1.6
SIR1	YKR101W	HIS7	P33734	552 aa	Known RBP	5.04	□□□□□ -1.6
SIR1	YKR101W	TOD6	P34219	525 aa		5.04	□□□□□ -1.6
SIR1	YKR101W	ARC1	P46672	376 aa	Known RBP	5.04	□□□□□ -1.6
SIR1	YKR101W	SNF12	P53628	566 aa		5.04	□□□□□ -1.6
SIR1	YKR101W	SSL2	Q00578	843 aa		5.04	□□□□□ -1.6
SIR1	YKR101W	USA1	Q03714	838 aa		5.04	□□□□□ -1.6
SIR1	YKR101W	RAD30	Q04049	632 aa		5.04	□□□□□ -1.6
SIR1	YKR101W	SPN1	Q06505	410 aa	Predicted RBP	5.04	□□□□□ -1.6
SIR1	YKR101W	GAS1	P22146	559 aa	Known RBP	5.03	□□□□□ -1.6
SIR1	YKR101W	YCK1	P23291	538 aa		5.03	□□□□□ -1.6
SIR1	YKR101W	MRX6	P48564	524 aa		5.03	□□□□□ -1.6
SIR1	YKR101W	MCM6	P53091	1017 aa	Known RBP	5.03	□□□□□ -1.6
SIR1	YKR101W	RIM8	P53179	542 aa		5.03	□□□□□ -1.6
SIR1	YKR101W	YPL071C	Q02864	156 aa		5.03	□□□□□ -1.6
SIR1	YKR101W	SYF1	Q04048	859 aa	Predicted RBP	5.03	□□□□□ -1.6
SIR1	YKR101W	PSK2	Q08217	1101 aa		5.03	□□□□□ -1.6
SIR1	YKR101W	FRE5	Q08908	694 aa		5.03	□□□□□ -1.6
SIR1	YKR101W	YOR111W	Q99210	232 aa		5.03	□□□□□ -1.6
SIR1	YKR101W	BUD4	P47136	1447 aa		5.03	□□□□□ -1.6
SIR1	YKR101W	MET17	P06106	444 aa		5.02	□□□□□ -1.61
SIR1	YKR101W	CDC24	P11433	854 aa	Predicted RBP	5.02	□□□□□ -1.61
SIR1	YKR101W	KAR3	P17119	729 aa		5.02	□□□□□ -1.61
SIR1	YKR101W	FUB1	P25659	250 aa		5.02	□□□□□ -1.61
SIR1	YKR101W	NTH1	P32356	751 aa		5.02	□□□□□ -1.61
SIR1	YKR101W	ARO9	P38840	513 aa	Predicted RBP	5.02	□□□□□ -1.61
SIR1	YKR101W	VPS4	P52917	437 aa		5.02	□□□□□ -1.61
SIR1	YKR101W	DSD1	P53095	428 aa		5.02	□□□□□ -1.61
SIR1	YKR101W	VPS75	P53853	264 aa		5.02	□□□□□ -1.61
SIR1	YKR101W	RPS15	Q01855	142 aa	Known RBP	5.02	□□□□□ -1.61
SIR1	YKR101W	PRS5	Q12265	496 aa	Known RBP	5.02	□□□□□ -1.61
SIR1	YKR101W	ARG3	P05150	338 aa		5.02	□□□□□ -1.61
SIR1	YKR101W	FUR1	P18562	216 aa	Known RBP	5.02	□□□□□ -1.61
SIR1	YKR101W	STE11	P23561	717 aa		5.02	□□□□□ -1.61
SIR1	YKR101W	CAP1	P28495	268 aa	Known RBP	5.02	□□□□□ -1.61
SIR1	YKR101W	ALY1	P36117	915 aa		5.02	□□□□□ -1.61
SIR1	YKR101W	REV7	P38927	245 aa		5.02	□□□□□ -1.61
SIR1	YKR101W	FMP52	P40008	231 aa		5.02	□□□□□ -1.61
SIR1	YKR101W	INN1	P53901	409 aa		5.02	□□□□□ -1.61
SIR1	YKR101W	USV1	Q12132	391 aa		5.02	□□□□□ -1.61
SIR1	YKR101W	YBR126W-A	Q8TGU7	68 aa		5.02	□□□□□ -1.61
SIR1	YKR101W	ERG3	P32353	365 aa		5.01	□□□□□ -1.61
SIR1	YKR101W	NOP4	P37838	685 aa	Known RBP	5.01	□□□□□ -1.61
SIR1	YKR101W	SDH8	P38345	138 aa		5.01	□□□□□ -1.61
SIR1	YKR101W	GPD2	P41911	440 aa	Known RBP	5.01	□□□□□ -1.61
SIR1	YKR101W	IMO32	P53219	342 aa		5.01	□□□□□ -1.61
SIR1	YKR101W	PIL1	P53252	339 aa	Known RBP	5.01	□□□□□ -1.61
SIR1	YKR101W	CLU1	Q03690	1277 aa	Known RBP	5.01	□□□□□ -1.61
SIR1	YKR101W	GRC3	Q07845	632 aa		5.01	□□□□□ -1.61
SIR1	YKR101W	NBP2	Q12163	236 aa		5.01	□□□□□ -1.61
SIR1	YKR101W	CET1	O13297	549 aa	Predicted RBP	5	□□□□□ -1.61
SIR1	YKR101W	CKA1	P15790	372 aa		5	□□□□□ -1.61
SIR1	YKR101W	PRP6	P19735	899 aa	Predicted RBP	5	□□□□□ -1.61

Retrieved 100 of 5,963 RNA–protein pairs in 189.6 ms