RNA–Protein interactions for RNA: YER116C

SLX8, Transcript of Subunit of Slx5-Slx8 SUMO-targeted ubiquitin ligase (STUbL) complex, yeast

Gene SLX8, Length 825 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SLX8	YER116C	MAD2	P40958	196 aa		4.26	□□□□□ -1.73
SLX8	YER116C	ARC1	P46672	376 aa	Known RBP	4.26	□□□□□ -1.73
SLX8	YER116C	GYP7	P48365	746 aa		4.26	□□□□□ -1.73
SLX8	YER116C	TEL2	P53038	688 aa		4.26	□□□□□ -1.73
SLX8	YER116C	YGR130C	P53278	816 aa		4.26	□□□□□ -1.73
SLX8	YER116C	BIO5	P53744	561 aa	Known RBP	4.26	□□□□□ -1.73
SLX8	YER116C	HAS1	Q03532	505 aa	Known RBP	4.26	□□□□□ -1.73
SLX8	YER116C	YAP6	Q03935	383 aa		4.26	□□□□□ -1.73
SLX8	YER116C	RAD30	Q04049	632 aa		4.26	□□□□□ -1.73
SLX8	YER116C	ECM22	Q05958	814 aa	Predicted RBP	4.26	□□□□□ -1.73
SLX8	YER116C	YLR407W	Q06070	228 aa		4.26	□□□□□ -1.73
SLX8	YER116C	YPR196W	Q06595	470 aa		4.26	□□□□□ -1.73
SLX8	YER116C	YPL260W	Q08977	551 aa		4.26	□□□□□ -1.73
SLX8	YER116C	ACM1	Q08981	209 aa		4.26	□□□□□ -1.73
SLX8	YER116C	NBP2	Q12163	236 aa		4.26	□□□□□ -1.73
SLX8	YER116C	RUD3	Q12234	484 aa	Known RBP	4.26	□□□□□ -1.73
SLX8	YER116C	PFK27	Q12471	397 aa	Predicted RBP	4.26	□□□□□ -1.73
SLX8	YER116C	TUB2	P02557	457 aa	Known RBP	4.25	□□□□□ -1.73
SLX8	YER116C	PCK1	P10963	549 aa		4.25	□□□□□ -1.73
SLX8	YER116C	PUT4	P15380	627 aa		4.25	□□□□□ -1.73
SLX8	YER116C	EST1	P17214	699 aa	Predicted RBP	4.25	□□□□□ -1.73
SLX8	YER116C	DBP3	P20447	523 aa	Known RBP	4.25	□□□□□ -1.73
SLX8	YER116C	PHO84	P25297	587 aa	Known RBP	4.25	□□□□□ -1.73
SLX8	YER116C	RRP43	P25359	394 aa	Predicted RBP	4.25	□□□□□ -1.73
SLX8	YER116C	DMC1	P25453	334 aa		4.25	□□□□□ -1.73
SLX8	YER116C	ERV1	P27882	189 aa		4.25	□□□□□ -1.73
SLX8	YER116C	URA7	P28274	579 aa	Known RBP	4.25	□□□□□ -1.73
SLX8	YER116C	CAP1	P28495	268 aa	Known RBP	4.25	□□□□□ -1.73
SLX8	YER116C	ARP2	P32381	391 aa	Known RBP	4.25	□□□□□ -1.73
SLX8	YER116C	MRP20	P32387	263 aa		4.25	□□□□□ -1.73
SLX8	YER116C	MRP4	P32902	394 aa		4.25	□□□□□ -1.73
SLX8	YER116C	SLA2	P33338	968 aa		4.25	□□□□□ -1.73
SLX8	YER116C	YKR078W	P36158	585 aa	Known RBP	4.25	□□□□□ -1.73
SLX8	YER116C	SET5	P38890	526 aa	Known RBP	4.25	□□□□□ -1.73
SLX8	YER116C	SMF1	P38925	575 aa		4.25	□□□□□ -1.73
SLX8	YER116C	SSP120	P39931	234 aa	Known RBP	4.25	□□□□□ -1.73
SLX8	YER116C	LYS4	P49367	693 aa	Predicted RBP	4.25	□□□□□ -1.73
SLX8	YER116C	SHE4	P51534	789 aa		4.25	□□□□□ -1.73
SLX8	YER116C	MNT2	P53059	558 aa		4.25	□□□□□ -1.73
SLX8	YER116C	YBP2	P53169	641 aa		4.25	□□□□□ -1.73
SLX8	YER116C	RPN14	P53196	417 aa		4.25	□□□□□ -1.73
SLX8	YER116C	ORC4	P54791	529 aa		4.25	□□□□□ -1.73
SLX8	YER116C	ARP4	P80428	489 aa		4.25	□□□□□ -1.73
SLX8	YER116C	GPD1	Q00055	391 aa	Known RBP	4.25	□□□□□ -1.73
SLX8	YER116C	ACS1	Q01574	713 aa		4.25	□□□□□ -1.73
SLX8	YER116C	RBA50	Q04418	439 aa		4.25	□□□□□ -1.73
SLX8	YER116C	MMR1	Q06324	491 aa		4.25	□□□□□ -1.73
SLX8	YER116C	LUC7	Q07508	261 aa	Predicted RBP	4.25	□□□□□ -1.73
SLX8	YER116C	NOP6	Q07623	225 aa	Known RBP	4.25	□□□□□ -1.73
SLX8	YER116C	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	4.25	□□□□□ -1.73	not detected
SLX8	YER116C	YIG1	Q08956	461 aa		4.25	□□□□□ -1.73
SLX8	YER116C	DIN7	Q12086	430 aa		4.25	□□□□□ -1.73
SLX8	YER116C	RPN5	Q12250	445 aa	Known RBP	4.25	□□□□□ -1.73
SLX8	YER116C	HER1	Q12276	1246 aa		4.25	□□□□□ -1.73
SLX8	YER116C	PRC1	P00729	532 aa		4.24	□□□□□ -1.73
SLX8	YER116C	GAL7	P08431	366 aa		4.24	□□□□□ -1.73
SLX8	YER116C	GCD1	P09032	578 aa	Predicted RBP	4.24	□□□□□ -1.73
SLX8	YER116C	SAC7	P17121	654 aa		4.24	□□□□□ -1.73
SLX8	YER116C	CWH43	P25618	953 aa		4.24	□□□□□ -1.73
SLX8	YER116C	YCR051W	P25631	222 aa		4.24	□□□□□ -1.73
SLX8	YER116C	IMG2	P25642	146 aa	Predicted RBP	4.24	□□□□□ -1.73
SLX8	YER116C	SMY1	P32364	656 aa	Known RBP	4.24	□□□□□ -1.73
SLX8	YER116C	PGM1	P33401	570 aa	Known RBP	4.24	□□□□□ -1.73
SLX8	YER116C	WHI3	P34761	661 aa	Known RBP	4.24	□□□□□ -1.73
SLX8	YER116C	HEL1	P36113	551 aa		4.24	□□□□□ -1.73
SLX8	YER116C	DAD2	P36162	133 aa		4.24	□□□□□ -1.73
SLX8	YER116C	MRPL40	P36534	297 aa		4.24	□□□□□ -1.73
SLX8	YER116C	UGA2	P38067	497 aa		4.24	□□□□□ -1.73
SLX8	YER116C	ARL1	P38116	183 aa	Known RBP	4.24	□□□□□ -1.73
SLX8	YER116C	REI1	P38344	393 aa	Predicted RBP	4.24	□□□□□ -1.73
SLX8	YER116C	DED81	P38707	554 aa	Known RBP	4.24	□□□□□ -1.73
SLX8	YER116C	FLC2	P39719	783 aa		4.24	□□□□□ -1.73
SLX8	YER116C	YEL057C	P39983	233 aa		4.24	□□□□□ -1.73
SLX8	YER116C	ARB1	P40024	610 aa	Known RBP	4.24	□□□□□ -1.73
SLX8	YER116C	ALD5	P40047	520 aa	Known RBP	4.24	□□□□□ -1.73
SLX8	YER116C	MRX1	P40050	688 aa		4.24	□□□□□ -1.73
SLX8	YER116C	MET18	P40469	1032 aa		4.24	□□□□□ -1.73
SLX8	YER116C	TCB2	P48231	1178 aa		4.24	□□□□□ -1.73
SLX8	YER116C	ARI1	P53111	347 aa	Known RBP	4.24	□□□□□ -1.73
SLX8	YER116C	LSC1	P53598	329 aa	Known RBP	4.24	□□□□□ -1.73
SLX8	YER116C	YNR071C	P53757	342 aa		4.24	□□□□□ -1.73
SLX8	YER116C	ARP5	P53946	755 aa		4.24	□□□□□ -1.73
SLX8	YER116C	YMR210W	Q03649	449 aa		4.24	□□□□□ -1.73
SLX8	YER116C	EFR3	Q03653	782 aa	Known RBP	4.24	□□□□□ -1.73
SLX8	YER116C	INP2	Q03824	705 aa		4.24	□□□□□ -1.73
SLX8	YER116C	MGR3	Q04472	501 aa		4.24	□□□□□ -1.73
SLX8	YER116C	MDM36	Q06820	579 aa		4.24	□□□□□ -1.73
SLX8	YER116C	RRT8	Q08219	342 aa		4.24	□□□□□ -1.73
SLX8	YER116C	GPB1	Q08886	897 aa		4.24	□□□□□ -1.73
SLX8	YER116C	RIM20	Q12033	661 aa		4.24	□□□□□ -1.73
SLX8	YER116C	CHS5	Q12114	671 aa	Known RBP	4.24	□□□□□ -1.73
SLX8	YER116C	NMD4	Q12129	218 aa		4.24	□□□□□ -1.73
SLX8	YER116C	AFI1	Q99222	893 aa		4.24	□□□□□ -1.73
SLX8	YER116C	RPS9A	O13516	197 aa	Known RBP	4.23	□□□□□ -1.73
SLX8	YER116C	PAP1	P29468	568 aa	Known RBP	4.23	□□□□□ -1.73
SLX8	YER116C	GPT2	P36148	743 aa		4.23	□□□□□ -1.73
SLX8	YER116C	FLR1	P38124	548 aa		4.23	□□□□□ -1.73
SLX8	YER116C	POA1	P38218	177 aa		4.23	□□□□□ -1.73
SLX8	YER116C	REG2	P38232	338 aa		4.23	□□□□□ -1.73
SLX8	YER116C	FSH1	P38777	243 aa	Known RBP	4.23	□□□□□ -1.73

Retrieved 100 of 5,963 RNA–protein pairs in 24 ms