RNA–Protein interactions for RNA: YER116C

SLX8, Transcript of Subunit of Slx5-Slx8 SUMO-targeted ubiquitin ligase (STUbL) complex, yeast

Gene SLX8, Length 825 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SLX8	YER116C	MTC1	P47018	478 aa	Known RBP	10.21	□□□□□ -0.77
SLX8	YER116C	DRS1	P32892	752 aa	Known RBP	9.36	□□□□□ -0.91
SLX8	YER116C	FAP1	P53971	965 aa		9.26	□□□□□ -0.93
SLX8	YER116C	PRY3	P47033	881 aa		8.69	□□□□□ -1.02
SLX8	YER116C	PRI1	P10363	409 aa		8.67	□□□□□ -1.02
SLX8	YER116C	AAD16	Q02895	342 aa		8.63	□□□□□ -1.03
SLX8	YER116C	ISW2	Q08773	1120 aa		8.52	□□□□□ -1.05
SLX8	YER116C	RPG1	P38249	964 aa	Known RBP	8.35	□□□□□ -1.07
SLX8	YER116C	DIP2	Q12220	943 aa	Predicted RBP	8.26	□□□□□ -1.09
SLX8	YER116C	HAA1	Q12753	694 aa	Known RBP	8.25	□□□□□ -1.09
SLX8	YER116C	YCK3	P39962	524 aa		8.16	□□□□□ -1.1
SLX8	YER116C	TSR3	Q12094	313 aa	Known RBP	8.1	□□□□□ -1.11
SLX8	YER116C	RSE1	Q04693	1361 aa	Known RBP	8.06	□□□□□ -1.12
SLX8	YER116C	TFA1	P36100	482 aa		7.99	□□□□□ -1.13
SLX8	YER116C	AVT3	P36062	692 aa		7.94	□□□□□ -1.14
SLX8	YER116C	MRPL32	P25348	183 aa		7.88	□□□□□ -1.15
SLX8	YER116C	BFR2	Q06631	534 aa	Known RBP	7.85	□□□□□ -1.15
SLX8	YER116C	REB1	P21538	810 aa		7.77	□□□□□ -1.17
SLX8	YER116C	RQC2	Q12532	1038 aa	Known RBP	7.77	□□□□□ -1.17
SLX8	YER116C	RPL17A	P05740	184 aa	Known RBP	7.76	□□□□□ -1.17
SLX8	YER116C	RPL17B	P46990	184 aa	Known RBP	7.76	□□□□□ -1.17
SLX8	YER116C	YGL015C	P33199	130 aa		7.62	□□□□□ -1.19
SLX8	YER116C	TAF7	Q05021	590 aa		7.51	□□□□□ -1.21
SLX8	YER116C	SPT21	P35209	758 aa		7.44	□□□□□ -1.22
SLX8	YER116C	CDC27	P38042	758 aa		7.38	□□□□□ -1.23
SLX8	YER116C	YKR023W	P36119	530 aa	Known RBP	7.36	□□□□□ -1.23
SLX8	YER116C	UBP10	P53874	792 aa	Predicted RBP	7.33	□□□□□ -1.24
SLX8	YER116C	TFC8	Q12308	588 aa		7.23	□□□□□ -1.25
SLX8	YER116C	MAP2	P38174	421 aa	Known RBP	7.19	□□□□□ -1.26
SLX8	YER116C	RIM101	P33400	625 aa		7.18	□□□□□ -1.26
SLX8	YER116C	HO	P09932	586 aa		7.16	□□□□□ -1.26
SLX8	YER116C	DCD1	P06773	312 aa		7.09	□□□□□ -1.27
SLX8	YER116C	BUD31	P25337	157 aa	Predicted RBP	7.03	□□□□□ -1.28
SLX8	YER116C	TIF4632	P39936	914 aa	Known RBP	7.03	□□□□□ -1.28
SLX8	YER116C	DMA1	P38823	416 aa		7.02	□□□□□ -1.29
SLX8	YER116C	SCY1	P53009	804 aa		7.02	□□□□□ -1.29
SLX8	YER116C	SLX5	P32828	619 aa	Known RBP	7	□□□□□ -1.29
SLX8	YER116C	TGL3	P40308	642 aa		6.99	□□□□□ -1.29
SLX8	YER116C	BCH2	P36122	765 aa		6.97	□□□□□ -1.29
SLX8	YER116C	OXP1	P28273	1286 aa		6.86	□□□□□ -1.31
SLX8	YER116C	LEO1	P38439	464 aa		6.84	□□□□□ -1.31
SLX8	YER116C	UBP9	P39967	754 aa		6.84	□□□□□ -1.31
SLX8	YER116C	YIL055C	P40523	627 aa	Known RBP	6.83	□□□□□ -1.32
SLX8	YER116C	EPS1	P40557	701 aa		6.81	□□□□□ -1.32
SLX8	YER116C	PTP3	P40048	928 aa		6.8	□□□□□ -1.32
SLX8	YER116C	BDF1	P35817	686 aa		6.78	□□□□□ -1.32
SLX8	YER116C	BBC1	P47068	1157 aa		6.73	□□□□□ -1.33
SLX8	YER116C	RSM7	P47150	247 aa		6.72	□□□□□ -1.33
SLX8	YER116C	NSR1	P27476	414 aa	Known RBP RIP-Chip data	6.71	□□□□□ -1.34	not detected
SLX8	YER116C	MST1	P07236	462 aa		6.69	□□□□□ -1.34
SLX8	YER116C	AI2	P03876	854 aa		6.66	□□□□□ -1.34
SLX8	YER116C	SIS1	P25294	352 aa	Known RBP	6.66	□□□□□ -1.34
SLX8	YER116C	YOR238W	Q08634	303 aa		6.64	□□□□□ -1.35
SLX8	YER116C	YAH1	Q12184	172 aa	Known RBP	6.62	□□□□□ -1.35
SLX8	YER116C	YAP5	P40574	245 aa		6.59	□□□□□ -1.35
SLX8	YER116C	YLR271W	Q06152	274 aa		6.55	□□□□□ -1.36
SLX8	YER116C	PSD2	P53037	1138 aa	Known RBP	6.51	□□□□□ -1.37
SLX8	YER116C	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	6.51	□□□□□ -1.37	not detected
SLX8	YER116C	YBL029C-A	Q3E756	94 aa		6.51	□□□□□ -1.37
SLX8	YER116C	SSP1	P38871	571 aa		6.48	□□□□□ -1.37
SLX8	YER116C	VNX1	P42839	908 aa		6.48	□□□□□ -1.37
SLX8	YER116C	GTT3	P39996	337 aa		6.43	□□□□□ -1.38
SLX8	YER116C	SPP1	Q03012	353 aa		6.43	□□□□□ -1.38
SLX8	YER116C	LEU3	P08638	886 aa		6.4	□□□□□ -1.38
SLX8	YER116C	MRM1	P25270	412 aa		6.39	□□□□□ -1.39
SLX8	YER116C	TIF11	P38912	153 aa	Known RBP	6.39	□□□□□ -1.39
SLX8	YER116C	WSC3	Q12215	556 aa		6.38	□□□□□ -1.39
SLX8	YER116C	MGA2	P40578	1113 aa		6.36	□□□□□ -1.39
SLX8	YER116C	DMA2	P53924	522 aa		6.35	□□□□□ -1.39
SLX8	YER116C	MSB4	Q12317	492 aa		6.35	□□□□□ -1.39
SLX8	YER116C	YMR1	P47147	688 aa	Known RBP RIP-Chip data	6.32	□□□□□ -1.4	not detected
SLX8	YER116C	EAP1	P36041	632 aa	Known RBP	6.31	□□□□□ -1.4
SLX8	YER116C	RTG3	P38165	486 aa		6.31	□□□□□ -1.4
SLX8	YER116C	FKH1	P40466	484 aa		6.31	□□□□□ -1.4
SLX8	YER116C	AIR2	Q12476	344 aa	Known RBP	6.29	□□□□□ -1.4
SLX8	YER116C	CST9	Q06032	482 aa		6.28	□□□□□ -1.4
SLX8	YER116C	ULI1	P43604	169 aa		6.27	□□□□□ -1.41
SLX8	YER116C	YJL171C	P46992	396 aa		6.27	□□□□□ -1.41
SLX8	YER116C	PIB1	Q06651	286 aa		6.27	□□□□□ -1.41
SLX8	YER116C	IOC2	Q12072	812 aa		6.27	□□□□□ -1.41
SLX8	YER116C	VPS29	P38759	282 aa		6.26	□□□□□ -1.41
SLX8	YER116C	LDB19	Q12502	818 aa		6.26	□□□□□ -1.41
SLX8	YER116C	DBP1	P24784	617 aa	Known RBP	6.24	□□□□□ -1.41
SLX8	YER116C	SAS10	Q12136	610 aa	Predicted RBP	6.24	□□□□□ -1.41
SLX8	YER116C	YOL036W	Q08206	761 aa		6.23	□□□□□ -1.41
SLX8	YER116C	ABP1	P15891	592 aa	Known RBP	6.22	□□□□□ -1.41
SLX8	YER116C	SAM3	Q08986	587 aa		6.22	□□□□□ -1.41
SLX8	YER116C	VMA1	P17255	1071 aa	Known RBP	6.21	□□□□□ -1.42
SLX8	YER116C	AIM44	Q99299	758 aa		6.21	□□□□□ -1.42
SLX8	YER116C	RLF2	Q12495	606 aa		6.2	□□□□□ -1.42
SLX8	YER116C	BMT6	Q12291	365 aa		6.19	□□□□□ -1.42
SLX8	YER116C	STS1	P38637	319 aa		6.18	□□□□□ -1.42
SLX8	YER116C	IFH1	P39520	1085 aa		6.18	□□□□□ -1.42
SLX8	YER116C	SET4	P42948	560 aa		6.18	□□□□□ -1.42
SLX8	YER116C	RPN1	P38764	993 aa	Known RBP	6.17	□□□□□ -1.42
SLX8	YER116C	TRP5	P00931	707 aa	Known RBP	6.16	□□□□□ -1.42
SLX8	YER116C	NAP1	P25293	417 aa	Known RBP	6.16	□□□□□ -1.42
SLX8	YER116C	SEC61	P32915	480 aa		6.16	□□□□□ -1.42
SLX8	YER116C	YFR006W	P43590	535 aa		6.16	□□□□□ -1.42
SLX8	YER116C	RTG1	P32607	177 aa		6.15	□□□□□ -1.42

Retrieved 100 of 5,963 RNA–protein pairs in 534.1 ms