RNA–Protein interactions for RNA: YCR021C

HSP30, Transcript of Negative regulator of the H(+)-ATPase Pma1p, yeast

Gene HSP30, Length 999 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HSP30	YCR021C	YJL045W	P47052	634 aa		4.21	□□□□□ -1.74
HSP30	YCR021C	YJR124C	P47159	448 aa		4.21	□□□□□ -1.74
HSP30	YCR021C	NCE103	P53615	221 aa		4.21	□□□□□ -1.74
HSP30	YCR021C	YNL034W	P53963	612 aa		4.21	□□□□□ -1.74
HSP30	YCR021C	YNL018C	P53976	612 aa		4.21	□□□□□ -1.74
HSP30	YCR021C	ADA2	Q02336	434 aa		4.21	□□□□□ -1.74
HSP30	YCR021C	SPO71	Q03868	1245 aa		4.21	□□□□□ -1.74
HSP30	YCR021C	POB3	Q04636	552 aa	Known RBP	4.21	□□□□□ -1.74
HSP30	YCR021C	ECI1	Q05871	280 aa		4.21	□□□□□ -1.74
HSP30	YCR021C	ECM22	Q05958	814 aa	Predicted RBP	4.21	□□□□□ -1.74
HSP30	YCR021C	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	4.21	□□□□□ -1.74	not detected
HSP30	YCR021C	AIM39	Q08223	395 aa		4.21	□□□□□ -1.74
HSP30	YCR021C	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	4.21	□□□□□ -1.74	RIP-Chip
HSP30	YCR021C	RMP1	Q12530	201 aa		4.21	□□□□□ -1.74
HSP30	YCR021C	YBL113C	Q7M4S9	792 aa		4.21	□□□□□ -1.74
HSP30	YCR021C	PUT4	P15380	627 aa		4.2	□□□□□ -1.74
HSP30	YCR021C	RAD27	P26793	382 aa		4.2	□□□□□ -1.74
HSP30	YCR021C	PYC2	P32327	1180 aa	Known RBP	4.2	□□□□□ -1.74
HSP30	YCR021C	MSG5	P38590	489 aa		4.2	□□□□□ -1.74
HSP30	YCR021C	STB5	P38699	743 aa		4.2	□□□□□ -1.74
HSP30	YCR021C	END3	P39013	349 aa		4.2	□□□□□ -1.74
HSP30	YCR021C	FLC2	P39719	783 aa		4.2	□□□□□ -1.74
HSP30	YCR021C	SAP1	P39955	897 aa	Known RBP	4.2	□□□□□ -1.74
HSP30	YCR021C	TMA108	P40462	946 aa		4.2	□□□□□ -1.74
HSP30	YCR021C	CEP3	P40969	608 aa		4.2	□□□□□ -1.74
HSP30	YCR021C	CNN1	P43618	361 aa		4.2	□□□□□ -1.74
HSP30	YCR021C	NMD5	P46970	1048 aa		4.2	□□□□□ -1.74
HSP30	YCR021C	MCM6	P53091	1017 aa	Known RBP	4.2	□□□□□ -1.74
HSP30	YCR021C	YGR130C	P53278	816 aa		4.2	□□□□□ -1.74
HSP30	YCR021C	TRM112	P53738	135 aa	Predicted RBP	4.2	□□□□□ -1.74
HSP30	YCR021C	YNL040W	P53960	456 aa	Predicted RBP	4.2	□□□□□ -1.74
HSP30	YCR021C	KTR6	P54070	446 aa		4.2	□□□□□ -1.74
HSP30	YCR021C	CDC55	Q00362	526 aa		4.2	□□□□□ -1.74
HSP30	YCR021C	PIR3	Q03180	325 aa		4.2	□□□□□ -1.74
HSP30	YCR021C	RPN4	Q03465	531 aa		4.2	□□□□□ -1.74
HSP30	YCR021C	ATG16	Q03818	150 aa		4.2	□□□□□ -1.74
HSP30	YCR021C	RKM2	Q03942	479 aa		4.2	□□□□□ -1.74
HSP30	YCR021C	IVY1	Q04934	453 aa		4.2	□□□□□ -1.74
HSP30	YCR021C	SGO1	Q08490	590 aa		4.2	□□□□□ -1.74
HSP30	YCR021C	YPQ1	Q12010	308 aa		4.2	□□□□□ -1.74
HSP30	YCR021C	AIM41	Q12032	185 aa		4.2	□□□□□ -1.74
HSP30	YCR021C	LCB4	Q12246	624 aa		4.2	□□□□□ -1.74
HSP30	YCR021C	YPR117W	Q06116	2489 aa		4.19	□□□□□ -1.74
HSP30	YCR021C	ADE3	P07245	946 aa	Known RBP	4.19	□□□□□ -1.74
HSP30	YCR021C	CBF1	P17106	351 aa		4.19	□□□□□ -1.74
HSP30	YCR021C	AEP2	P22136	580 aa		4.19	□□□□□ -1.74
HSP30	YCR021C	DPB3	P27344	201 aa		4.19	□□□□□ -1.74
HSP30	YCR021C	MEI4	P29467	408 aa		4.19	□□□□□ -1.74
HSP30	YCR021C	PUB1	P32588	453 aa	Known RBP RIP-Chip data	4.19	□□□□□ -1.74	RIP-Chip
HSP30	YCR021C	DSS4	P32601	143 aa		4.19	□□□□□ -1.74
HSP30	YCR021C	HSP78	P33416	811 aa		4.19	□□□□□ -1.74
HSP30	YCR021C	LTV1	P34078	463 aa		4.19	□□□□□ -1.74
HSP30	YCR021C	YMC2	P38087	329 aa		4.19	□□□□□ -1.74
HSP30	YCR021C	YBR225W	P38321	900 aa		4.19	□□□□□ -1.74
HSP30	YCR021C	SWC5	P38326	303 aa		4.19	□□□□□ -1.74
HSP30	YCR021C	URA8	P38627	578 aa	Predicted RBP	4.19	□□□□□ -1.74
HSP30	YCR021C	QDR1	P40475	563 aa		4.19	□□□□□ -1.74
HSP30	YCR021C	HOP2	P53187	214 aa		4.19	□□□□□ -1.74
HSP30	YCR021C	YGR127W	P53275	312 aa		4.19	□□□□□ -1.74
HSP30	YCR021C	MTD1	Q02046	320 aa	Known RBP	4.19	□□□□□ -1.74
HSP30	YCR021C	HAS1	Q03532	505 aa	Known RBP	4.19	□□□□□ -1.74
HSP30	YCR021C	ARA2	Q04212	335 aa		4.19	□□□□□ -1.74
HSP30	YCR021C	TAF9	Q05027	157 aa		4.19	□□□□□ -1.74
HSP30	YCR021C	ATG23	Q06671	453 aa		4.19	□□□□□ -1.74
HSP30	YCR021C	NBP2	Q12163	236 aa		4.19	□□□□□ -1.74
HSP30	YCR021C	NDJ1	Q12366	352 aa		4.19	□□□□□ -1.74
HSP30	YCR021C	SFI1	Q12369	946 aa		4.19	□□□□□ -1.74
HSP30	YCR021C	UBR2	Q07963	1872 aa		4.19	□□□□□ -1.74
HSP30	YCR021C	YLR422W	Q06409	1932 aa		4.19	□□□□□ -1.74
HSP30	YCR021C	ATP1	P07251	545 aa	Known RBP	4.18	□□□□□ -1.74
HSP30	YCR021C	RPB2	P08518	1224 aa	Known RBP	4.18	□□□□□ -1.74
HSP30	YCR021C	ERS1	P17261	260 aa		4.18	□□□□□ -1.74
HSP30	YCR021C	MET16	P18408	261 aa	Predicted RBP	4.18	□□□□□ -1.74
HSP30	YCR021C	STE11	P23561	717 aa		4.18	□□□□□ -1.74
HSP30	YCR021C	RAD16	P31244	790 aa		4.18	□□□□□ -1.74
HSP30	YCR021C	GCG1	P32656	232 aa	Known RBP	4.18	□□□□□ -1.74
HSP30	YCR021C	YKR051W	P36142	418 aa		4.18	□□□□□ -1.74
HSP30	YCR021C	ECM2	P38241	364 aa	Known RBP	4.18	□□□□□ -1.74
HSP30	YCR021C	SHE3	P38272	425 aa	Known RBP	4.18	□□□□□ -1.74
HSP30	YCR021C	SAK1	P38990	1142 aa		4.18	□□□□□ -1.74
HSP30	YCR021C	CIN4	P39110	191 aa		4.18	□□□□□ -1.74
HSP30	YCR021C	ATM1	P40416	690 aa		4.18	□□□□□ -1.74
HSP30	YCR021C	MIC19	P43594	170 aa		4.18	□□□□□ -1.74
HSP30	YCR021C	TRF5	P48561	642 aa	Known RBP	4.18	□□□□□ -1.74
HSP30	YCR021C	UTP8	P53276	713 aa	Known RBP	4.18	□□□□□ -1.74
HSP30	YCR021C	TIM13	P53299	105 aa		4.18	□□□□□ -1.74
HSP30	YCR021C	COQ6	P53318	479 aa		4.18	□□□□□ -1.74
HSP30	YCR021C	CEG1	Q01159	459 aa	Predicted RBP	4.18	□□□□□ -1.74
HSP30	YCR021C	RSC4	Q02206	625 aa		4.18	□□□□□ -1.74
HSP30	YCR021C	KAP95	Q06142	861 aa	Known RBP	4.18	□□□□□ -1.74
HSP30	YCR021C	BSP1	Q06604	576 aa		4.18	□□□□□ -1.74
HSP30	YCR021C	THI20	Q08224	551 aa		4.18	□□□□□ -1.74
HSP30	YCR021C	YDR018C	Q12185	396 aa		4.18	□□□□□ -1.74
HSP30	YCR021C	LPX1	Q12405	387 aa	Known RBP	4.18	□□□□□ -1.74
HSP30	YCR021C	ARP7	Q12406	477 aa		4.18	□□□□□ -1.74
HSP30	YCR021C	ZRT2	Q12436	422 aa		4.18	□□□□□ -1.74
HSP30	YCR021C	VPS5	Q92331	675 aa		4.18	□□□□□ -1.74
HSP30	YCR021C	IZH4	Q99393	312 aa		4.18	□□□□□ -1.74
HSP30	YCR021C	PET111	P08468	800 aa		4.17	□□□□□ -1.74
HSP30	YCR021C	CDC24	P11433	854 aa	Predicted RBP	4.17	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 19.9 ms