RNA–Protein interactions for RNA: ENSMUST00000163419.7

Scaf4-202, Transcript of SR-related CTD-associated factor 4, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Scaf4, Length 4,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4-202ENSMUST00000163419 Id3P41133 119 aa9.06□□□□□ -0.96
Scaf4-202ENSMUST00000163419 Hist3h2bbQ8CGP0 126 aa9.06□□□□□ -0.96
Scaf4-202ENSMUST00000163419 Foxi1Q922I5 372 aa9.06□□□□□ -0.96
Scaf4-202ENSMUST00000163419 Hist3h2baQ9D2U9 126 aa9.06□□□□□ -0.96
Scaf4-202ENSMUST00000163419 Klk11Q9QYN3 276 aa9.06□□□□□ -0.96
Scaf4-202ENSMUST00000163419 Tcrg-C1A0A075B5Z0 172 aa9.06□□□□□ -0.96
Scaf4-202ENSMUST00000163419 Trav9d-3A0A075B695 113 aa9.06□□□□□ -0.96
Scaf4-202ENSMUST00000163419 Defa28D3Z1V9 94 aa9.06□□□□□ -0.96
Scaf4-202ENSMUST00000163419 Gm11444F6QMA6 170 aa9.06□□□□□ -0.96
Scaf4-202ENSMUST00000163419 Tcrg-C3L7N479 172 aa9.06□□□□□ -0.96
Scaf4-202ENSMUST00000163419 Ighv13-2A0A0A6YWN3 119 aa9.06□□□□□ -0.96
Scaf4-202ENSMUST00000163419 Ighv1-12A0A0A6YXJ9 117 aa9.06□□□□□ -0.96
Scaf4-202ENSMUST00000163419 Dand5Q76LW6 185 aa9.06□□□□□ -0.96
Scaf4-202ENSMUST00000163419 Try10Q792Z1 246 aaKnown RBP9.06□□□□□ -0.96
Scaf4-202ENSMUST00000163419 Mrpl32Q9DCI9 187 aaKnown RBP9.06□□□□□ -0.96
Scaf4-202ENSMUST00000163419 Myo15bI7HPW8 3033 aa9.06□□□□□ -0.96
Scaf4-202ENSMUST00000163419 Scgb1b19F6WYW0 93 aa9.05□□□□□ -0.96
Scaf4-202ENSMUST00000163419 Hist1h2bfP10853 126 aa9.05□□□□□ -0.96
Scaf4-202ENSMUST00000163419 Hist1h2bbQ64475 126 aa9.05□□□□□ -0.96
Scaf4-202ENSMUST00000163419 Il22ra2Q80XF5 230 aa9.05□□□□□ -0.96
Scaf4-202ENSMUST00000163419 Hist1h2bkQ8CGP1 126 aaKnown RBP9.05□□□□□ -0.96
Scaf4-202ENSMUST00000163419 Hist1h2bpQ8CGP2 126 aaKnown RBP9.05□□□□□ -0.96
Scaf4-202ENSMUST00000163419 Gm867A0A1W2P7T4 151 aa9.05□□□□□ -0.96
Scaf4-202ENSMUST00000163419 4930447F04RikA2AFR2 126 aa9.05□□□□□ -0.96
Scaf4-202ENSMUST00000163419 Klf12O35738 402 aa9.05□□□□□ -0.96
Scaf4-202ENSMUST00000163419 P04942 107 aa9.05□□□□□ -0.96
Scaf4-202ENSMUST00000163419 Foxc1Q61572 553 aa9.05□□□□□ -0.96
Scaf4-202ENSMUST00000163419 9230109A22RikQ8BHE6 111 aa9.05□□□□□ -0.96
Scaf4-202ENSMUST00000163419 Mrpl53Q9D1H8 118 aaKnown RBP9.05□□□□□ -0.96
Scaf4-202ENSMUST00000163419 Ighv12-3A0A075B5T1 117 aa9.05□□□□□ -0.96
Scaf4-202ENSMUST00000163419 Gm15217A2CG07 155 aa9.05□□□□□ -0.96
Scaf4-202ENSMUST00000163419 PlnP61014 52 aa9.05□□□□□ -0.96
Scaf4-202ENSMUST00000163419 Defb2P82020 71 aa9.05□□□□□ -0.96
Scaf4-202ENSMUST00000163419 Znf329Q6GQR8 522 aa9.05□□□□□ -0.96
Scaf4-202ENSMUST00000163419 RhohQ9D3G9 191 aa9.05□□□□□ -0.96
Scaf4-202ENSMUST00000163419 Gm27027S4R1M6 97 aa9.05□□□□□ -0.96
Scaf4-202ENSMUST00000163419 Tnrc6aQ3UHK8 1896 aaKnown RBP9.05□□□□□ -0.96
Scaf4-202ENSMUST00000163419 Hint1P70349 126 aaKnown RBP9.04□□□□□ -0.96
Scaf4-202ENSMUST00000163419 Atp5iQ06185 71 aaKnown RBP9.04□□□□□ -0.96
Scaf4-202ENSMUST00000163419 Gm904Q3V2L5 102 aa9.04□□□□□ -0.96
Scaf4-202ENSMUST00000163419 Gm1553Q66VB7 94 aa9.04□□□□□ -0.96
Scaf4-202ENSMUST00000163419 E130116L18RikQ8BMV6 101 aa9.04□□□□□ -0.96
Scaf4-202ENSMUST00000163419 Plpp2Q9DAX2 276 aa9.04□□□□□ -0.96
Scaf4-202ENSMUST00000163419 Fxyd1Q9Z239 92 aa9.04□□□□□ -0.96
Scaf4-202ENSMUST00000163419 Igkv4-62A0A0G2JDW9 117 aa9.04□□□□□ -0.96
Scaf4-202ENSMUST00000163419 Gm933J3QPC1 141 aa9.04□□□□□ -0.96
Scaf4-202ENSMUST00000163419 Defa-rs7P50715 91 aa9.04□□□□□ -0.96
Scaf4-202ENSMUST00000163419 Phpt1Q9DAK9 124 aa9.04□□□□□ -0.96
Scaf4-202ENSMUST00000163419 Gm26938S4R185 226 aa9.04□□□□□ -0.96
Scaf4-202ENSMUST00000163419 Psmg3Q9CZH3 122 aa9.04□□□□□ -0.96
Scaf4-202ENSMUST00000163419 EsdQ9R0P3 282 aa9.04□□□□□ -0.96
Scaf4-202ENSMUST00000163419 Hoxd3P09027 433 aa9.03□□□□□ -0.96
Scaf4-202ENSMUST00000163419 Tnfrsf13bQ9ET35 249 aa9.03□□□□□ -0.96
Scaf4-202ENSMUST00000163419 Supt4h1bQ9Z199 117 aa9.03□□□□□ -0.96
Scaf4-202ENSMUST00000163419 Eml6Q5SQM0 1958 aa9.03□□□□□ -0.96
Scaf4-202ENSMUST00000163419 Ighv1-50A0A075B5W1 117 aa9.03□□□□□ -0.96
Scaf4-202ENSMUST00000163419 Bak1O08734 209 aa9.03□□□□□ -0.96
Scaf4-202ENSMUST00000163419 P01750 117 aa9.03□□□□□ -0.96
Scaf4-202ENSMUST00000163419 Tmem256Q5F285 113 aa9.03□□□□□ -0.96
Scaf4-202ENSMUST00000163419 NpbQ8K4P1 119 aa9.03□□□□□ -0.96
Scaf4-202ENSMUST00000163419 Polr3kQ9CQZ7 108 aa9.03□□□□□ -0.96
Scaf4-202ENSMUST00000163419 Ankrd39Q9D2X0 183 aa9.03□□□□□ -0.96
Scaf4-202ENSMUST00000163419 DdtO35215 118 aa9.03□□□□□ -0.96
Scaf4-202ENSMUST00000163419 Cd24P24807 76 aa9.03□□□□□ -0.96
Scaf4-202ENSMUST00000163419 Gm10842Q3U587 122 aa9.03□□□□□ -0.96
Scaf4-202ENSMUST00000163419 P01630 113 aa9.02□□□□□ -0.96
Scaf4-202ENSMUST00000163419 P01896 185 aa9.02□□□□□ -0.96
Scaf4-202ENSMUST00000163419 Plp1P60202 277 aa9.02□□□□□ -0.96
Scaf4-202ENSMUST00000163419 Gm10188Q3V432 135 aa9.02□□□□□ -0.96
Scaf4-202ENSMUST00000163419 Gm5868Q8BJG1 145 aa9.02□□□□□ -0.96
Scaf4-202ENSMUST00000163419 Rnf183Q8QZS5 190 aa9.02□□□□□ -0.96
Scaf4-202ENSMUST00000163419 Tex48Q9DA81 110 aa9.02□□□□□ -0.96
Scaf4-202ENSMUST00000163419 LenepQ9WVB6 61 aa9.02□□□□□ -0.96
Scaf4-202ENSMUST00000163419 Rs1Q9Z1L4 224 aa9.02□□□□□ -0.96
Scaf4-202ENSMUST00000163419 Ighv1-19A0A0A6YWX0 117 aa9.02□□□□□ -0.97
Scaf4-202ENSMUST00000163419 Gm20481G3UXK4 153 aa9.02□□□□□ -0.97
Scaf4-202ENSMUST00000163419 P01739 132 aa9.02□□□□□ -0.97
Scaf4-202ENSMUST00000163419 Lyrm9Q3UN90 78 aa9.02□□□□□ -0.97
Scaf4-202ENSMUST00000163419 D130052B06RikQ3UW13 202 aa9.02□□□□□ -0.97
Scaf4-202ENSMUST00000163419 Ighv2-7A0A075B5Q8 116 aa9.02□□□□□ -0.97
Scaf4-202ENSMUST00000163419 P01793 123 aa9.02□□□□□ -0.97
Scaf4-202ENSMUST00000163419 Rnase1P00683 149 aa9.02□□□□□ -0.97
Scaf4-202ENSMUST00000163419 Gtsf1Q9DAN6 167 aa9.02□□□□□ -0.97
Scaf4-202ENSMUST00000163419 Pgpep1Q9ESW8 209 aa9.02□□□□□ -0.97
Scaf4-202ENSMUST00000163419 Plekhb2Q9QZC7 221 aa9.02□□□□□ -0.97
Scaf4-202ENSMUST00000163419 Igkv4-57-1A0A075B5M4 119 aa9.01□□□□□ -0.97
Scaf4-202ENSMUST00000163419 Trav14n-3A0A075B645 120 aa9.01□□□□□ -0.97
Scaf4-202ENSMUST00000163419 Edn1P22387 202 aa9.01□□□□□ -0.97
Scaf4-202ENSMUST00000163419 Znf664Q4VA44 261 aa9.01□□□□□ -0.97
Scaf4-202ENSMUST00000163419 9430097D07RikQ8BS47 195 aa9.01□□□□□ -0.97
Scaf4-202ENSMUST00000163419 Pfn2Q9JJV2 140 aa9.01□□□□□ -0.97
Scaf4-202ENSMUST00000163419 Trav7-2Q5R1I3 112 aa9.01□□□□□ -0.97
Scaf4-202ENSMUST00000163419 Slamf6Q9ET39 351 aa9.01□□□□□ -0.97
Scaf4-202ENSMUST00000163419 OtorQ9JIE3 128 aa9.01□□□□□ -0.97
Scaf4-202ENSMUST00000163419 Bcl6bO88282 474 aa9□□□□□ -0.97
Scaf4-202ENSMUST00000163419 Igkv3-9A0A140T8P4 119 aa9□□□□□ -0.97
Scaf4-202ENSMUST00000163419 Gm17455G3UW87 128 aa9□□□□□ -0.97
Scaf4-202ENSMUST00000163419 Trav7d-3Q5R1I1 112 aa9□□□□□ -0.97
Scaf4-202ENSMUST00000163419 Sec11aQ9R0P6 179 aa9□□□□□ -0.97
Scaf4-202ENSMUST00000163419 Itpr3P70227 2670 aa9□□□□□ -0.97
Retrieved 100 of 22,080 RNA–protein pairs in 63.5 ms