RNA–Protein interactions for RNA: ENSMUST00000163419.7

Scaf4-202, Transcript of SR-related CTD-associated factor 4, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Scaf4, Length 4,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4-202ENSMUST00000163419 Rhox8Q6VSS7 320 aa21.46■■□□□ 1.03
Scaf4-202ENSMUST00000163419 Ccdc136Q3TVA9 1136 aa19.21■□□□□ 0.67
Scaf4-202ENSMUST00000163419 Esf1Q3V1V3 845 aaKnown RBP19.06■□□□□ 0.64
Scaf4-202ENSMUST00000163419 Cngb1E1AZ71 1325 aa18.87■□□□□ 0.61
Scaf4-202ENSMUST00000163419 NischQ80TM9 1593 aa18.84■□□□□ 0.61
Scaf4-202ENSMUST00000163419 Ehmt2Q9Z148 1263 aaKnown RBP18.81■□□□□ 0.6
Scaf4-202ENSMUST00000163419 Zeb1Q64318 1117 aa18.65■□□□□ 0.58
Scaf4-202ENSMUST00000163419 Gab3Q8BSM5 595 aa18.63■□□□□ 0.57
Scaf4-202ENSMUST00000163419 Trim41Q5NCC3 630 aa18.48■□□□□ 0.55
Scaf4-202ENSMUST00000163419 Gm35339A0A140LHH9 1649 aa18.47■□□□□ 0.55
Scaf4-202ENSMUST00000163419 Npm2Q80W85 207 aa18.43■□□□□ 0.54
Scaf4-202ENSMUST00000163419 Ube2uB1AUC4 352 aa18.37■□□□□ 0.53
Scaf4-202ENSMUST00000163419 Myt1lP97500 1187 aa18.36■□□□□ 0.53
Scaf4-202ENSMUST00000163419 Abcc9P70170 1546 aa18.33■□□□□ 0.53
Scaf4-202ENSMUST00000163419 Il27Q8K3I6 234 aa18.16■□□□□ 0.5
Scaf4-202ENSMUST00000163419 Wdr66E9Q743 1299 aa17.88■□□□□ 0.45
Scaf4-202ENSMUST00000163419 Abcc8B2RUS7 1588 aa17.83■□□□□ 0.44
Scaf4-202ENSMUST00000163419 Rtl1Q7M732 1744 aa17.78■□□□□ 0.44
Scaf4-202ENSMUST00000163419 Las1lA2BE28 776 aaKnown RBP17.74■□□□□ 0.43
Scaf4-202ENSMUST00000163419 Zcchc6Q5BLK4 1491 aaKnown RBP17.69■□□□□ 0.42
Scaf4-202ENSMUST00000163419 UbtfP25976 765 aaKnown RBP17.68■□□□□ 0.42
Scaf4-202ENSMUST00000163419 Rpgrip1Q9EPQ2 1331 aa17.68■□□□□ 0.42
Scaf4-202ENSMUST00000163419 Ap3b1Q9Z1T1 1105 aa17.5■□□□□ 0.39
Scaf4-202ENSMUST00000163419 Ccdc180J3QNE4 1664 aa17.46■□□□□ 0.39
Scaf4-202ENSMUST00000163419 Npm1Q61937 292 aaKnown RBP17.33■□□□□ 0.36
Scaf4-202ENSMUST00000163419 Fam50aQ9WV03 339 aaKnown RBP17.3■□□□□ 0.36
Scaf4-202ENSMUST00000163419 Ifnlr1Q8CGK5 535 aa17.27■□□□□ 0.35
Scaf4-202ENSMUST00000163419 Slc24a1Q91WD8 1130 aa17.2■□□□□ 0.34
Scaf4-202ENSMUST00000163419 Neurod1Q60867 357 aa17.19■□□□□ 0.34
Scaf4-202ENSMUST00000163419 HrcG5E8J6 738 aa17.15■□□□□ 0.34
Scaf4-202ENSMUST00000163419 Zbtb7cQ8VCZ7 619 aa17.15■□□□□ 0.34
Scaf4-202ENSMUST00000163419 Lmod2Q3UHZ5 550 aa17.08■□□□□ 0.32
Scaf4-202ENSMUST00000163419 Os9Q8K2C7 672 aa17.04■□□□□ 0.32
Scaf4-202ENSMUST00000163419 Plppr3Q7TPB0 716 aa17.03■□□□□ 0.32
Scaf4-202ENSMUST00000163419 Fkbp15Q6P9Q6 1216 aaKnown RBP17.03■□□□□ 0.32
Scaf4-202ENSMUST00000163419 NefmP08553 848 aa16.98■□□□□ 0.31
Scaf4-202ENSMUST00000163419 Ubl4bQ9CQ84 188 aa16.96■□□□□ 0.31
Scaf4-202ENSMUST00000163419 Hnrnpul2Q00PI9 745 aaKnown RBP16.94■□□□□ 0.3
Scaf4-202ENSMUST00000163419 Ppargc1bQ8VHJ7 1014 aa16.92■□□□□ 0.3
Scaf4-202ENSMUST00000163419 Pelp1Q9DBD5 1123 aaKnown RBP16.87■□□□□ 0.29
Scaf4-202ENSMUST00000163419 Plekhg3Q4VAC9 1341 aa16.86■□□□□ 0.29
Scaf4-202ENSMUST00000163419 Gm13697A2AK42 830 aa16.86■□□□□ 0.29
Scaf4-202ENSMUST00000163419 NclP09405 707 aaKnown RBP16.85■□□□□ 0.29
Scaf4-202ENSMUST00000163419 Acin1Q9JIX8 1338 aaKnown RBP16.85■□□□□ 0.29
Scaf4-202ENSMUST00000163419 Ttbk1Q6PCN3 1308 aa16.75■□□□□ 0.27
Scaf4-202ENSMUST00000163419 Dcaf1Q80TR8 1506 aa16.73■□□□□ 0.27
Scaf4-202ENSMUST00000163419 Zbtb4Q5F293 982 aa16.71■□□□□ 0.27
Scaf4-202ENSMUST00000163419 Chic1Q8CBW7 227 aa16.67■□□□□ 0.26
Scaf4-202ENSMUST00000163419 Erich6D3Z6S9 713 aa16.66■□□□□ 0.26
Scaf4-202ENSMUST00000163419 Atp1b4Q99ME6 356 aa16.63■□□□□ 0.25
Scaf4-202ENSMUST00000163419 Anp32bQ9EST5 272 aaKnown RBP16.62■□□□□ 0.25
Scaf4-202ENSMUST00000163419 NrdcQ8BHG1 1161 aa16.59■□□□□ 0.25
Scaf4-202ENSMUST00000163419 Brd4Q9ESU6 1400 aaKnown RBP16.58■□□□□ 0.25
Scaf4-202ENSMUST00000163419 Stra8P70278 393 aa16.57■□□□□ 0.24
Scaf4-202ENSMUST00000163419 Prdm10Q3UTQ7 1184 aa16.55■□□□□ 0.24
Scaf4-202ENSMUST00000163419 Pcgf6Q99NA9 353 aa16.54■□□□□ 0.24
Scaf4-202ENSMUST00000163419 Gm13695A2AK44 830 aa16.54■□□□□ 0.24
Scaf4-202ENSMUST00000163419 Rb1cc1Q9ESK9 1588 aa16.53■□□□□ 0.24
Scaf4-202ENSMUST00000163419 Mier1Q5UAK0 511 aa16.52■□□□□ 0.24
Scaf4-202ENSMUST00000163419 Eid3Q3V124 375 aa16.52■□□□□ 0.24
Scaf4-202ENSMUST00000163419 ScribQ80U72 1612 aa16.49■□□□□ 0.23
Scaf4-202ENSMUST00000163419 TonslQ6NZL6 1363 aa16.47■□□□□ 0.23
Scaf4-202ENSMUST00000163419 Eif5bQ05D44 1216 aaKnown RBP16.47■□□□□ 0.23
Scaf4-202ENSMUST00000163419 Clip1Q922J3 1391 aa16.4■□□□□ 0.22
Scaf4-202ENSMUST00000163419 Cdk11bP24788 784 aaKnown RBP16.39■□□□□ 0.21
Scaf4-202ENSMUST00000163419 Baz1aO88379 1555 aa16.36■□□□□ 0.21
Scaf4-202ENSMUST00000163419 Chic2Q9D9G3 165 aa16.36■□□□□ 0.21
Scaf4-202ENSMUST00000163419 Mapk8ip2Q9ERE9 830 aa16.36■□□□□ 0.21
Scaf4-202ENSMUST00000163419 NacadQ5SWP3 1504 aa16.34■□□□□ 0.21
Scaf4-202ENSMUST00000163419 Kif15Q6P9L6 1387 aa16.32■□□□□ 0.2
Scaf4-202ENSMUST00000163419 Safb2Q80YR5 991 aaKnown RBP16.31■□□□□ 0.2
Scaf4-202ENSMUST00000163419 Nop58Q6DFW4 536 aaKnown RBP16.3■□□□□ 0.2
Scaf4-202ENSMUST00000163419 Kdm5dQ62240 1548 aa16.24■□□□□ 0.19
Scaf4-202ENSMUST00000163419 NeflP08551 543 aa16.2■□□□□ 0.18
Scaf4-202ENSMUST00000163419 Arhgap27A2AB59 869 aa16.17■□□□□ 0.18
Scaf4-202ENSMUST00000163419 Supt5hO55201 1082 aaKnown RBP16.17■□□□□ 0.18
Scaf4-202ENSMUST00000163419 Rsf1E9PWW9 1441 aaKnown RBP16.17■□□□□ 0.18
Scaf4-202ENSMUST00000163419 BlmO88700 1416 aa16.16■□□□□ 0.18
Scaf4-202ENSMUST00000163419 P3h3Q8CG70 732 aa16.15■□□□□ 0.18
Scaf4-202ENSMUST00000163419 CenpbP27790 599 aa16.15■□□□□ 0.18
Scaf4-202ENSMUST00000163419 Ercc6F8VPZ5 1481 aa16.09■□□□□ 0.17
Scaf4-202ENSMUST00000163419 Nlrp6Q91WS2 869 aa16.09■□□□□ 0.17
Scaf4-202ENSMUST00000163419 Cep164Q5DU05 1446 aa16.07■□□□□ 0.16
Scaf4-202ENSMUST00000163419 Setd5Q5XJV7 1441 aa16.07■□□□□ 0.16
Scaf4-202ENSMUST00000163419 Polr3glQ8R0C0 218 aa16.05■□□□□ 0.16
Scaf4-202ENSMUST00000163419 Crybg2B7ZCC2 1516 aa16.03■□□□□ 0.16
Scaf4-202ENSMUST00000163419 MyclP10166 368 aa16.02■□□□□ 0.16
Scaf4-202ENSMUST00000163419 Smarca2Q6DIC0 1577 aa16.02■□□□□ 0.15
Scaf4-202ENSMUST00000163419 Rangap1P46061 589 aaKnown RBP16.01■□□□□ 0.15
Scaf4-202ENSMUST00000163419 Arid3cA6PWV5 409 aa15.97■□□□□ 0.15
Scaf4-202ENSMUST00000163419 Hdac5Q9Z2V6 1113 aa15.97■□□□□ 0.15
Scaf4-202ENSMUST00000163419 Clstn2Q9ER65 966 aa15.95■□□□□ 0.14
Scaf4-202ENSMUST00000163419 Ccdc18Q640L5 1455 aa15.94■□□□□ 0.14
Scaf4-202ENSMUST00000163419 Amer1Q7TS75 1132 aa15.94■□□□□ 0.14
Scaf4-202ENSMUST00000163419 Ppp1r18Q8BQ30 594 aa15.92■□□□□ 0.14
Scaf4-202ENSMUST00000163419 Rgl3Q3UYI5 709 aa15.91■□□□□ 0.14
Scaf4-202ENSMUST00000163419 Golga3P55937 1487 aa15.91■□□□□ 0.14
Scaf4-202ENSMUST00000163419 Ccer2J3QPU5 274 aa15.9■□□□□ 0.14
Scaf4-202ENSMUST00000163419 Kdm2aP59997 1161 aa15.9■□□□□ 0.14
Scaf4-202ENSMUST00000163419 Tnnt3Q9QZ47 272 aa15.89■□□□□ 0.13
Retrieved 100 of 22,080 RNA–protein pairs in 38.9 ms