Protein–RNA interactions for Protein: Q8CGP0

Hist3h2bb, Histone H2B type 3-B, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist3h2bbQ8CGP0 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Hist3h2bbQ8CGP0 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Hist3h2bbQ8CGP0 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Hist3h2bbQ8CGP0 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC25.36■■□□□ 1.65
Hist3h2bbQ8CGP0 Psd-208ENSMUST00000224556 2034 ntBASIC25.2■■□□□ 1.63
Hist3h2bbQ8CGP0 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Hist3h2bbQ8CGP0 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Hist3h2bbQ8CGP0 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.45
Hist3h2bbQ8CGP0 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC24■■□□□ 1.43
Hist3h2bbQ8CGP0 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Hist3h2bbQ8CGP0 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Hist3h2bbQ8CGP0 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Hist3h2bbQ8CGP0 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Hist3h2bbQ8CGP0 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Hist3h2bbQ8CGP0 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Hist3h2bbQ8CGP0 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Hist3h2bbQ8CGP0 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
Hist3h2bbQ8CGP0 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Hist3h2bbQ8CGP0 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC23.45■■□□□ 1.35
Hist3h2bbQ8CGP0 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Hist3h2bbQ8CGP0 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Hist3h2bbQ8CGP0 Gm42596-201ENSMUST00000196305 1958 ntBASIC23.33■■□□□ 1.33
Hist3h2bbQ8CGP0 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Hist3h2bbQ8CGP0 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Hist3h2bbQ8CGP0 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC22.96■■□□□ 1.27
Hist3h2bbQ8CGP0 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Hist3h2bbQ8CGP0 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC22.85■■□□□ 1.25
Hist3h2bbQ8CGP0 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC22.84■■□□□ 1.25
Hist3h2bbQ8CGP0 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
Hist3h2bbQ8CGP0 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC22.55■■□□□ 1.2
Hist3h2bbQ8CGP0 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
Hist3h2bbQ8CGP0 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Hist3h2bbQ8CGP0 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
Hist3h2bbQ8CGP0 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Hist3h2bbQ8CGP0 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Hist3h2bbQ8CGP0 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Hist3h2bbQ8CGP0 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
Hist3h2bbQ8CGP0 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Hist3h2bbQ8CGP0 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Hist3h2bbQ8CGP0 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Hist3h2bbQ8CGP0 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
Hist3h2bbQ8CGP0 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Hist3h2bbQ8CGP0 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC22.19■■□□□ 1.14
Hist3h2bbQ8CGP0 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC22.17■■□□□ 1.14
Hist3h2bbQ8CGP0 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Hist3h2bbQ8CGP0 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Hist3h2bbQ8CGP0 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Hist3h2bbQ8CGP0 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC21.99■■□□□ 1.11
Hist3h2bbQ8CGP0 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Hist3h2bbQ8CGP0 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Hist3h2bbQ8CGP0 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Hist3h2bbQ8CGP0 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Hist3h2bbQ8CGP0 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC21.93■■□□□ 1.1
Hist3h2bbQ8CGP0 Gm10524-201ENSMUST00000181931 1893 ntBASIC21.92■■□□□ 1.1
Hist3h2bbQ8CGP0 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC21.91■■□□□ 1.1
Hist3h2bbQ8CGP0 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Hist3h2bbQ8CGP0 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
Hist3h2bbQ8CGP0 Zxda-201ENSMUST00000117281 2621 ntBASIC21.78■■□□□ 1.08
Hist3h2bbQ8CGP0 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Hist3h2bbQ8CGP0 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Hist3h2bbQ8CGP0 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Hist3h2bbQ8CGP0 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Hist3h2bbQ8CGP0 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
Hist3h2bbQ8CGP0 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
Hist3h2bbQ8CGP0 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Hist3h2bbQ8CGP0 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Hist3h2bbQ8CGP0 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Hist3h2bbQ8CGP0 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Hist3h2bbQ8CGP0 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC21.5■■□□□ 1.03
Hist3h2bbQ8CGP0 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Hist3h2bbQ8CGP0 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
Hist3h2bbQ8CGP0 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Hist3h2bbQ8CGP0 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Hist3h2bbQ8CGP0 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Hist3h2bbQ8CGP0 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Hist3h2bbQ8CGP0 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Hist3h2bbQ8CGP0 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Hist3h2bbQ8CGP0 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Hist3h2bbQ8CGP0 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Hist3h2bbQ8CGP0 AC153504.1-201ENSMUST00000218379 2290 ntBASIC21.31■■□□□ 1
Hist3h2bbQ8CGP0 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC21.31■■□□□ 1
Hist3h2bbQ8CGP0 Gm25239-201ENSMUST00000174915 86 ntBASIC21.3■■□□□ 1
Hist3h2bbQ8CGP0 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC21.28■■□□□ 1
Hist3h2bbQ8CGP0 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Hist3h2bbQ8CGP0 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Hist3h2bbQ8CGP0 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Hist3h2bbQ8CGP0 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Hist3h2bbQ8CGP0 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Hist3h2bbQ8CGP0 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Hist3h2bbQ8CGP0 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Hist3h2bbQ8CGP0 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Hist3h2bbQ8CGP0 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Hist3h2bbQ8CGP0 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Hist3h2bbQ8CGP0 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Hist3h2bbQ8CGP0 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Hist3h2bbQ8CGP0 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Hist3h2bbQ8CGP0 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Hist3h2bbQ8CGP0 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Hist3h2bbQ8CGP0 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC21.04■□□□□ 0.96
Hist3h2bbQ8CGP0 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 67 ms