Protein–RNA interactions for Protein: Q8CGP1

Hist1h2bk, Histone H2B type 1-K, mousemouse

Known RBP Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h2bkQ8CGP1 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Hist1h2bkQ8CGP1 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Hist1h2bkQ8CGP1 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Hist1h2bkQ8CGP1 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC25.2■■□□□ 1.62
Hist1h2bkQ8CGP1 Psd-208ENSMUST00000224556 2034 ntBASIC25.03■■□□□ 1.6
Hist1h2bkQ8CGP1 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Hist1h2bkQ8CGP1 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Hist1h2bkQ8CGP1 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
Hist1h2bkQ8CGP1 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
Hist1h2bkQ8CGP1 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Hist1h2bkQ8CGP1 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Hist1h2bkQ8CGP1 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Hist1h2bkQ8CGP1 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Hist1h2bkQ8CGP1 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC23.54■■□□□ 1.36
Hist1h2bkQ8CGP1 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
Hist1h2bkQ8CGP1 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
Hist1h2bkQ8CGP1 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Hist1h2bkQ8CGP1 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Hist1h2bkQ8CGP1 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Hist1h2bkQ8CGP1 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Hist1h2bkQ8CGP1 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Hist1h2bkQ8CGP1 Gm42596-201ENSMUST00000196305 1958 ntBASIC23.16■■□□□ 1.3
Hist1h2bkQ8CGP1 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Hist1h2bkQ8CGP1 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Hist1h2bkQ8CGP1 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC22.82■■□□□ 1.24
Hist1h2bkQ8CGP1 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Hist1h2bkQ8CGP1 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC22.68■■□□□ 1.22
Hist1h2bkQ8CGP1 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC22.68■■□□□ 1.22
Hist1h2bkQ8CGP1 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
Hist1h2bkQ8CGP1 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC22.41■■□□□ 1.18
Hist1h2bkQ8CGP1 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
Hist1h2bkQ8CGP1 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Hist1h2bkQ8CGP1 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.16
Hist1h2bkQ8CGP1 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Hist1h2bkQ8CGP1 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Hist1h2bkQ8CGP1 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Hist1h2bkQ8CGP1 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Hist1h2bkQ8CGP1 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
Hist1h2bkQ8CGP1 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Hist1h2bkQ8CGP1 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
Hist1h2bkQ8CGP1 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Hist1h2bkQ8CGP1 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC22.08■■□□□ 1.13
Hist1h2bkQ8CGP1 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC22.04■■□□□ 1.12
Hist1h2bkQ8CGP1 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC22.04■■□□□ 1.12
Hist1h2bkQ8CGP1 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Hist1h2bkQ8CGP1 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Hist1h2bkQ8CGP1 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC21.89■■□□□ 1.1
Hist1h2bkQ8CGP1 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Hist1h2bkQ8CGP1 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC21.88■■□□□ 1.09
Hist1h2bkQ8CGP1 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Hist1h2bkQ8CGP1 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Hist1h2bkQ8CGP1 Gm10524-201ENSMUST00000181931 1893 ntBASIC21.79■■□□□ 1.08
Hist1h2bkQ8CGP1 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Hist1h2bkQ8CGP1 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Hist1h2bkQ8CGP1 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC21.77■■□□□ 1.08
Hist1h2bkQ8CGP1 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Hist1h2bkQ8CGP1 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Hist1h2bkQ8CGP1 Zxda-201ENSMUST00000117281 2621 ntBASIC21.66■■□□□ 1.06
Hist1h2bkQ8CGP1 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Hist1h2bkQ8CGP1 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Hist1h2bkQ8CGP1 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Hist1h2bkQ8CGP1 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
Hist1h2bkQ8CGP1 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Hist1h2bkQ8CGP1 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Hist1h2bkQ8CGP1 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Hist1h2bkQ8CGP1 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Hist1h2bkQ8CGP1 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Hist1h2bkQ8CGP1 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Hist1h2bkQ8CGP1 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC21.35■■□□□ 1.01
Hist1h2bkQ8CGP1 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
Hist1h2bkQ8CGP1 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Hist1h2bkQ8CGP1 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC21.32■■□□□ 1
Hist1h2bkQ8CGP1 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Hist1h2bkQ8CGP1 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC21.29■■□□□ 1
Hist1h2bkQ8CGP1 Gm25239-201ENSMUST00000174915 86 ntBASIC21.27■■□□□ 1
Hist1h2bkQ8CGP1 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC21.27■■□□□ 1
Hist1h2bkQ8CGP1 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Hist1h2bkQ8CGP1 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Hist1h2bkQ8CGP1 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Hist1h2bkQ8CGP1 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC21.19■□□□□ 0.98
Hist1h2bkQ8CGP1 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Hist1h2bkQ8CGP1 AC153504.1-201ENSMUST00000218379 2290 ntBASIC21.17■□□□□ 0.98
Hist1h2bkQ8CGP1 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Hist1h2bkQ8CGP1 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Hist1h2bkQ8CGP1 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Hist1h2bkQ8CGP1 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Hist1h2bkQ8CGP1 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Hist1h2bkQ8CGP1 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Hist1h2bkQ8CGP1 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Hist1h2bkQ8CGP1 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Hist1h2bkQ8CGP1 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Hist1h2bkQ8CGP1 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Hist1h2bkQ8CGP1 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Hist1h2bkQ8CGP1 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Hist1h2bkQ8CGP1 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Hist1h2bkQ8CGP1 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Hist1h2bkQ8CGP1 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hist1h2bkQ8CGP1 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC20.93■□□□□ 0.94
Hist1h2bkQ8CGP1 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hist1h2bkQ8CGP1 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms