RNA–Protein interactions for RNA: ENSMUST00000047207.6

Ccdc27-201, Transcript of Coiled-coil domain-containing protein 27, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc27, Length 2,089 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc27-201ENSMUST00000047207 Ighv1-81A0A075B5Y4 117 aa10.87□□□□□ -0.67
Ccdc27-201ENSMUST00000047207 Umad1E0CX23 159 aa10.87□□□□□ -0.67
Ccdc27-201ENSMUST00000047207 RpeQ8VEE0 228 aa10.87□□□□□ -0.67
Ccdc27-201ENSMUST00000047207 Asxl3Q8C4A5 2259 aa10.87□□□□□ -0.67
Ccdc27-201ENSMUST00000047207 CrygbP04344 175 aa10.86□□□□□ -0.67
Ccdc27-201ENSMUST00000047207 Cdx4Q07424 282 aa10.86□□□□□ -0.67
Ccdc27-201ENSMUST00000047207 Gm10277Q6R5C6 214 aa10.86□□□□□ -0.67
Ccdc27-201ENSMUST00000047207 Gm10295Q8CCF3 114 aa10.86□□□□□ -0.67
Ccdc27-201ENSMUST00000047207 Celsr3Q91ZI0 3301 aa10.86□□□□□ -0.67
Ccdc27-201ENSMUST00000047207 Ighv4-1A0A075B5R5 116 aa10.86□□□□□ -0.67
Ccdc27-201ENSMUST00000047207 Onecut1O08755 465 aa10.86□□□□□ -0.67
Ccdc27-201ENSMUST00000047207 Runx1Q03347 451 aa10.86□□□□□ -0.67
Ccdc27-201ENSMUST00000047207 SvipQ3UZP4 77 aa10.86□□□□□ -0.67
Ccdc27-201ENSMUST00000047207 Sh3bgrl2Q8BG73 107 aa10.86□□□□□ -0.67
Ccdc27-201ENSMUST00000047207 Gm5105Q8C6Y9 112 aa10.86□□□□□ -0.67
Ccdc27-201ENSMUST00000047207 8030423J24RikQ9CX45 142 aa10.86□□□□□ -0.67
Ccdc27-201ENSMUST00000047207 Cacna1aP97445 2368 aa10.85□□□□□ -0.67
Ccdc27-201ENSMUST00000047207 Ighv1-53A0A075B5W3 117 aa10.85□□□□□ -0.67
Ccdc27-201ENSMUST00000047207 A730046J19RikA0A1B0GSN8 89 aa10.85□□□□□ -0.67
Ccdc27-201ENSMUST00000047207 P01837 106 aa10.85□□□□□ -0.67
Ccdc27-201ENSMUST00000047207 Dtx1Q61010 627 aa10.85□□□□□ -0.67
Ccdc27-201ENSMUST00000047207 Mustn1Q99JI1 82 aa10.85□□□□□ -0.67
Ccdc27-201ENSMUST00000047207 Igkv4-90A0A075B5L3 117 aa10.85□□□□□ -0.67
Ccdc27-201ENSMUST00000047207 Mrps21P58059 87 aa10.85□□□□□ -0.67
Ccdc27-201ENSMUST00000047207 Hif1anQ8BLR9 349 aa10.85□□□□□ -0.67
Ccdc27-201ENSMUST00000047207 Ormdl2Q9CQZ0 153 aa10.85□□□□□ -0.67
Ccdc27-201ENSMUST00000047207 Gm12845A0A0N4SUM5 588 aa10.84□□□□□ -0.67
Ccdc27-201ENSMUST00000047207 Gosr1O88630 250 aa10.84□□□□□ -0.67
Ccdc27-201ENSMUST00000047207 NdpP48744 131 aa10.84□□□□□ -0.67
Ccdc27-201ENSMUST00000047207 Ighv8-5A0A0A6YY60 119 aa10.83□□□□□ -0.68
Ccdc27-201ENSMUST00000047207 Ins1P01325 108 aa10.83□□□□□ -0.68
Ccdc27-201ENSMUST00000047207 Fxyd7P59648 80 aa10.83□□□□□ -0.68
Ccdc27-201ENSMUST00000047207 Ndufa4Q62425 82 aaKnown RBP10.83□□□□□ -0.68
Ccdc27-201ENSMUST00000047207 Lypd8Q9D7S0 255 aa10.83□□□□□ -0.68
Ccdc27-201ENSMUST00000047207 AcanQ61282 2132 aaKnown RBP10.83□□□□□ -0.68
Ccdc27-201ENSMUST00000047207 CadB2RQC6 2225 aa10.83□□□□□ -0.68
Ccdc27-201ENSMUST00000047207 Gm28269A0A087WSG3 125 aa10.83□□□□□ -0.68
Ccdc27-201ENSMUST00000047207 Igkv4-59A0A0B4J1I8 117 aa10.83□□□□□ -0.68
Ccdc27-201ENSMUST00000047207 Gm45785A0A1B0GT05 94 aa10.83□□□□□ -0.68
Ccdc27-201ENSMUST00000047207 D930048N14RikA2AA67 225 aa10.83□□□□□ -0.68
Ccdc27-201ENSMUST00000047207 Sdhaf1Q3U276 118 aa10.83□□□□□ -0.68
Ccdc27-201ENSMUST00000047207 Cdip1Q9DB75 208 aa10.83□□□□□ -0.68
Ccdc27-201ENSMUST00000047207 Pgpep1Q9ESW8 209 aa10.83□□□□□ -0.68
Ccdc27-201ENSMUST00000047207 Bub3Q9WVA3 326 aa10.83□□□□□ -0.68
Ccdc27-201ENSMUST00000047207 Vps13cQ8BX70 3748 aa10.82□□□□□ -0.68
Ccdc27-201ENSMUST00000047207 Igkv4-71A0A0G2JEH0 117 aa10.82□□□□□ -0.68
Ccdc27-201ENSMUST00000047207 Tmem95P0DJF3 176 aa10.82□□□□□ -0.68
Ccdc27-201ENSMUST00000047207 P18527 97 aa10.82□□□□□ -0.68
Ccdc27-201ENSMUST00000047207 Ube2d1P61080 147 aaKnown RBP10.82□□□□□ -0.68
Ccdc27-201ENSMUST00000047207 Gm12888Q3UW77 119 aa10.82□□□□□ -0.68
Ccdc27-201ENSMUST00000047207 A130051J06RikQ8CAU1 227 aa10.82□□□□□ -0.68
Ccdc27-201ENSMUST00000047207 PoleQ9WVF7 2283 aa10.82□□□□□ -0.68
Ccdc27-201ENSMUST00000047207 Gm45753A0A1C7CYU8 86 aa10.81□□□□□ -0.68
Ccdc27-201ENSMUST00000047207 Cks1brtQ3UNC9 96 aa10.81□□□□□ -0.68
Ccdc27-201ENSMUST00000047207 Spink2Q8BMY7 86 aa10.81□□□□□ -0.68
Ccdc27-201ENSMUST00000047207 Tmem14cQ9CQN6 114 aa10.81□□□□□ -0.68
Ccdc27-201ENSMUST00000047207 Med12A2AGH6 2190 aa10.81□□□□□ -0.68
Ccdc27-201ENSMUST00000047207 Cacna1hO88427 2365 aa10.81□□□□□ -0.68
Ccdc27-201ENSMUST00000047207 Ighv1-22A0A075B5U7 117 aa10.81□□□□□ -0.68
Ccdc27-201ENSMUST00000047207 CntfrO88507 372 aa10.81□□□□□ -0.68
Ccdc27-201ENSMUST00000047207 P01812 117 aa10.81□□□□□ -0.68
Ccdc27-201ENSMUST00000047207 Defa3P28310 93 aa10.81□□□□□ -0.68
Ccdc27-201ENSMUST00000047207 Defa10P50708 93 aa10.81□□□□□ -0.68
Ccdc27-201ENSMUST00000047207 Defa15P50713 93 aa10.81□□□□□ -0.68
Ccdc27-201ENSMUST00000047207 Cfc1P97766 202 aa10.81□□□□□ -0.68
Ccdc27-201ENSMUST00000047207 Plac1Q9JI83 173 aa10.81□□□□□ -0.68
Ccdc27-201ENSMUST00000047207 Ighv12-3A0A075B5T1 117 aa10.8□□□□□ -0.68
Ccdc27-201ENSMUST00000047207 Ighv3-4A0A0A6YXF1 117 aa10.8□□□□□ -0.68
Ccdc27-201ENSMUST00000047207 Brd3osA0A1B0GRB6 84 aa10.8□□□□□ -0.68
Ccdc27-201ENSMUST00000047207 Svs5P30933 122 aa10.8□□□□□ -0.68
Ccdc27-201ENSMUST00000047207 Olfr312Q7TRZ9 308 aa10.8□□□□□ -0.68
Ccdc27-201ENSMUST00000047207 Mrpl16Q99N93 251 aa10.8□□□□□ -0.68
Ccdc27-201ENSMUST00000047207 Ighv3-1A0A075B5S6 116 aa10.8□□□□□ -0.68
Ccdc27-201ENSMUST00000047207 Gm44965A0A0N4SVR3 59 aa10.8□□□□□ -0.68
Ccdc27-201ENSMUST00000047207 Fam240aJ3QNP9 97 aa10.8□□□□□ -0.68
Ccdc27-201ENSMUST00000047207 P01725 110 aa10.8□□□□□ -0.68
Ccdc27-201ENSMUST00000047207 Ube2d3P61079 147 aa10.8□□□□□ -0.68
Ccdc27-201ENSMUST00000047207 Ube2d2P62838 147 aa10.8□□□□□ -0.68
Ccdc27-201ENSMUST00000047207 Spata46Q4FZF2 204 aa10.8□□□□□ -0.68
Ccdc27-201ENSMUST00000047207 Klhdc1Q80YG3 406 aa10.8□□□□□ -0.68
Ccdc27-201ENSMUST00000047207 Gm4763Q8CFJ5 196 aa10.8□□□□□ -0.68
Ccdc27-201ENSMUST00000047207 Pradc1Q9D9N8 188 aa10.8□□□□□ -0.68
Ccdc27-201ENSMUST00000047207 Igkv4-81A0A0G2JEY5 119 aa10.79□□□□□ -0.68
Ccdc27-201ENSMUST00000047207 1700056E22RikF7CNM6 234 aa10.79□□□□□ -0.68
Ccdc27-201ENSMUST00000047207 BokO35425 213 aa10.79□□□□□ -0.68
Ccdc27-201ENSMUST00000047207 Sumo2P61957 95 aaKnown RBP10.79□□□□□ -0.68
Ccdc27-201ENSMUST00000047207 NrepQ07475 68 aa10.79□□□□□ -0.68
Ccdc27-201ENSMUST00000047207 Trav7-2Q5R1I3 112 aa10.79□□□□□ -0.68
Ccdc27-201ENSMUST00000047207 Minos1Q7TNS2 76 aa10.79□□□□□ -0.68
Ccdc27-201ENSMUST00000047207 Q9CX25 107 aa10.79□□□□□ -0.68
Ccdc27-201ENSMUST00000047207 Shank1D3YZU1 2167 aa10.78□□□□□ -0.68
Ccdc27-201ENSMUST00000047207 Gm20481G3UXK4 153 aa10.78□□□□□ -0.68
Ccdc27-201ENSMUST00000047207 Tcrg-C3L7N479 172 aa10.78□□□□□ -0.68
Ccdc27-201ENSMUST00000047207 P03985 172 aa10.78□□□□□ -0.68
Ccdc27-201ENSMUST00000047207 MdfiP70331 251 aa10.78□□□□□ -0.68
Ccdc27-201ENSMUST00000047207 Prss41Q920S2 322 aa10.78□□□□□ -0.68
Ccdc27-201ENSMUST00000047207 Tspan13Q9D8C2 204 aa10.78□□□□□ -0.68
Ccdc27-201ENSMUST00000047207 Nit2Q9JHW2 276 aa10.78□□□□□ -0.68
Ccdc27-201ENSMUST00000047207 Trav4n-4A0A075B615 110 aa10.78□□□□□ -0.68
Ccdc27-201ENSMUST00000047207 Lgals6O54891 301 aa10.78□□□□□ -0.68
Retrieved 100 of 22,080 RNA–protein pairs in 49.4 ms