RNA–Protein interactions for RNA: ENSMUST00000047207.6

Ccdc27-201, Transcript of Coiled-coil domain-containing protein 27, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc27, Length 2,089 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc27-201ENSMUST00000047207 NischQ80TM9 1593 aa25.71■■□□□ 1.71
Ccdc27-201ENSMUST00000047207 Gm35339A0A140LHH9 1649 aa25.15■■□□□ 1.62
Ccdc27-201ENSMUST00000047207 Abcc9P70170 1546 aa25.07■■□□□ 1.6
Ccdc27-201ENSMUST00000047207 Rtl1Q7M732 1744 aa24.83■■□□□ 1.57
Ccdc27-201ENSMUST00000047207 Ccdc180J3QNE4 1664 aa24.43■■□□□ 1.5
Ccdc27-201ENSMUST00000047207 Abcc8B2RUS7 1588 aa24.28■■□□□ 1.48
Ccdc27-201ENSMUST00000047207 Rpgrip1Q9EPQ2 1331 aa24.26■■□□□ 1.47
Ccdc27-201ENSMUST00000047207 Rhox8Q6VSS7 320 aa24.17■■□□□ 1.46
Ccdc27-201ENSMUST00000047207 Zcchc6Q5BLK4 1491 aaKnown RBP23.63■■□□□ 1.37
Ccdc27-201ENSMUST00000047207 Acin1Q9JIX8 1338 aaKnown RBP23.47■■□□□ 1.35
Ccdc27-201ENSMUST00000047207 Dcaf1Q80TR8 1506 aa23.15■■□□□ 1.3
Ccdc27-201ENSMUST00000047207 HrcG5E8J6 738 aa23.12■■□□□ 1.29
Ccdc27-201ENSMUST00000047207 Pcgf6Q99NA9 353 aa22.77■■□□□ 1.23
Ccdc27-201ENSMUST00000047207 Ehmt2Q9Z148 1263 aaKnown RBP22.64■■□□□ 1.21
Ccdc27-201ENSMUST00000047207 Rb1cc1Q9ESK9 1588 aa22.57■■□□□ 1.2
Ccdc27-201ENSMUST00000047207 Trim41Q5NCC3 630 aa22.4■■□□□ 1.18
Ccdc27-201ENSMUST00000047207 Baz1aO88379 1555 aa22.38■■□□□ 1.17
Ccdc27-201ENSMUST00000047207 Ccdc136Q3TVA9 1136 aa22.31■■□□□ 1.16
Ccdc27-201ENSMUST00000047207 ScribQ80U72 1612 aa22.3■■□□□ 1.16
Ccdc27-201ENSMUST00000047207 Cep164Q5DU05 1446 aa22.23■■□□□ 1.15
Ccdc27-201ENSMUST00000047207 Supt5hO55201 1082 aaKnown RBP22.15■■□□□ 1.14
Ccdc27-201ENSMUST00000047207 Kdm5dQ62240 1548 aa22.01■■□□□ 1.11
Ccdc27-201ENSMUST00000047207 Crybg2B7ZCC2 1516 aa21.95■■□□□ 1.1
Ccdc27-201ENSMUST00000047207 Smarca2Q6DIC0 1577 aa21.94■■□□□ 1.1
Ccdc27-201ENSMUST00000047207 Neurod1Q60867 357 aa21.87■■□□□ 1.09
Ccdc27-201ENSMUST00000047207 NacadQ5SWP3 1504 aa21.8■■□□□ 1.08
Ccdc27-201ENSMUST00000047207 NefmP08553 848 aa21.79■■□□□ 1.08
Ccdc27-201ENSMUST00000047207 Las1lA2BE28 776 aaKnown RBP21.75■■□□□ 1.07
Ccdc27-201ENSMUST00000047207 Rsf1E9PWW9 1441 aaKnown RBP21.61■■□□□ 1.05
Ccdc27-201ENSMUST00000047207 Zeb1Q64318 1117 aa21.54■■□□□ 1.04
Ccdc27-201ENSMUST00000047207 Mier1Q5UAK0 511 aa21.51■■□□□ 1.03
Ccdc27-201ENSMUST00000047207 Cngb1E1AZ71 1325 aa21.48■■□□□ 1.03
Ccdc27-201ENSMUST00000047207 Chic1Q8CBW7 227 aa21.48■■□□□ 1.03
Ccdc27-201ENSMUST00000047207 Anks4bQ8K3X6 423 aa21.46■■□□□ 1.03
Ccdc27-201ENSMUST00000047207 Sall2Q9QX96 1004 aa21.46■■□□□ 1.03
Ccdc27-201ENSMUST00000047207 Brd4Q9ESU6 1400 aaKnown RBP21.41■■□□□ 1.02
Ccdc27-201ENSMUST00000047207 Golga3P55937 1487 aa21.38■■□□□ 1.01
Ccdc27-201ENSMUST00000047207 Ccdc88bQ4QRL3 1481 aa21.36■■□□□ 1.01
Ccdc27-201ENSMUST00000047207 Gab3Q8BSM5 595 aa21.33■■□□□ 1
Ccdc27-201ENSMUST00000047207 Sycp2Q9CUU3 1500 aa21.3■■□□□ 1
Ccdc27-201ENSMUST00000047207 1700123L14RikQ3V2K7 440 aa21.25■□□□□ 0.99
Ccdc27-201ENSMUST00000047207 Myt1Q8CFC2 1127 aa21.15■□□□□ 0.98
Ccdc27-201ENSMUST00000047207 Synj1Q8CHC4 1574 aa21.14■□□□□ 0.97
Ccdc27-201ENSMUST00000047207 Csrnp3P59055 597 aa21.12■□□□□ 0.97
Ccdc27-201ENSMUST00000047207 Top2bQ64511 1612 aa21.12■□□□□ 0.97
Ccdc27-201ENSMUST00000047207 Cecr2E9Q2Z1 1453 aa21.11■□□□□ 0.97
Ccdc27-201ENSMUST00000047207 Aplp2Q06335 707 aa21.08■□□□□ 0.97
Ccdc27-201ENSMUST00000047207 ClspnQ80YR7 1315 aa21.06■□□□□ 0.96
Ccdc27-201ENSMUST00000047207 Cdk11bP24788 784 aaKnown RBP21.03■□□□□ 0.96
Ccdc27-201ENSMUST00000047207 Aebp2Q9Z248 504 aaKnown RBP20.98■□□□□ 0.95
Ccdc27-201ENSMUST00000047207 Rapgef2Q8CHG7 1496 aa20.97■□□□□ 0.95
Ccdc27-201ENSMUST00000047207 Wdr66E9Q743 1299 aa20.95■□□□□ 0.94
Ccdc27-201ENSMUST00000047207 Nop58Q6DFW4 536 aaKnown RBP20.95■□□□□ 0.94
Ccdc27-201ENSMUST00000047207 CftrP26361 1476 aa20.94■□□□□ 0.94
Ccdc27-201ENSMUST00000047207 CenpbP27790 599 aa20.93■□□□□ 0.94
Ccdc27-201ENSMUST00000047207 Cttnbp2B9EJA2 1648 aa20.86■□□□□ 0.93
Ccdc27-201ENSMUST00000047207 UbtfP25976 765 aaKnown RBP20.85■□□□□ 0.93
Ccdc27-201ENSMUST00000047207 Cc2d2aQ8CFW7 1633 aa20.79■□□□□ 0.92
Ccdc27-201ENSMUST00000047207 Top2aQ01320 1528 aaKnown RBP20.75■□□□□ 0.91
Ccdc27-201ENSMUST00000047207 TonslQ6NZL6 1363 aa20.75■□□□□ 0.91
Ccdc27-201ENSMUST00000047207 Esf1Q3V1V3 845 aaKnown RBP20.74■□□□□ 0.91
Ccdc27-201ENSMUST00000047207 Cep162Q6ZQ06 1403 aa20.73■□□□□ 0.91
Ccdc27-201ENSMUST00000047207 Fmn1Q05860 1466 aa20.73■□□□□ 0.91
Ccdc27-201ENSMUST00000047207 BicraF8VPZ9 1578 aa20.72■□□□□ 0.91
Ccdc27-201ENSMUST00000047207 Ncapd3Q6ZQK0 1506 aa20.63■□□□□ 0.89
Ccdc27-201ENSMUST00000047207 Eif4g1Q6NZJ6 1600 aaKnown RBP20.59■□□□□ 0.89
Ccdc27-201ENSMUST00000047207 Smarca4Q3TKT4 1613 aaKnown RBP20.52■□□□□ 0.88
Ccdc27-201ENSMUST00000047207 Clip1Q922J3 1391 aa20.48■□□□□ 0.87
Ccdc27-201ENSMUST00000047207 Tnnt3Q9QZ47 272 aa20.47■□□□□ 0.87
Ccdc27-201ENSMUST00000047207 Ppargc1bQ8VHJ7 1014 aa20.46■□□□□ 0.87
Ccdc27-201ENSMUST00000047207 Myt1lP97500 1187 aa20.41■□□□□ 0.86
Ccdc27-201ENSMUST00000047207 Kdm5bQ80Y84 1544 aa20.38■□□□□ 0.85
Ccdc27-201ENSMUST00000047207 Gm38655A0A286YDK6 273 aa20.34■□□□□ 0.85
Ccdc27-201ENSMUST00000047207 Plekhg3Q4VAC9 1341 aa20.31■□□□□ 0.84
Ccdc27-201ENSMUST00000047207 Npm2Q80W85 207 aa20.28■□□□□ 0.84
Ccdc27-201ENSMUST00000047207 TchhA0A0B4J1F9 1599 aa20.25■□□□□ 0.83
Ccdc27-201ENSMUST00000047207 Hnrnpul2Q00PI9 745 aaKnown RBP20.25■□□□□ 0.83
Ccdc27-201ENSMUST00000047207 TnnQ80Z71 1560 aa20.24■□□□□ 0.83
Ccdc27-201ENSMUST00000047207 Ccdc18Q640L5 1455 aa20.24■□□□□ 0.83
Ccdc27-201ENSMUST00000047207 Arhgap35Q91YM2 1499 aa20.22■□□□□ 0.83
Ccdc27-201ENSMUST00000047207 Fam71e1A1L3C1 212 aa20.2■□□□□ 0.82
Ccdc27-201ENSMUST00000047207 Arap1Q4LDD4 1452 aa20.19■□□□□ 0.82
Ccdc27-201ENSMUST00000047207 Eea1Q8BL66 1411 aa20.19■□□□□ 0.82
Ccdc27-201ENSMUST00000047207 Arhgef5E9Q7D5 1581 aa20.19■□□□□ 0.82
Ccdc27-201ENSMUST00000047207 NrkQ9R0G8 1455 aa20.17■□□□□ 0.82
Ccdc27-201ENSMUST00000047207 Iqgap2Q3UQ44 1575 aa20.14■□□□□ 0.81
Ccdc27-201ENSMUST00000047207 Baz1bQ9Z277 1479 aa20.12■□□□□ 0.81
Ccdc27-201ENSMUST00000047207 Stra8P70278 393 aa20.11■□□□□ 0.81
Ccdc27-201ENSMUST00000047207 SafbD3YXK2 937 aaKnown RBP20.11■□□□□ 0.81
Ccdc27-201ENSMUST00000047207 Rpap1Q80TE0 1409 aa20.08■□□□□ 0.81
Ccdc27-201ENSMUST00000047207 DiexfQ8BTT6 772 aaKnown RBP20.08■□□□□ 0.81
Ccdc27-201ENSMUST00000047207 Tiam1Q60610 1591 aa20.07■□□□□ 0.8
Ccdc27-201ENSMUST00000047207 Map3k1P53349 1493 aa20.06■□□□□ 0.8
Ccdc27-201ENSMUST00000047207 Znf710Q3U288 666 aa20.05■□□□□ 0.8
Ccdc27-201ENSMUST00000047207 Anp32aO35381 247 aa20.04■□□□□ 0.8
Ccdc27-201ENSMUST00000047207 Eid3Q3V124 375 aa20.01■□□□□ 0.79
Ccdc27-201ENSMUST00000047207 UacaQ8CGB3 1411 aa20.01■□□□□ 0.79
Ccdc27-201ENSMUST00000047207 Mapk8ip2Q9ERE9 830 aa20■□□□□ 0.79
Ccdc27-201ENSMUST00000047207 Setd5Q5XJV7 1441 aa20■□□□□ 0.79
Ccdc27-201ENSMUST00000047207 PtprkP35822 1457 aa19.99■□□□□ 0.79
Retrieved 100 of 22,080 RNA–protein pairs in 12.9 ms