Protein–RNA interactions for Protein: Q8BX70

Vps13c, Vacuolar protein sorting-associated protein 13C, mousemouse

Predictions only

Length 3,748 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13cQ8BX70 Gm25239-201ENSMUST00000174915 86 ntBASIC36,15■■■■□ 3,38
Vps13cQ8BX70 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC33,52■■■□□ 2,96
Vps13cQ8BX70 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC32,82■■■□□ 2,84
Vps13cQ8BX70 Gm24109-201ENSMUST00000175489 103 ntBASIC31,76■■■□□ 2,67
Vps13cQ8BX70 Gm15042-201ENSMUST00000120212 883 ntBASIC30,98■■■□□ 2,55
Vps13cQ8BX70 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC30,66■■■□□ 2,5
Vps13cQ8BX70 Gm15045-201ENSMUST00000117359 883 ntBASIC30,51■■■□□ 2,47
Vps13cQ8BX70 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC30,47■■■□□ 2,47
Vps13cQ8BX70 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC30,23■■■□□ 2,43
Vps13cQ8BX70 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC30,11■■■□□ 2,41
Vps13cQ8BX70 Gm23366-201ENSMUST00000175022 89 ntBASIC29,91■■■□□ 2,38
Vps13cQ8BX70 AC153911.1-202ENSMUST00000218534 1034 ntBASIC29,58■■■□□ 2,33
Vps13cQ8BX70 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC29,55■■■□□ 2,32
Vps13cQ8BX70 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC29,5■■■□□ 2,31
Vps13cQ8BX70 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC29,29■■■□□ 2,28
Vps13cQ8BX70 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC29,23■■■□□ 2,27
Vps13cQ8BX70 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC29,12■■■□□ 2,25
Vps13cQ8BX70 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC29,07■■■□□ 2,24
Vps13cQ8BX70 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC28,99■■■□□ 2,23
Vps13cQ8BX70 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC28,79■■■□□ 2,2
Vps13cQ8BX70 Gm25238-201ENSMUST00000174914 89 ntBASIC28,78■■■□□ 2,2
Vps13cQ8BX70 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC28,76■■■□□ 2,19
Vps13cQ8BX70 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC28,66■■■□□ 2,18
Vps13cQ8BX70 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC28,66■■■□□ 2,18
Vps13cQ8BX70 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC28,23■■■□□ 2,11
Vps13cQ8BX70 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC28,22■■■□□ 2,11
Vps13cQ8BX70 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC28,16■■■□□ 2,1
Vps13cQ8BX70 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC28,08■■■□□ 2,09
Vps13cQ8BX70 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC28,06■■■□□ 2,08
Vps13cQ8BX70 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC28,05■■■□□ 2,08
Vps13cQ8BX70 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC27,94■■■□□ 2,06
Vps13cQ8BX70 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC27,91■■■□□ 2,06
Vps13cQ8BX70 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC27,91■■■□□ 2,06
Vps13cQ8BX70 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC27,9■■■□□ 2,06
Vps13cQ8BX70 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC27,86■■■□□ 2,05
Vps13cQ8BX70 Gm25262-201ENSMUST00000174934 133 ntBASIC27,75■■■□□ 2,03
Vps13cQ8BX70 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC27,7■■■□□ 2,02
Vps13cQ8BX70 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC27,63■■■□□ 2,01
Vps13cQ8BX70 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC27,61■■■□□ 2,01
Vps13cQ8BX70 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC27,47■■□□□ 1,99
Vps13cQ8BX70 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC27,33■■□□□ 1,97
Vps13cQ8BX70 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC27,32■■□□□ 1,96
Vps13cQ8BX70 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC27,3■■□□□ 1,96
Vps13cQ8BX70 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC27,29■■□□□ 1,96
Vps13cQ8BX70 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC27,27■■□□□ 1,96
Vps13cQ8BX70 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC27,23■■□□□ 1,95
Vps13cQ8BX70 Gm27325-201ENSMUST00000175467 74 ntBASIC27,22■■□□□ 1,95
Vps13cQ8BX70 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC27,19■■□□□ 1,94
Vps13cQ8BX70 Gm26115-201ENSMUST00000175605 87 ntBASIC27,11■■□□□ 1,93
Vps13cQ8BX70 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC27,05■■□□□ 1,92
Vps13cQ8BX70 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC27,04■■□□□ 1,92
Vps13cQ8BX70 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC27,04■■□□□ 1,92
Vps13cQ8BX70 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC27,03■■□□□ 1,92
Vps13cQ8BX70 Psd-208ENSMUST00000224556 2034 ntBASIC27,02■■□□□ 1,92
Vps13cQ8BX70 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC26,97■■□□□ 1,91
Vps13cQ8BX70 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC26,92■■□□□ 1,9
Vps13cQ8BX70 Rab21-202ENSMUST00000218831 843 ntBASIC26,91■■□□□ 1,9
Vps13cQ8BX70 Gm8109-201ENSMUST00000194076 746 ntBASIC26,85■■□□□ 1,89
Vps13cQ8BX70 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC26,76■■□□□ 1,87
Vps13cQ8BX70 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC26,76■■□□□ 1,87
Vps13cQ8BX70 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC26,75■■□□□ 1,87
Vps13cQ8BX70 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC26,75■■□□□ 1,87
Vps13cQ8BX70 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC26,69■■□□□ 1,86
Vps13cQ8BX70 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC26,63■■□□□ 1,85
Vps13cQ8BX70 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC26,62■■□□□ 1,85
Vps13cQ8BX70 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC26,6■■□□□ 1,85
Vps13cQ8BX70 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC26,59■■□□□ 1,85
Vps13cQ8BX70 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC26,59■■□□□ 1,85
Vps13cQ8BX70 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC26,58■■□□□ 1,85
Vps13cQ8BX70 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC26,57■■□□□ 1,84
Vps13cQ8BX70 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC26,54■■□□□ 1,84
Vps13cQ8BX70 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC26,46■■□□□ 1,83
Vps13cQ8BX70 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC26,38■■□□□ 1,81
Vps13cQ8BX70 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC26,29■■□□□ 1,8
Vps13cQ8BX70 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC26,27■■□□□ 1,8
Vps13cQ8BX70 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC26,27■■□□□ 1,8
Vps13cQ8BX70 Gm24804-201ENSMUST00000174982 85 ntBASIC26,22■■□□□ 1,79
Vps13cQ8BX70 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC26,19■■□□□ 1,78
Vps13cQ8BX70 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC26,15■■□□□ 1,78
Vps13cQ8BX70 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC26,15■■□□□ 1,78
Vps13cQ8BX70 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC26,14■■□□□ 1,77
Vps13cQ8BX70 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC26,11■■□□□ 1,77
Vps13cQ8BX70 Gm17082-201ENSMUST00000166043 1091 ntBASIC26,11■■□□□ 1,77
Vps13cQ8BX70 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC26,1■■□□□ 1,77
Vps13cQ8BX70 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC26,04■■□□□ 1,76
Vps13cQ8BX70 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC26,04■■□□□ 1,76
Vps13cQ8BX70 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC26,02■■□□□ 1,76
Vps13cQ8BX70 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC25,98■■□□□ 1,75
Vps13cQ8BX70 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC25,95■■□□□ 1,74
Vps13cQ8BX70 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC25,92■■□□□ 1,74
Vps13cQ8BX70 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC25,88■■□□□ 1,73
Vps13cQ8BX70 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC25,87■■□□□ 1,73
Vps13cQ8BX70 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC25,86■■□□□ 1,73
Vps13cQ8BX70 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC25,86■■□□□ 1,73
Vps13cQ8BX70 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC25,85■■□□□ 1,73
Vps13cQ8BX70 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC25,85■■□□□ 1,73
Vps13cQ8BX70 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC25,84■■□□□ 1,73
Vps13cQ8BX70 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC25,84■■□□□ 1,73
Vps13cQ8BX70 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC25,8■■□□□ 1,72
Vps13cQ8BX70 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC25,79■■□□□ 1,72
Retrieved 100 of 76,532 protein–RNA pairs in 8,8 ms