Protein–RNA interactions for Protein: Q8BX70

Vps13c, Vacuolar protein sorting-associated protein 13C, mousemouse

Predictions only

Length 3,748 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13cQ8BX70 Gm25239-201ENSMUST00000174915 86 ntBASIC36.15■■■■□ 3.38
Vps13cQ8BX70 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC33.52■■■□□ 2.96
Vps13cQ8BX70 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC32.82■■■□□ 2.84
Vps13cQ8BX70 Gm24109-201ENSMUST00000175489 103 ntBASIC31.76■■■□□ 2.67
Vps13cQ8BX70 Gm15042-201ENSMUST00000120212 883 ntBASIC30.98■■■□□ 2.55
Vps13cQ8BX70 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC30.66■■■□□ 2.5
Vps13cQ8BX70 Gm15045-201ENSMUST00000117359 883 ntBASIC30.51■■■□□ 2.47
Vps13cQ8BX70 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
Vps13cQ8BX70 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
Vps13cQ8BX70 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
Vps13cQ8BX70 Gm23366-201ENSMUST00000175022 89 ntBASIC29.91■■■□□ 2.38
Vps13cQ8BX70 AC153911.1-202ENSMUST00000218534 1034 ntBASIC29.58■■■□□ 2.33
Vps13cQ8BX70 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
Vps13cQ8BX70 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC29.5■■■□□ 2.31
Vps13cQ8BX70 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
Vps13cQ8BX70 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC29.23■■■□□ 2.27
Vps13cQ8BX70 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
Vps13cQ8BX70 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
Vps13cQ8BX70 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
Vps13cQ8BX70 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC28.79■■■□□ 2.2
Vps13cQ8BX70 Gm25238-201ENSMUST00000174914 89 ntBASIC28.78■■■□□ 2.2
Vps13cQ8BX70 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
Vps13cQ8BX70 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC28.66■■■□□ 2.18
Vps13cQ8BX70 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
Vps13cQ8BX70 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC28.23■■■□□ 2.11
Vps13cQ8BX70 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC28.22■■■□□ 2.11
Vps13cQ8BX70 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC28.16■■■□□ 2.1
Vps13cQ8BX70 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC28.08■■■□□ 2.09
Vps13cQ8BX70 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Vps13cQ8BX70 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
Vps13cQ8BX70 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC27.94■■■□□ 2.06
Vps13cQ8BX70 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC27.91■■■□□ 2.06
Vps13cQ8BX70 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC27.91■■■□□ 2.06
Vps13cQ8BX70 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
Vps13cQ8BX70 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC27.86■■■□□ 2.05
Vps13cQ8BX70 Gm25262-201ENSMUST00000174934 133 ntBASIC27.75■■■□□ 2.03
Vps13cQ8BX70 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC27.7■■■□□ 2.02
Vps13cQ8BX70 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC27.63■■■□□ 2.01
Vps13cQ8BX70 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC27.61■■■□□ 2.01
Vps13cQ8BX70 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC27.47■■□□□ 1.99
Vps13cQ8BX70 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC27.33■■□□□ 1.97
Vps13cQ8BX70 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Vps13cQ8BX70 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC27.3■■□□□ 1.96
Vps13cQ8BX70 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC27.29■■□□□ 1.96
Vps13cQ8BX70 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC27.27■■□□□ 1.96
Vps13cQ8BX70 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Vps13cQ8BX70 Gm27325-201ENSMUST00000175467 74 ntBASIC27.22■■□□□ 1.95
Vps13cQ8BX70 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Vps13cQ8BX70 Gm26115-201ENSMUST00000175605 87 ntBASIC27.11■■□□□ 1.93
Vps13cQ8BX70 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC27.05■■□□□ 1.92
Vps13cQ8BX70 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Vps13cQ8BX70 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC27.04■■□□□ 1.92
Vps13cQ8BX70 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC27.03■■□□□ 1.92
Vps13cQ8BX70 Psd-208ENSMUST00000224556 2034 ntBASIC27.02■■□□□ 1.92
Vps13cQ8BX70 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Vps13cQ8BX70 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
Vps13cQ8BX70 Rab21-202ENSMUST00000218831 843 ntBASIC26.91■■□□□ 1.9
Vps13cQ8BX70 Gm8109-201ENSMUST00000194076 746 ntBASIC26.85■■□□□ 1.89
Vps13cQ8BX70 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC26.76■■□□□ 1.87
Vps13cQ8BX70 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC26.76■■□□□ 1.87
Vps13cQ8BX70 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
Vps13cQ8BX70 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC26.75■■□□□ 1.87
Vps13cQ8BX70 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
Vps13cQ8BX70 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC26.63■■□□□ 1.85
Vps13cQ8BX70 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC26.62■■□□□ 1.85
Vps13cQ8BX70 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Vps13cQ8BX70 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC26.59■■□□□ 1.85
Vps13cQ8BX70 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC26.59■■□□□ 1.85
Vps13cQ8BX70 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC26.58■■□□□ 1.85
Vps13cQ8BX70 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC26.57■■□□□ 1.84
Vps13cQ8BX70 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Vps13cQ8BX70 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC26.46■■□□□ 1.83
Vps13cQ8BX70 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
Vps13cQ8BX70 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Vps13cQ8BX70 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
Vps13cQ8BX70 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Vps13cQ8BX70 Gm24804-201ENSMUST00000174982 85 ntBASIC26.22■■□□□ 1.79
Vps13cQ8BX70 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC26.19■■□□□ 1.78
Vps13cQ8BX70 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Vps13cQ8BX70 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Vps13cQ8BX70 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
Vps13cQ8BX70 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Vps13cQ8BX70 Gm17082-201ENSMUST00000166043 1091 ntBASIC26.11■■□□□ 1.77
Vps13cQ8BX70 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Vps13cQ8BX70 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Vps13cQ8BX70 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC26.04■■□□□ 1.76
Vps13cQ8BX70 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC26.02■■□□□ 1.76
Vps13cQ8BX70 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC25.98■■□□□ 1.75
Vps13cQ8BX70 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC25.95■■□□□ 1.74
Vps13cQ8BX70 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Vps13cQ8BX70 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC25.88■■□□□ 1.73
Vps13cQ8BX70 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC25.87■■□□□ 1.73
Vps13cQ8BX70 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC25.86■■□□□ 1.73
Vps13cQ8BX70 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Vps13cQ8BX70 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC25.85■■□□□ 1.73
Vps13cQ8BX70 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Vps13cQ8BX70 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Vps13cQ8BX70 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC25.84■■□□□ 1.73
Vps13cQ8BX70 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Vps13cQ8BX70 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC25.79■■□□□ 1.72
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms