Protein–RNA interactions for Protein: O88427

Cacna1h, Voltage-dependent T-type calcium channel subunit alpha-1H, mousemouse

Predictions only

Length 2,365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1hO88427 Gm25239-201ENSMUST00000174915 86 ntBASIC40.86■■■■■ 4.13
Cacna1hO88427 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC37.98■■■■□ 3.67
Cacna1hO88427 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC37.53■■■■□ 3.6
Cacna1hO88427 Gm24109-201ENSMUST00000175489 103 ntBASIC35.89■■■■□ 3.34
Cacna1hO88427 Gm15042-201ENSMUST00000120212 883 ntBASIC34.68■■■■□ 3.14
Cacna1hO88427 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC34.52■■■■□ 3.12
Cacna1hO88427 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC34.38■■■■□ 3.09
Cacna1hO88427 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC34.37■■■■□ 3.09
Cacna1hO88427 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC33.89■■■■□ 3.02
Cacna1hO88427 Gm15045-201ENSMUST00000117359 883 ntBASIC33.84■■■■□ 3.01
Cacna1hO88427 Gm23366-201ENSMUST00000175022 89 ntBASIC33.83■■■■□ 3.01
Cacna1hO88427 AC153911.1-202ENSMUST00000218534 1034 ntBASIC33.64■■■□□ 2.98
Cacna1hO88427 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC33.57■■■□□ 2.96
Cacna1hO88427 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC33.48■■■□□ 2.95
Cacna1hO88427 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC33.43■■■□□ 2.94
Cacna1hO88427 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC33.36■■■□□ 2.93
Cacna1hO88427 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
Cacna1hO88427 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC32.64■■■□□ 2.82
Cacna1hO88427 Gm25238-201ENSMUST00000174914 89 ntBASIC32.5■■■□□ 2.79
Cacna1hO88427 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
Cacna1hO88427 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
Cacna1hO88427 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC32.17■■■□□ 2.74
Cacna1hO88427 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC31.8■■■□□ 2.68
Cacna1hO88427 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
Cacna1hO88427 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC31.67■■■□□ 2.66
Cacna1hO88427 Gm25262-201ENSMUST00000174934 133 ntBASIC31.52■■■□□ 2.64
Cacna1hO88427 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC31.44■■■□□ 2.62
Cacna1hO88427 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC31.42■■■□□ 2.62
Cacna1hO88427 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC31.23■■■□□ 2.59
Cacna1hO88427 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC31.2■■■□□ 2.59
Cacna1hO88427 Gm26115-201ENSMUST00000175605 87 ntBASIC31.1■■■□□ 2.57
Cacna1hO88427 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC30.97■■■□□ 2.55
Cacna1hO88427 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC30.94■■■□□ 2.54
Cacna1hO88427 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
Cacna1hO88427 Gm8109-201ENSMUST00000194076 746 ntBASIC30.88■■■□□ 2.53
Cacna1hO88427 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
Cacna1hO88427 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC30.8■■■□□ 2.52
Cacna1hO88427 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC30.79■■■□□ 2.52
Cacna1hO88427 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
Cacna1hO88427 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
Cacna1hO88427 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
Cacna1hO88427 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC30.58■■■□□ 2.49
Cacna1hO88427 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
Cacna1hO88427 Gm27325-201ENSMUST00000175467 74 ntBASIC30.44■■■□□ 2.46
Cacna1hO88427 Rab21-202ENSMUST00000218831 843 ntBASIC30.38■■■□□ 2.45
Cacna1hO88427 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC30.34■■■□□ 2.45
Cacna1hO88427 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
Cacna1hO88427 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
Cacna1hO88427 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
Cacna1hO88427 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC30.21■■■□□ 2.43
Cacna1hO88427 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC30.2■■■□□ 2.43
Cacna1hO88427 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC30.08■■■□□ 2.41
Cacna1hO88427 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
Cacna1hO88427 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC30.01■■■□□ 2.39
Cacna1hO88427 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC30■■■□□ 2.39
Cacna1hO88427 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC29.99■■■□□ 2.39
Cacna1hO88427 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC29.98■■■□□ 2.39
Cacna1hO88427 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC29.97■■■□□ 2.39
Cacna1hO88427 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
Cacna1hO88427 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
Cacna1hO88427 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
Cacna1hO88427 Gm24804-201ENSMUST00000174982 85 ntBASIC29.74■■■□□ 2.35
Cacna1hO88427 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
Cacna1hO88427 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.34
Cacna1hO88427 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
Cacna1hO88427 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
Cacna1hO88427 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC29.62■■■□□ 2.33
Cacna1hO88427 Gm17082-201ENSMUST00000166043 1091 ntBASIC29.57■■■□□ 2.32
Cacna1hO88427 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
Cacna1hO88427 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC29.41■■■□□ 2.3
Cacna1hO88427 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
Cacna1hO88427 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC29.39■■■□□ 2.29
Cacna1hO88427 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC29.38■■■□□ 2.29
Cacna1hO88427 Zfp131-205ENSMUST00000223812 663 ntBASIC29.38■■■□□ 2.29
Cacna1hO88427 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC29.35■■■□□ 2.29
Cacna1hO88427 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC29.29■■■□□ 2.28
Cacna1hO88427 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC29.28■■■□□ 2.28
Cacna1hO88427 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
Cacna1hO88427 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC29.28■■■□□ 2.28
Cacna1hO88427 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC29.21■■■□□ 2.27
Cacna1hO88427 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC29.19■■■□□ 2.26
Cacna1hO88427 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC29.19■■■□□ 2.26
Cacna1hO88427 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
Cacna1hO88427 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
Cacna1hO88427 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
Cacna1hO88427 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
Cacna1hO88427 Gm27322-201ENSMUST00000184007 104 ntBASIC29.1■■■□□ 2.25
Cacna1hO88427 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC29.06■■■□□ 2.24
Cacna1hO88427 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
Cacna1hO88427 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC28.99■■■□□ 2.23
Cacna1hO88427 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC28.94■■■□□ 2.22
Cacna1hO88427 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
Cacna1hO88427 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC28.89■■■□□ 2.22
Cacna1hO88427 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC28.89■■■□□ 2.22
Cacna1hO88427 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
Cacna1hO88427 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC28.81■■■□□ 2.2
Cacna1hO88427 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
Cacna1hO88427 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
Cacna1hO88427 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
Cacna1hO88427 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC28.77■■■□□ 2.2
Retrieved 100 of 76,532 protein–RNA pairs in 73 ms