Protein–RNA interactions for Protein: O88427

Cacna1h, Voltage-dependent T-type calcium channel subunit alpha-1H, mousemouse

Predictions only

Length 2,365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1hO88427 Gm25239-201ENSMUST00000174915 86 ntBASIC40,86■■■■■ 4,13
Cacna1hO88427 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC37,98■■■■□ 3,67
Cacna1hO88427 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC37,53■■■■□ 3,6
Cacna1hO88427 Gm24109-201ENSMUST00000175489 103 ntBASIC35,89■■■■□ 3,34
Cacna1hO88427 Gm15042-201ENSMUST00000120212 883 ntBASIC34,68■■■■□ 3,14
Cacna1hO88427 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC34,52■■■■□ 3,12
Cacna1hO88427 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC34,38■■■■□ 3,09
Cacna1hO88427 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC34,37■■■■□ 3,09
Cacna1hO88427 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC33,89■■■■□ 3,02
Cacna1hO88427 Gm15045-201ENSMUST00000117359 883 ntBASIC33,84■■■■□ 3,01
Cacna1hO88427 Gm23366-201ENSMUST00000175022 89 ntBASIC33,83■■■■□ 3,01
Cacna1hO88427 AC153911.1-202ENSMUST00000218534 1034 ntBASIC33,64■■■□□ 2,98
Cacna1hO88427 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC33,57■■■□□ 2,96
Cacna1hO88427 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC33,48■■■□□ 2,95
Cacna1hO88427 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC33,43■■■□□ 2,94
Cacna1hO88427 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC33,36■■■□□ 2,93
Cacna1hO88427 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC32,71■■■□□ 2,83
Cacna1hO88427 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC32,64■■■□□ 2,82
Cacna1hO88427 Gm25238-201ENSMUST00000174914 89 ntBASIC32,5■■■□□ 2,79
Cacna1hO88427 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC32,47■■■□□ 2,79
Cacna1hO88427 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC32,34■■■□□ 2,77
Cacna1hO88427 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC32,17■■■□□ 2,74
Cacna1hO88427 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC31,8■■■□□ 2,68
Cacna1hO88427 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC31,78■■■□□ 2,68
Cacna1hO88427 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC31,67■■■□□ 2,66
Cacna1hO88427 Gm25262-201ENSMUST00000174934 133 ntBASIC31,52■■■□□ 2,64
Cacna1hO88427 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC31,44■■■□□ 2,62
Cacna1hO88427 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC31,42■■■□□ 2,62
Cacna1hO88427 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC31,23■■■□□ 2,59
Cacna1hO88427 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC31,2■■■□□ 2,59
Cacna1hO88427 Gm26115-201ENSMUST00000175605 87 ntBASIC31,1■■■□□ 2,57
Cacna1hO88427 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC30,97■■■□□ 2,55
Cacna1hO88427 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC30,94■■■□□ 2,54
Cacna1hO88427 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC30,89■■■□□ 2,54
Cacna1hO88427 Gm8109-201ENSMUST00000194076 746 ntBASIC30,88■■■□□ 2,53
Cacna1hO88427 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC30,85■■■□□ 2,53
Cacna1hO88427 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC30,8■■■□□ 2,52
Cacna1hO88427 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC30,79■■■□□ 2,52
Cacna1hO88427 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC30,7■■■□□ 2,51
Cacna1hO88427 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC30,64■■■□□ 2,5
Cacna1hO88427 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC30,6■■■□□ 2,49
Cacna1hO88427 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC30,58■■■□□ 2,49
Cacna1hO88427 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC30,48■■■□□ 2,47
Cacna1hO88427 Gm27325-201ENSMUST00000175467 74 ntBASIC30,44■■■□□ 2,46
Cacna1hO88427 Rab21-202ENSMUST00000218831 843 ntBASIC30,38■■■□□ 2,45
Cacna1hO88427 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC30,34■■■□□ 2,45
Cacna1hO88427 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC30,32■■■□□ 2,44
Cacna1hO88427 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC30,29■■■□□ 2,44
Cacna1hO88427 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC30,25■■■□□ 2,43
Cacna1hO88427 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC30,21■■■□□ 2,43
Cacna1hO88427 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC30,2■■■□□ 2,43
Cacna1hO88427 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC30,08■■■□□ 2,41
Cacna1hO88427 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC30,07■■■□□ 2,4
Cacna1hO88427 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC30,01■■■□□ 2,39
Cacna1hO88427 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC30■■■□□ 2,39
Cacna1hO88427 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC29,99■■■□□ 2,39
Cacna1hO88427 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC29,98■■■□□ 2,39
Cacna1hO88427 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC29,97■■■□□ 2,39
Cacna1hO88427 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC29,84■■■□□ 2,37
Cacna1hO88427 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC29,83■■■□□ 2,37
Cacna1hO88427 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC29,75■■■□□ 2,35
Cacna1hO88427 Gm24804-201ENSMUST00000174982 85 ntBASIC29,74■■■□□ 2,35
Cacna1hO88427 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC29,7■■■□□ 2,35
Cacna1hO88427 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC29,7■■■□□ 2,34
Cacna1hO88427 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC29,67■■■□□ 2,34
Cacna1hO88427 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC29,62■■■□□ 2,33
Cacna1hO88427 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC29,62■■■□□ 2,33
Cacna1hO88427 Gm17082-201ENSMUST00000166043 1091 ntBASIC29,57■■■□□ 2,32
Cacna1hO88427 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC29,52■■■□□ 2,32
Cacna1hO88427 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC29,41■■■□□ 2,3
Cacna1hO88427 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC29,39■■■□□ 2,3
Cacna1hO88427 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC29,39■■■□□ 2,29
Cacna1hO88427 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC29,38■■■□□ 2,29
Cacna1hO88427 Zfp131-205ENSMUST00000223812 663 ntBASIC29,38■■■□□ 2,29
Cacna1hO88427 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC29,35■■■□□ 2,29
Cacna1hO88427 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC29,29■■■□□ 2,28
Cacna1hO88427 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC29,28■■■□□ 2,28
Cacna1hO88427 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC29,28■■■□□ 2,28
Cacna1hO88427 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC29,28■■■□□ 2,28
Cacna1hO88427 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC29,21■■■□□ 2,27
Cacna1hO88427 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC29,19■■■□□ 2,26
Cacna1hO88427 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC29,19■■■□□ 2,26
Cacna1hO88427 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC29,18■■■□□ 2,26
Cacna1hO88427 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC29,15■■■□□ 2,26
Cacna1hO88427 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC29,13■■■□□ 2,25
Cacna1hO88427 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC29,12■■■□□ 2,25
Cacna1hO88427 Gm27322-201ENSMUST00000184007 104 ntBASIC29,1■■■□□ 2,25
Cacna1hO88427 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC29,06■■■□□ 2,24
Cacna1hO88427 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC29,05■■■□□ 2,24
Cacna1hO88427 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC28,99■■■□□ 2,23
Cacna1hO88427 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC28,94■■■□□ 2,22
Cacna1hO88427 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC28,91■■■□□ 2,22
Cacna1hO88427 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC28,89■■■□□ 2,22
Cacna1hO88427 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC28,89■■■□□ 2,22
Cacna1hO88427 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC28,89■■■□□ 2,22
Cacna1hO88427 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC28,81■■■□□ 2,2
Cacna1hO88427 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC28,81■■■□□ 2,2
Cacna1hO88427 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC28,8■■■□□ 2,2
Cacna1hO88427 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC28,8■■■□□ 2,2
Cacna1hO88427 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC28,77■■■□□ 2,2
Retrieved 100 of 76,532 protein–RNA pairs in 10,8 ms