RNA–Protein interactions for RNA: ENSMUST00000111051.9

Bdnf-210, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 4,125 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-210ENSMUST00000111051 Pear1Q8VIK5 1034 aa6.64□□□□□ -1.35
Bdnf-210ENSMUST00000111051 CklfQ9DAS1 152 aa6.64□□□□□ -1.35
Bdnf-210ENSMUST00000111051 Ptprz1B9EKR1 2312 aa6.64□□□□□ -1.35
Bdnf-210ENSMUST00000111051 Gm45717A0A1B0GT68 152 aa6.64□□□□□ -1.35
Bdnf-210ENSMUST00000111051 Hbb-bsA8DUK4 147 aa6.64□□□□□ -1.35
Bdnf-210ENSMUST00000111051 Ly6lH3BJG9 140 aa6.64□□□□□ -1.35
Bdnf-210ENSMUST00000111051 Lgals6O54891 301 aa6.64□□□□□ -1.35
Bdnf-210ENSMUST00000111051 Vamp8O70404 101 aa6.64□□□□□ -1.35
Bdnf-210ENSMUST00000111051 Hbb-b1P02088 147 aa6.64□□□□□ -1.35
Bdnf-210ENSMUST00000111051 Gm26938S4R185 226 aa6.64□□□□□ -1.35
Bdnf-210ENSMUST00000111051 Gsx1P31315 261 aa6.64□□□□□ -1.35
Bdnf-210ENSMUST00000111051 Snrnp40Q6PE01 358 aa6.64□□□□□ -1.35
Bdnf-210ENSMUST00000111051 Ahctf1Q8CJF7 2243 aaKnown RBP6.63□□□□□ -1.35
Bdnf-210ENSMUST00000111051 Umad1E0CX23 159 aa6.63□□□□□ -1.35
Bdnf-210ENSMUST00000111051 Gm26602M0QWA4 95 aa6.63□□□□□ -1.35
Bdnf-210ENSMUST00000111051 P01791 123 aa6.63□□□□□ -1.35
Bdnf-210ENSMUST00000111051 Gm17324Q8C6J8 137 aa6.63□□□□□ -1.35
Bdnf-210ENSMUST00000111051 Gtsf1lQ9CWD0 151 aa6.63□□□□□ -1.35
Bdnf-210ENSMUST00000111051 Avpi1Q9D7H4 142 aa6.63□□□□□ -1.35
Bdnf-210ENSMUST00000111051 Tanc2A2A690 1994 aa6.63□□□□□ -1.35
Bdnf-210ENSMUST00000111051 Flg2Q2VIS4 2362 aa6.63□□□□□ -1.35
Bdnf-210ENSMUST00000111051 NrepQ07475 68 aa6.63□□□□□ -1.35
Bdnf-210ENSMUST00000111051 TectaO08523 2155 aa6.63□□□□□ -1.35
Bdnf-210ENSMUST00000111051 KprpB2RUR4 657 aa6.63□□□□□ -1.35
Bdnf-210ENSMUST00000111051 P01801 115 aa6.63□□□□□ -1.35
Bdnf-210ENSMUST00000111051 LoxP28301 411 aa6.63□□□□□ -1.35
Bdnf-210ENSMUST00000111051 CenpeQ6RT24 2474 aaKnown RBP6.63□□□□□ -1.35
Bdnf-210ENSMUST00000111051 Col4a4Q9QZR9 1682 aa6.63□□□□□ -1.35
Bdnf-210ENSMUST00000111051 Ighv8-4A0A0A6YW26 117 aa6.62□□□□□ -1.35
Bdnf-210ENSMUST00000111051 Smlr1J3QMJ4 66 aa6.62□□□□□ -1.35
Bdnf-210ENSMUST00000111051 TgfaP48030 159 aa6.62□□□□□ -1.35
Bdnf-210ENSMUST00000111051 Olfr1209Q3SXJ3 310 aa6.62□□□□□ -1.35
Bdnf-210ENSMUST00000111051 Spsb3Q571F5 354 aa6.62□□□□□ -1.35
Bdnf-210ENSMUST00000111051 Dtx1Q61010 627 aa6.62□□□□□ -1.35
Bdnf-210ENSMUST00000111051 Gm4763Q8CFJ5 196 aa6.62□□□□□ -1.35
Bdnf-210ENSMUST00000111051 CtrlQ9ER05 264 aa6.62□□□□□ -1.35
Bdnf-210ENSMUST00000111051 Col5a1O88207 1838 aa6.62□□□□□ -1.35
Bdnf-210ENSMUST00000111051 Trav14-2A0A075B694 121 aa6.62□□□□□ -1.35
Bdnf-210ENSMUST00000111051 Smim20D3Z7Q2 69 aa6.62□□□□□ -1.35
Bdnf-210ENSMUST00000111051 E030018B13RikJ3QMS9 113 aa6.62□□□□□ -1.35
Bdnf-210ENSMUST00000111051 Wt1P22561 449 aa6.62□□□□□ -1.35
Bdnf-210ENSMUST00000111051 Cd27P41272 250 aa6.62□□□□□ -1.35
Bdnf-210ENSMUST00000111051 BC048562Q80ZQ7 204 aa6.62□□□□□ -1.35
Bdnf-210ENSMUST00000111051 PpdpfQ9CR37 115 aa6.62□□□□□ -1.35
Bdnf-210ENSMUST00000111051 Cysrt1Q9D1E4 142 aa6.62□□□□□ -1.35
Bdnf-210ENSMUST00000111051 IcosQ9WVS0 200 aa6.62□□□□□ -1.35
Bdnf-210ENSMUST00000111051 Eml6Q5SQM0 1958 aa6.62□□□□□ -1.35
Bdnf-210ENSMUST00000111051 Shisal2aA2A9G7 189 aa6.62□□□□□ -1.35
Bdnf-210ENSMUST00000111051 Hist1h1tQ07133 208 aa6.62□□□□□ -1.35
Bdnf-210ENSMUST00000111051 Mcrip2Q9CQB2 160 aaKnown RBP6.62□□□□□ -1.35
Bdnf-210ENSMUST00000111051 RhohQ9D3G9 191 aa6.62□□□□□ -1.35
Bdnf-210ENSMUST00000111051 Ighv5-6A0A075B5Q0 117 aa6.61□□□□□ -1.35
Bdnf-210ENSMUST00000111051 Spata46Q4FZF2 204 aa6.61□□□□□ -1.35
Bdnf-210ENSMUST00000111051 Stpg1Q9D2F5 341 aa6.61□□□□□ -1.35
Bdnf-210ENSMUST00000111051 Tspan13Q9D8C2 204 aa6.61□□□□□ -1.35
Bdnf-210ENSMUST00000111051 Pgpep1Q9ESW8 209 aa6.61□□□□□ -1.35
Bdnf-210ENSMUST00000111051 Gm28539A0A087WSL9 92 aa6.61□□□□□ -1.35
Bdnf-210ENSMUST00000111051 P01725 110 aa6.61□□□□□ -1.35
Bdnf-210ENSMUST00000111051 Tmem219Q9D123 240 aa6.61□□□□□ -1.35
Bdnf-210ENSMUST00000111051 Obox1Q9D350 204 aa6.61□□□□□ -1.35
Bdnf-210ENSMUST00000111051 Gm15294V9GXA7 121 aa6.61□□□□□ -1.35
Bdnf-210ENSMUST00000111051 CenpfE9Q3P4 2997 aaKnown RBP6.61□□□□□ -1.35
Bdnf-210ENSMUST00000111051 Sptan1P16546 2472 aaKnown RBP6.61□□□□□ -1.35
Bdnf-210ENSMUST00000111051 Nxph4G3X9N5 304 aa6.61□□□□□ -1.35
Bdnf-210ENSMUST00000111051 P0C913 63 aa6.61□□□□□ -1.35
Bdnf-210ENSMUST00000111051 Lynx1P0DP60 116 aa6.61□□□□□ -1.35
Bdnf-210ENSMUST00000111051 Klhdc1Q80YG3 406 aa6.61□□□□□ -1.35
Bdnf-210ENSMUST00000111051 Gm29289A0A087WPY7 166 aa6.61□□□□□ -1.35
Bdnf-210ENSMUST00000111051 Gm4064A0A087WR82 380 aa6.61□□□□□ -1.35
Bdnf-210ENSMUST00000111051 Gm10352B2RWR6 380 aa6.61□□□□□ -1.35
Bdnf-210ENSMUST00000111051 Gm2174F6ZVF2 133 aa6.61□□□□□ -1.35
Bdnf-210ENSMUST00000111051 Gm21693J3QK27 380 aa6.61□□□□□ -1.35
Bdnf-210ENSMUST00000111051 Rbmy1a1O35698 380 aa6.61□□□□□ -1.35
Bdnf-210ENSMUST00000111051 CntfrO88507 372 aa6.61□□□□□ -1.35
Bdnf-210ENSMUST00000111051 Mrpl36Q99N90 102 aa6.61□□□□□ -1.35
Bdnf-210ENSMUST00000111051 Tcrg-C1A0A075B5Z0 172 aa6.6□□□□□ -1.35
Bdnf-210ENSMUST00000111051 Gm45521A0A1B0GRK0 198 aa6.6□□□□□ -1.35
Bdnf-210ENSMUST00000111051 Gm5105Q8C6Y9 112 aa6.6□□□□□ -1.35
Bdnf-210ENSMUST00000111051 Parm1Q923D3 296 aa6.6□□□□□ -1.35
Bdnf-210ENSMUST00000111051 Tac4Q99N14 128 aa6.6□□□□□ -1.35
Bdnf-210ENSMUST00000111051 Ighv6-7A0A0A6YWU3 119 aa6.6□□□□□ -1.35
Bdnf-210ENSMUST00000111051 Ighv8-8A0A0A6YXQ0 119 aa6.6□□□□□ -1.35
Bdnf-210ENSMUST00000111051 Gm28038F7BCN9 126 aa6.6□□□□□ -1.35
Bdnf-210ENSMUST00000111051 Gm5294J3QP53 216 aa6.6□□□□□ -1.35
Bdnf-210ENSMUST00000111051 Tal2Q62282 108 aa6.6□□□□□ -1.35
Bdnf-210ENSMUST00000111051 F930015N05RikQ8C3A3 210 aa6.6□□□□□ -1.35
Bdnf-210ENSMUST00000111051 8030423J24RikQ9CX45 142 aa6.6□□□□□ -1.35
Bdnf-210ENSMUST00000111051 Cxcl14Q9WUQ5 99 aa6.6□□□□□ -1.35
Bdnf-210ENSMUST00000111051 NpsP0C0P8 89 aa6.6□□□□□ -1.35
Bdnf-210ENSMUST00000111051 Tdgf1P51865 171 aa6.6□□□□□ -1.35
Bdnf-210ENSMUST00000111051 Pgpep1lQ9CWB5 130 aa6.6□□□□□ -1.35
Bdnf-210ENSMUST00000111051 Wfdc2Q9DAU7 174 aa6.6□□□□□ -1.35
Bdnf-210ENSMUST00000111051 Rab37Q9JKM7 223 aa6.6□□□□□ -1.35
Bdnf-210ENSMUST00000111051 Ighv2-6A0A075B6A7 116 aa6.59□□□□□ -1.35
Bdnf-210ENSMUST00000111051 Hint1P70349 126 aaKnown RBP6.59□□□□□ -1.35
Bdnf-210ENSMUST00000111051 Gm9949Q8C9F4 104 aa6.59□□□□□ -1.35
Bdnf-210ENSMUST00000111051 Shisa9Q9CZN4 424 aa6.59□□□□□ -1.35
Bdnf-210ENSMUST00000111051 Pla2g2eQ9QUL3 142 aa6.59□□□□□ -1.35
Bdnf-210ENSMUST00000111051 Ighv1-23A0A0A6YVW3 117 aa6.59□□□□□ -1.35
Bdnf-210ENSMUST00000111051 Ighv1-20A0A0A6YX66 117 aa6.59□□□□□ -1.35
Retrieved 100 of 22,080 RNA–protein pairs in 32.3 ms