Protein–RNA interactions for Protein: A0A0A6YX66

Ighv1-20, Immunoglobulin heavy variable V1-20 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-20A0A0A6YX66 Gm25239-201ENSMUST00000174915 86 ntBASIC30.72■■■□□ 2.51
Ighv1-20A0A0A6YX66 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
Ighv1-20A0A0A6YX66 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
Ighv1-20A0A0A6YX66 Gm15042-201ENSMUST00000120212 883 ntBASIC27.01■■□□□ 1.91
Ighv1-20A0A0A6YX66 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Ighv1-20A0A0A6YX66 Gm24109-201ENSMUST00000175489 103 ntBASIC26.52■■□□□ 1.84
Ighv1-20A0A0A6YX66 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Ighv1-20A0A0A6YX66 Gm15045-201ENSMUST00000117359 883 ntBASIC26.38■■□□□ 1.81
Ighv1-20A0A0A6YX66 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Ighv1-20A0A0A6YX66 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC26.1■■□□□ 1.77
Ighv1-20A0A0A6YX66 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC25.92■■□□□ 1.74
Ighv1-20A0A0A6YX66 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
Ighv1-20A0A0A6YX66 Gm23366-201ENSMUST00000175022 89 ntBASIC25.73■■□□□ 1.71
Ighv1-20A0A0A6YX66 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Ighv1-20A0A0A6YX66 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Ighv1-20A0A0A6YX66 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC25.2■■□□□ 1.62
Ighv1-20A0A0A6YX66 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Ighv1-20A0A0A6YX66 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
Ighv1-20A0A0A6YX66 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Ighv1-20A0A0A6YX66 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC24.92■■□□□ 1.58
Ighv1-20A0A0A6YX66 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Ighv1-20A0A0A6YX66 Psd-208ENSMUST00000224556 2034 ntBASIC24.81■■□□□ 1.56
Ighv1-20A0A0A6YX66 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC24.8■■□□□ 1.56
Ighv1-20A0A0A6YX66 AC153911.1-202ENSMUST00000218534 1034 ntBASIC24.78■■□□□ 1.56
Ighv1-20A0A0A6YX66 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC24.77■■□□□ 1.56
Ighv1-20A0A0A6YX66 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Ighv1-20A0A0A6YX66 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC24.74■■□□□ 1.55
Ighv1-20A0A0A6YX66 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC24.64■■□□□ 1.53
Ighv1-20A0A0A6YX66 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
Ighv1-20A0A0A6YX66 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC24.54■■□□□ 1.52
Ighv1-20A0A0A6YX66 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC24.45■■□□□ 1.5
Ighv1-20A0A0A6YX66 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Ighv1-20A0A0A6YX66 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Ighv1-20A0A0A6YX66 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Ighv1-20A0A0A6YX66 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC24.27■■□□□ 1.48
Ighv1-20A0A0A6YX66 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Ighv1-20A0A0A6YX66 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC24.23■■□□□ 1.47
Ighv1-20A0A0A6YX66 Gm25238-201ENSMUST00000174914 89 ntBASIC24.17■■□□□ 1.46
Ighv1-20A0A0A6YX66 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Ighv1-20A0A0A6YX66 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
Ighv1-20A0A0A6YX66 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Ighv1-20A0A0A6YX66 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Ighv1-20A0A0A6YX66 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Ighv1-20A0A0A6YX66 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC23.86■■□□□ 1.41
Ighv1-20A0A0A6YX66 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Ighv1-20A0A0A6YX66 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC23.78■■□□□ 1.4
Ighv1-20A0A0A6YX66 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC23.73■■□□□ 1.39
Ighv1-20A0A0A6YX66 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Ighv1-20A0A0A6YX66 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Ighv1-20A0A0A6YX66 Gm27325-201ENSMUST00000175467 74 ntBASIC23.67■■□□□ 1.38
Ighv1-20A0A0A6YX66 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
Ighv1-20A0A0A6YX66 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Ighv1-20A0A0A6YX66 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Ighv1-20A0A0A6YX66 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC23.56■■□□□ 1.36
Ighv1-20A0A0A6YX66 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC23.52■■□□□ 1.36
Ighv1-20A0A0A6YX66 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Ighv1-20A0A0A6YX66 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC23.46■■□□□ 1.35
Ighv1-20A0A0A6YX66 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC23.45■■□□□ 1.34
Ighv1-20A0A0A6YX66 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC23.42■■□□□ 1.34
Ighv1-20A0A0A6YX66 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Ighv1-20A0A0A6YX66 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Ighv1-20A0A0A6YX66 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Ighv1-20A0A0A6YX66 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Ighv1-20A0A0A6YX66 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC23.27■■□□□ 1.32
Ighv1-20A0A0A6YX66 Gm10524-201ENSMUST00000181931 1893 ntBASIC23.26■■□□□ 1.31
Ighv1-20A0A0A6YX66 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Ighv1-20A0A0A6YX66 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Ighv1-20A0A0A6YX66 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Ighv1-20A0A0A6YX66 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
Ighv1-20A0A0A6YX66 Rab21-202ENSMUST00000218831 843 ntBASIC23.18■■□□□ 1.3
Ighv1-20A0A0A6YX66 Gm25262-201ENSMUST00000174934 133 ntBASIC23.16■■□□□ 1.3
Ighv1-20A0A0A6YX66 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Ighv1-20A0A0A6YX66 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Ighv1-20A0A0A6YX66 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Ighv1-20A0A0A6YX66 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Ighv1-20A0A0A6YX66 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC23.1■■□□□ 1.29
Ighv1-20A0A0A6YX66 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.29
Ighv1-20A0A0A6YX66 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC23.04■■□□□ 1.28
Ighv1-20A0A0A6YX66 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Ighv1-20A0A0A6YX66 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Ighv1-20A0A0A6YX66 CT025624.2-201ENSMUST00000223609 1909 ntBASIC22.97■■□□□ 1.27
Ighv1-20A0A0A6YX66 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Ighv1-20A0A0A6YX66 Gm42596-201ENSMUST00000196305 1958 ntBASIC22.87■■□□□ 1.25
Ighv1-20A0A0A6YX66 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC22.86■■□□□ 1.25
Ighv1-20A0A0A6YX66 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
Ighv1-20A0A0A6YX66 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Ighv1-20A0A0A6YX66 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC22.77■■□□□ 1.24
Ighv1-20A0A0A6YX66 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC22.77■■□□□ 1.24
Ighv1-20A0A0A6YX66 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Ighv1-20A0A0A6YX66 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC22.74■■□□□ 1.23
Ighv1-20A0A0A6YX66 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC22.74■■□□□ 1.23
Ighv1-20A0A0A6YX66 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC22.69■■□□□ 1.22
Ighv1-20A0A0A6YX66 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Ighv1-20A0A0A6YX66 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
Ighv1-20A0A0A6YX66 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.21
Ighv1-20A0A0A6YX66 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC22.63■■□□□ 1.21
Ighv1-20A0A0A6YX66 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
Ighv1-20A0A0A6YX66 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Ighv1-20A0A0A6YX66 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Ighv1-20A0A0A6YX66 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Retrieved 100 of 76,532 protein–RNA pairs in 13.9 ms