Protein–RNA interactions for Protein: P01801

Ig heavy chain V-III region J606, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01801 Gm25239-201ENSMUST00000174915 86 ntBASIC30.78■■■□□ 2.52
P01801 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
P01801 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
P01801 Gm15042-201ENSMUST00000120212 883 ntBASIC26.91■■□□□ 1.9
P01801 Gm24109-201ENSMUST00000175489 103 ntBASIC26.66■■□□□ 1.86
P01801 Gm15045-201ENSMUST00000117359 883 ntBASIC26.22■■□□□ 1.79
P01801 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
P01801 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
P01801 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC26.01■■□□□ 1.75
P01801 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
P01801 Gm23366-201ENSMUST00000175022 89 ntBASIC25.8■■□□□ 1.72
P01801 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
P01801 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
P01801 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
P01801 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC25.08■■□□□ 1.61
P01801 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC24.89■■□□□ 1.57
P01801 AC153911.1-202ENSMUST00000218534 1034 ntBASIC24.85■■□□□ 1.57
P01801 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC24.7■■□□□ 1.54
P01801 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
P01801 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
P01801 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC24.64■■□□□ 1.54
P01801 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC24.6■■□□□ 1.53
P01801 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
P01801 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
P01801 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
P01801 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC24.43■■□□□ 1.5
P01801 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
P01801 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
P01801 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
P01801 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC24.27■■□□□ 1.48
P01801 Gm25238-201ENSMUST00000174914 89 ntBASIC24.24■■□□□ 1.47
P01801 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
P01801 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
P01801 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC24.15■■□□□ 1.46
P01801 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC23.96■■□□□ 1.43
P01801 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
P01801 Psd-208ENSMUST00000224556 2034 ntBASIC23.89■■□□□ 1.42
P01801 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
P01801 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
P01801 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
P01801 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC23.74■■□□□ 1.39
P01801 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC23.71■■□□□ 1.39
P01801 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC23.68■■□□□ 1.38
P01801 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
P01801 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
P01801 Gm27325-201ENSMUST00000175467 74 ntBASIC23.55■■□□□ 1.36
P01801 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC23.5■■□□□ 1.35
P01801 Gm25262-201ENSMUST00000174934 133 ntBASIC23.4■■□□□ 1.34
P01801 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
P01801 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC23.35■■□□□ 1.33
P01801 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
P01801 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
P01801 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
P01801 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
P01801 Rab21-202ENSMUST00000218831 843 ntBASIC23.22■■□□□ 1.31
P01801 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
P01801 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC23.17■■□□□ 1.3
P01801 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC23.16■■□□□ 1.3
P01801 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
P01801 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC23.09■■□□□ 1.29
P01801 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
P01801 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
P01801 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC22.95■■□□□ 1.26
P01801 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC22.95■■□□□ 1.26
P01801 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
P01801 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
P01801 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC22.84■■□□□ 1.25
P01801 Gm26115-201ENSMUST00000175605 87 ntBASIC22.84■■□□□ 1.25
P01801 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC22.83■■□□□ 1.25
P01801 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
P01801 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
P01801 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
P01801 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC22.78■■□□□ 1.24
P01801 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
P01801 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC22.77■■□□□ 1.24
P01801 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
P01801 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC22.73■■□□□ 1.23
P01801 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
P01801 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
P01801 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
P01801 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC22.69■■□□□ 1.22
P01801 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
P01801 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC22.64■■□□□ 1.21
P01801 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
P01801 Gm8109-201ENSMUST00000194076 746 ntBASIC22.61■■□□□ 1.21
P01801 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.21
P01801 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC22.58■■□□□ 1.21
P01801 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
P01801 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
P01801 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
P01801 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC22.52■■□□□ 1.2
P01801 Gm10524-201ENSMUST00000181931 1893 ntBASIC22.51■■□□□ 1.19
P01801 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
P01801 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
P01801 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC22.5■■□□□ 1.19
P01801 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
P01801 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
P01801 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.17
P01801 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC22.36■■□□□ 1.17
P01801 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms