RNA–Protein interactions for RNA: ENSMUST00000111051.9

Bdnf-210, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 4,125 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-210ENSMUST00000111051 Rhox8Q6VSS7 320 aa14.75□□□□□ -0.05
Bdnf-210ENSMUST00000111051 NischQ80TM9 1593 aa14.45□□□□□ -0.1
Bdnf-210ENSMUST00000111051 Rpgrip1Q9EPQ2 1331 aa14.09□□□□□ -0.15
Bdnf-210ENSMUST00000111051 Abcc9P70170 1546 aa13.83□□□□□ -0.2
Bdnf-210ENSMUST00000111051 Rtl1Q7M732 1744 aa13.67□□□□□ -0.22
Bdnf-210ENSMUST00000111051 Ccdc180J3QNE4 1664 aa13.64□□□□□ -0.23
Bdnf-210ENSMUST00000111051 Ehmt2Q9Z148 1263 aaKnown RBP13.47□□□□□ -0.25
Bdnf-210ENSMUST00000111051 Abcc8B2RUS7 1588 aa13.46□□□□□ -0.25
Bdnf-210ENSMUST00000111051 Gm35339A0A140LHH9 1649 aa13.44□□□□□ -0.26
Bdnf-210ENSMUST00000111051 Acin1Q9JIX8 1338 aaKnown RBP13.42□□□□□ -0.26
Bdnf-210ENSMUST00000111051 Ccdc136Q3TVA9 1136 aa13.4□□□□□ -0.26
Bdnf-210ENSMUST00000111051 HrcG5E8J6 738 aa13.31□□□□□ -0.28
Bdnf-210ENSMUST00000111051 Trim41Q5NCC3 630 aa13.22□□□□□ -0.29
Bdnf-210ENSMUST00000111051 Pcgf6Q99NA9 353 aa12.98□□□□□ -0.33
Bdnf-210ENSMUST00000111051 Cngb1E1AZ71 1325 aa12.97□□□□□ -0.33
Bdnf-210ENSMUST00000111051 Las1lA2BE28 776 aaKnown RBP12.94□□□□□ -0.34
Bdnf-210ENSMUST00000111051 Gab3Q8BSM5 595 aa12.91□□□□□ -0.34
Bdnf-210ENSMUST00000111051 Zeb1Q64318 1117 aa12.88□□□□□ -0.35
Bdnf-210ENSMUST00000111051 Dcaf1Q80TR8 1506 aa12.87□□□□□ -0.35
Bdnf-210ENSMUST00000111051 NefmP08553 848 aa12.86□□□□□ -0.35
Bdnf-210ENSMUST00000111051 Esf1Q3V1V3 845 aaKnown RBP12.81□□□□□ -0.36
Bdnf-210ENSMUST00000111051 Myt1Q8CFC2 1127 aa12.81□□□□□ -0.36
Bdnf-210ENSMUST00000111051 Zcchc6Q5BLK4 1491 aaKnown RBP12.78□□□□□ -0.36
Bdnf-210ENSMUST00000111051 Wdr66E9Q743 1299 aa12.72□□□□□ -0.37
Bdnf-210ENSMUST00000111051 CenpbP27790 599 aa12.69□□□□□ -0.38
Bdnf-210ENSMUST00000111051 Supt5hO55201 1082 aaKnown RBP12.68□□□□□ -0.38
Bdnf-210ENSMUST00000111051 Rb1cc1Q9ESK9 1588 aa12.68□□□□□ -0.38
Bdnf-210ENSMUST00000111051 DiexfQ8BTT6 772 aaKnown RBP12.63□□□□□ -0.39
Bdnf-210ENSMUST00000111051 Cep164Q5DU05 1446 aa12.62□□□□□ -0.39
Bdnf-210ENSMUST00000111051 UbtfP25976 765 aaKnown RBP12.54□□□□□ -0.4
Bdnf-210ENSMUST00000111051 Myt1lP97500 1187 aa12.51□□□□□ -0.41
Bdnf-210ENSMUST00000111051 Npm2Q80W85 207 aa12.51□□□□□ -0.41
Bdnf-210ENSMUST00000111051 Baz1aO88379 1555 aa12.51□□□□□ -0.41
Bdnf-210ENSMUST00000111051 Neurod1Q60867 357 aa12.51□□□□□ -0.41
Bdnf-210ENSMUST00000111051 Mier1Q5UAK0 511 aa12.49□□□□□ -0.41
Bdnf-210ENSMUST00000111051 Cdk11bP24788 784 aaKnown RBP12.41□□□□□ -0.42
Bdnf-210ENSMUST00000111051 Brd4Q9ESU6 1400 aaKnown RBP12.4□□□□□ -0.42
Bdnf-210ENSMUST00000111051 Chic1Q8CBW7 227 aa12.39□□□□□ -0.43
Bdnf-210ENSMUST00000111051 NacadQ5SWP3 1504 aa12.38□□□□□ -0.43
Bdnf-210ENSMUST00000111051 Nop58Q6DFW4 536 aaKnown RBP12.33□□□□□ -0.44
Bdnf-210ENSMUST00000111051 1700123L14RikQ3V2K7 440 aa12.33□□□□□ -0.44
Bdnf-210ENSMUST00000111051 Kdm5dQ62240 1548 aa12.3□□□□□ -0.44
Bdnf-210ENSMUST00000111051 Sall2Q9QX96 1004 aa12.29□□□□□ -0.44
Bdnf-210ENSMUST00000111051 Bcl11aQ9QYE3 773 aa12.24□□□□□ -0.45
Bdnf-210ENSMUST00000111051 TonslQ6NZL6 1363 aa12.24□□□□□ -0.45
Bdnf-210ENSMUST00000111051 ClspnQ80YR7 1315 aa12.23□□□□□ -0.45
Bdnf-210ENSMUST00000111051 Anks4bQ8K3X6 423 aa12.22□□□□□ -0.45
Bdnf-210ENSMUST00000111051 Rsf1E9PWW9 1441 aaKnown RBP12.2□□□□□ -0.46
Bdnf-210ENSMUST00000111051 Golga3P55937 1487 aa12.19□□□□□ -0.46
Bdnf-210ENSMUST00000111051 Amer1Q7TS75 1132 aa12.18□□□□□ -0.46
Bdnf-210ENSMUST00000111051 Stra8P70278 393 aa12.18□□□□□ -0.46
Bdnf-210ENSMUST00000111051 Crybg2B7ZCC2 1516 aa12.17□□□□□ -0.46
Bdnf-210ENSMUST00000111051 Csrnp3P59055 597 aa12.15□□□□□ -0.46
Bdnf-210ENSMUST00000111051 ScribQ80U72 1612 aa12.14□□□□□ -0.47
Bdnf-210ENSMUST00000111051 Ppargc1bQ8VHJ7 1014 aa12.13□□□□□ -0.47
Bdnf-210ENSMUST00000111051 Tnnt3Q9QZ47 272 aa12.13□□□□□ -0.47
Bdnf-210ENSMUST00000111051 Pelp1Q9DBD5 1123 aaKnown RBP12.13□□□□□ -0.47
Bdnf-210ENSMUST00000111051 Aplp2Q06335 707 aa12.12□□□□□ -0.47
Bdnf-210ENSMUST00000111051 Ube2uB1AUC4 352 aa12.12□□□□□ -0.47
Bdnf-210ENSMUST00000111051 Smarca2Q6DIC0 1577 aa12.08□□□□□ -0.48
Bdnf-210ENSMUST00000111051 Plekhg3Q4VAC9 1341 aa12.05□□□□□ -0.48
Bdnf-210ENSMUST00000111051 Il27Q8K3I6 234 aa12.05□□□□□ -0.48
Bdnf-210ENSMUST00000111051 Clip1Q922J3 1391 aa12.03□□□□□ -0.48
Bdnf-210ENSMUST00000111051 Ccdc88bQ4QRL3 1481 aa12.03□□□□□ -0.48
Bdnf-210ENSMUST00000111051 Ap3b1Q9Z1T1 1105 aa12.01□□□□□ -0.49
Bdnf-210ENSMUST00000111051 NclP09405 707 aaKnown RBP11.98□□□□□ -0.49
Bdnf-210ENSMUST00000111051 Aebp2Q9Z248 504 aaKnown RBP11.98□□□□□ -0.49
Bdnf-210ENSMUST00000111051 Fam50aQ9WV03 339 aaKnown RBP11.97□□□□□ -0.49
Bdnf-210ENSMUST00000111051 Sycp2Q9CUU3 1500 aa11.95□□□□□ -0.5
Bdnf-210ENSMUST00000111051 Eid3Q3V124 375 aa11.87□□□□□ -0.51
Bdnf-210ENSMUST00000111051 Slc24a1Q91WD8 1130 aa11.87□□□□□ -0.51
Bdnf-210ENSMUST00000111051 PrkcshO08795 521 aa11.86□□□□□ -0.51
Bdnf-210ENSMUST00000111051 Cecr2E9Q2Z1 1453 aa11.85□□□□□ -0.51
Bdnf-210ENSMUST00000111051 CftrP26361 1476 aa11.83□□□□□ -0.52
Bdnf-210ENSMUST00000111051 Cep162Q6ZQ06 1403 aa11.81□□□□□ -0.52
Bdnf-210ENSMUST00000111051 Fmn1Q05860 1466 aa11.8□□□□□ -0.52
Bdnf-210ENSMUST00000111051 Synj1Q8CHC4 1574 aa11.79□□□□□ -0.52
Bdnf-210ENSMUST00000111051 Gm38655A0A286YDK6 273 aa11.78□□□□□ -0.52
Bdnf-210ENSMUST00000111051 Ccer2J3QPU5 274 aa11.78□□□□□ -0.52
Bdnf-210ENSMUST00000111051 Anp32aO35381 247 aa11.77□□□□□ -0.52
Bdnf-210ENSMUST00000111051 Rtl5Q5DTT4 599 aa11.77□□□□□ -0.53
Bdnf-210ENSMUST00000111051 Lmod2Q3UHZ5 550 aa11.77□□□□□ -0.53
Bdnf-210ENSMUST00000111051 NrdcQ8BHG1 1161 aa11.75□□□□□ -0.53
Bdnf-210ENSMUST00000111051 Setd5Q5XJV7 1441 aa11.75□□□□□ -0.53
Bdnf-210ENSMUST00000111051 Eea1Q8BL66 1411 aa11.75□□□□□ -0.53
Bdnf-210ENSMUST00000111051 Rapgef2Q8CHG7 1496 aa11.72□□□□□ -0.53
Bdnf-210ENSMUST00000111051 Mapk8ip2Q9ERE9 830 aa11.71□□□□□ -0.53
Bdnf-210ENSMUST00000111051 Npm1Q61937 292 aaKnown RBP11.71□□□□□ -0.54
Bdnf-210ENSMUST00000111051 BlmO88700 1416 aa11.7□□□□□ -0.54
Bdnf-210ENSMUST00000111051 Fam71e1A1L3C1 212 aa11.67□□□□□ -0.54
Bdnf-210ENSMUST00000111051 Eif5bQ05D44 1216 aaKnown RBP11.67□□□□□ -0.54
Bdnf-210ENSMUST00000111051 Cttnbp2B9EJA2 1648 aa11.64□□□□□ -0.55
Bdnf-210ENSMUST00000111051 Calr4Q3TQS0 420 aa11.61□□□□□ -0.55
Bdnf-210ENSMUST00000111051 Anp32bQ9EST5 272 aaKnown RBP11.58□□□□□ -0.55
Bdnf-210ENSMUST00000111051 Kif15Q6P9L6 1387 aa11.58□□□□□ -0.56
Bdnf-210ENSMUST00000111051 Hnrnpul2Q00PI9 745 aaKnown RBP11.57□□□□□ -0.56
Bdnf-210ENSMUST00000111051 Smarca4Q3TKT4 1613 aaKnown RBP11.57□□□□□ -0.56
Bdnf-210ENSMUST00000111051 Ifnlr1Q8CGK5 535 aa11.56□□□□□ -0.56
Bdnf-210ENSMUST00000111051 Ccdc18Q640L5 1455 aa11.56□□□□□ -0.56
Bdnf-210ENSMUST00000111051 Top2aQ01320 1528 aaKnown RBP11.52□□□□□ -0.57
Retrieved 100 of 22,080 RNA–protein pairs in 17.1 ms