RNA–Protein interactions for RNA: ENSMUST00000034713.8

Ldlr-201, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,627 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-201ENSMUST00000034713 Tpsg1Q9QUL7 311 aa7.96□□□□□ -1.14
Ldlr-201ENSMUST00000034713 Ighv1-81A0A075B5Y4 117 aa7.95□□□□□ -1.14
Ldlr-201ENSMUST00000034713 MsmpB1AWI6 139 aa7.95□□□□□ -1.14
Ldlr-201ENSMUST00000034713 Defa1P11477 93 aa7.95□□□□□ -1.14
Ldlr-201ENSMUST00000034713 IappP12968 93 aa7.95□□□□□ -1.14
Ldlr-201ENSMUST00000034713 MdfiP70331 251 aa7.95□□□□□ -1.14
Ldlr-201ENSMUST00000034713 Defa20Q45VN2 95 aa7.95□□□□□ -1.14
Ldlr-201ENSMUST00000034713 Cd33Q63994 403 aa7.95□□□□□ -1.14
Ldlr-201ENSMUST00000034713 Ly6g5bQ8K1T4 194 aa7.95□□□□□ -1.14
Ldlr-201ENSMUST00000034713 Olfr1323Q8VF35 309 aa7.95□□□□□ -1.14
Ldlr-201ENSMUST00000034713 Sp5Q9JHX2 398 aa7.95□□□□□ -1.14
Ldlr-201ENSMUST00000034713 GlrxQ9QUH0 107 aa7.95□□□□□ -1.14
Ldlr-201ENSMUST00000034713 Trav6-6A0A075B603 114 aa7.95□□□□□ -1.14
Ldlr-201ENSMUST00000034713 Reg1P43137 165 aa7.95□□□□□ -1.14
Ldlr-201ENSMUST00000034713 4930544G11RikQ9CR99 193 aa7.95□□□□□ -1.14
Ldlr-201ENSMUST00000034713 Pgpep1Q9ESW8 209 aa7.95□□□□□ -1.14
Ldlr-201ENSMUST00000034713 Ighv3-4A0A0A6YXF1 117 aa7.95□□□□□ -1.14
Ldlr-201ENSMUST00000034713 Gm11444F6QMA6 170 aa7.95□□□□□ -1.14
Ldlr-201ENSMUST00000034713 Gpr82Q8BZR0 328 aa7.95□□□□□ -1.14
Ldlr-201ENSMUST00000034713 Olfr1199Q8VF94 310 aa7.95□□□□□ -1.14
Ldlr-201ENSMUST00000034713 Mcrip2Q9CQB2 160 aaKnown RBP7.95□□□□□ -1.14
Ldlr-201ENSMUST00000034713 Dido1Q8C9B9 2256 aaKnown RBP7.95□□□□□ -1.14
Ldlr-201ENSMUST00000034713 Mtatp8P03930 67 aa7.94□□□□□ -1.14
Ldlr-201ENSMUST00000034713 Chac1Q8R3J5 223 aa7.94□□□□□ -1.14
Ldlr-201ENSMUST00000034713 Scgb1b2O35176 93 aa7.94□□□□□ -1.14
Ldlr-201ENSMUST00000034713 P01789 122 aa7.94□□□□□ -1.14
Ldlr-201ENSMUST00000034713 Ighv3-6P18531 116 aa7.94□□□□□ -1.14
Ldlr-201ENSMUST00000034713 LoxP28301 411 aa7.94□□□□□ -1.14
Ldlr-201ENSMUST00000034713 AmelxP63277 210 aa7.94□□□□□ -1.14
Ldlr-201ENSMUST00000034713 Olfr477Q8VGI6 310 aa7.94□□□□□ -1.14
Ldlr-201ENSMUST00000034713 Tomm6Q9CQN3 74 aa7.94□□□□□ -1.14
Ldlr-201ENSMUST00000034713 Immp1lQ9CQU8 166 aa7.94□□□□□ -1.14
Ldlr-201ENSMUST00000034713 Gm28269A0A087WSG3 125 aa7.94□□□□□ -1.14
Ldlr-201ENSMUST00000034713 Gm21370Q3T9V6 190 aa7.94□□□□□ -1.14
Ldlr-201ENSMUST00000034713 P04219 140 aa7.94□□□□□ -1.14
Ldlr-201ENSMUST00000034713 Ssbp2Q9CYZ8 361 aa7.94□□□□□ -1.14
Ldlr-201ENSMUST00000034713 Ighv1-22A0A075B5U7 117 aa7.93□□□□□ -1.14
Ldlr-201ENSMUST00000034713 Ighv1-31A0A0A6YWK5 117 aa7.93□□□□□ -1.14
Ldlr-201ENSMUST00000034713 Zfp36l1P23950 338 aa7.93□□□□□ -1.14
Ldlr-201ENSMUST00000034713 Msrb3Q8BU85 253 aa7.93□□□□□ -1.14
Ldlr-201ENSMUST00000034713 Fbxl15Q91W61 300 aa7.93□□□□□ -1.14
Ldlr-201ENSMUST00000034713 Arhgap21Q6DFV3 1944 aa7.93□□□□□ -1.14
Ldlr-201ENSMUST00000034713 Defa-rs2P17534 91 aa7.93□□□□□ -1.14
Ldlr-201ENSMUST00000034713 Usmg5Q78IK2 58 aa7.93□□□□□ -1.14
Ldlr-201ENSMUST00000034713 Gemin7Q9CWY4 129 aa7.93□□□□□ -1.14
Ldlr-201ENSMUST00000034713 8030423J24RikQ9CX45 142 aa7.93□□□□□ -1.14
Ldlr-201ENSMUST00000034713 Nat8b-psE0CYC6 232 aa7.93□□□□□ -1.14
Ldlr-201ENSMUST00000034713 Tex26Q0VB26 296 aa7.93□□□□□ -1.14
Ldlr-201ENSMUST00000034713 Tm2d1Q99MB3 208 aa7.93□□□□□ -1.14
Ldlr-201ENSMUST00000034713 Gkn1Q9CR36 201 aa7.93□□□□□ -1.14
Ldlr-201ENSMUST00000034713 SNORCQ9CXL7 121 aa7.93□□□□□ -1.14
Ldlr-201ENSMUST00000034713 Mki67E9PVX6 3177 aaKnown RBP7.93□□□□□ -1.14
Ldlr-201ENSMUST00000034713 Wfdc9Q3UW41 83 aa7.93□□□□□ -1.14
Ldlr-201ENSMUST00000034713 Ighv5-8A0A075B676 92 aa7.92□□□□□ -1.14
Ldlr-201ENSMUST00000034713 Ear14F6YUX7 155 aa7.92□□□□□ -1.14
Ldlr-201ENSMUST00000034713 Ly86O88188 162 aa7.92□□□□□ -1.14
Ldlr-201ENSMUST00000034713 P04940 107 aa7.92□□□□□ -1.14
Ldlr-201ENSMUST00000034713 P04941 107 aa7.92□□□□□ -1.14
Ldlr-201ENSMUST00000034713 Ly6c1P0CW02 131 aa7.92□□□□□ -1.14
Ldlr-201ENSMUST00000034713 Trav7-2Q5R1I3 112 aa7.92□□□□□ -1.14
Ldlr-201ENSMUST00000034713 Trav9-1A0A075B601 112 aa7.92□□□□□ -1.14
Ldlr-201ENSMUST00000034713 Gm10521E9PZK0 135 aa7.92□□□□□ -1.14
Ldlr-201ENSMUST00000034713 Tcrg-C3L7N479 172 aa7.92□□□□□ -1.14
Ldlr-201ENSMUST00000034713 P01724 129 aa7.92□□□□□ -1.14
Ldlr-201ENSMUST00000034713 P03985 172 aa7.92□□□□□ -1.14
Ldlr-201ENSMUST00000034713 Pla2g2aP31482 146 aa7.92□□□□□ -1.14
Ldlr-201ENSMUST00000034713 A230072I06RikQ3UUJ8 172 aa7.92□□□□□ -1.14
Ldlr-201ENSMUST00000034713 Shisa9Q9CZN4 424 aa7.92□□□□□ -1.14
Ldlr-201ENSMUST00000034713 Trav14-2A0A075B694 121 aa7.92□□□□□ -1.14
Ldlr-201ENSMUST00000034713 Ighv1-69A0A0G2JFS5 117 aa7.92□□□□□ -1.14
Ldlr-201ENSMUST00000034713 Loxl1P97873 607 aa7.92□□□□□ -1.14
Ldlr-201ENSMUST00000034713 Lrcol1Q3URS3 161 aa7.92□□□□□ -1.14
Ldlr-201ENSMUST00000034713 Stpg1Q9D2F5 341 aa7.92□□□□□ -1.14
Ldlr-201ENSMUST00000034713 Gm12845A0A0N4SUM5 588 aa7.91□□□□□ -1.14
Ldlr-201ENSMUST00000034713 Nsun4C4P6S0 806 aaKnown RBP7.91□□□□□ -1.14
Ldlr-201ENSMUST00000034713 P01792 123 aa7.91□□□□□ -1.14
Ldlr-201ENSMUST00000034713 Klhdc3Q8VEM9 382 aa7.91□□□□□ -1.14
Ldlr-201ENSMUST00000034713 Gm2174F6ZVF2 133 aa7.91□□□□□ -1.14
Ldlr-201ENSMUST00000034713 Wt1P22561 449 aa7.91□□□□□ -1.14
Ldlr-201ENSMUST00000034713 H2-DMb1P35737 261 aa7.91□□□□□ -1.14
Ldlr-201ENSMUST00000034713 Pygo2Q80V76 405 aa7.91□□□□□ -1.14
Ldlr-201ENSMUST00000034713 Ighv1-39A0A075B5V5 117 aa7.91□□□□□ -1.14
Ldlr-201ENSMUST00000034713 Gm28778A0A087WSK7 233 aa7.91□□□□□ -1.14
Ldlr-201ENSMUST00000034713 Ighv1-16A0A075B5U1 98 aa7.91□□□□□ -1.14
Ldlr-201ENSMUST00000034713 Ndufa4Q62425 82 aaKnown RBP7.91□□□□□ -1.14
Ldlr-201ENSMUST00000034713 Gm9944Q8C559 102 aa7.91□□□□□ -1.14
Ldlr-201ENSMUST00000034713 AgrnA2ASQ1 1950 aa7.91□□□□□ -1.14
Ldlr-201ENSMUST00000034713 Trav4n-4A0A075B615 110 aa7.9□□□□□ -1.14
Ldlr-201ENSMUST00000034713 Trav14d-1A0A075B6B1 121 aa7.9□□□□□ -1.14
Ldlr-201ENSMUST00000034713 Gm5294J3QP53 216 aa7.9□□□□□ -1.14
Ldlr-201ENSMUST00000034713 Gm9573F7C950 1606 aa7.9□□□□□ -1.14
Ldlr-201ENSMUST00000034713 Trav6-4A0A075B6B4 115 aa7.9□□□□□ -1.14
Ldlr-201ENSMUST00000034713 CtsgP28293 261 aa7.9□□□□□ -1.14
Ldlr-201ENSMUST00000034713 Hist1h1tQ07133 208 aa7.9□□□□□ -1.14
Ldlr-201ENSMUST00000034713 Prss58Q8BW11 241 aa7.9□□□□□ -1.14
Ldlr-201ENSMUST00000034713 Fhl4Q8CDC8 279 aa7.9□□□□□ -1.14
Ldlr-201ENSMUST00000034713 Ighv14-1A0A075B5R4 117 aa7.9□□□□□ -1.15
Ldlr-201ENSMUST00000034713 Tcrg-C1A0A075B5Z0 172 aa7.9□□□□□ -1.15
Ldlr-201ENSMUST00000034713 Ighv1-23A0A0A6YVW3 117 aa7.9□□□□□ -1.15
Ldlr-201ENSMUST00000034713 P04942 107 aa7.9□□□□□ -1.15
Retrieved 100 of 22,080 RNA–protein pairs in 40 ms