RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 Trav8-1A0A075B641 109 aa9.08□□□□□ -0.96
Topbp1-201ENSMUST00000035164 BC107364E9Q5A2 140 aa9.08□□□□□ -0.96
Topbp1-201ENSMUST00000035164 Rpl13aP19253 203 aaKnown RBP9.08□□□□□ -0.96
Topbp1-201ENSMUST00000035164 Defb20Q30KP3 96 aa9.08□□□□□ -0.96
Topbp1-201ENSMUST00000035164 Gm12888Q3UW77 119 aa9.08□□□□□ -0.96
Topbp1-201ENSMUST00000035164 Slc25a39Q9D8K8 359 aa9.08□□□□□ -0.96
Topbp1-201ENSMUST00000035164 SetxA2AKX3 2646 aa9.08□□□□□ -0.96
Topbp1-201ENSMUST00000035164 Ash1lQ99MY8 2958 aa9.08□□□□□ -0.96
Topbp1-201ENSMUST00000035164 Sox21Q811W0 276 aa9.08□□□□□ -0.96
Topbp1-201ENSMUST00000035164 Bhlha15Q9QYC3 197 aa9.08□□□□□ -0.96
Topbp1-201ENSMUST00000035164 Slc25a20Q9Z2Z6 301 aaKnown RBP9.08□□□□□ -0.96
Topbp1-201ENSMUST00000035164 Ighv8-8A0A0A6YXQ0 119 aa9.07□□□□□ -0.96
Topbp1-201ENSMUST00000035164 BokO35425 213 aa9.07□□□□□ -0.96
Topbp1-201ENSMUST00000035164 Loxl1P97873 607 aa9.07□□□□□ -0.96
Topbp1-201ENSMUST00000035164 Ss18l1Q8BW22 402 aa9.07□□□□□ -0.96
Topbp1-201ENSMUST00000035164 Map1aQ9QYR6 2776 aa9.07□□□□□ -0.96
Topbp1-201ENSMUST00000035164 Igkv6-15A0A140T8M5 115 aa9.07□□□□□ -0.96
Topbp1-201ENSMUST00000035164 Tmem141A2AJB2 108 aa9.07□□□□□ -0.96
Topbp1-201ENSMUST00000035164 Dnajc30P59041 219 aa9.07□□□□□ -0.96
Topbp1-201ENSMUST00000035164 RhogP84096 191 aa9.07□□□□□ -0.96
Topbp1-201ENSMUST00000035164 Ndfip1Q8R0W6 221 aa9.07□□□□□ -0.96
Topbp1-201ENSMUST00000035164 Map1lc3aQ91VR7 121 aa9.07□□□□□ -0.96
Topbp1-201ENSMUST00000035164 Slamf6Q9ET39 351 aa9.07□□□□□ -0.96
Topbp1-201ENSMUST00000035164 Trav16nA0A075B634 117 aa9.07□□□□□ -0.96
Topbp1-201ENSMUST00000035164 Tmem238A9JSM3 176 aa9.07□□□□□ -0.96
Topbp1-201ENSMUST00000035164 Olfr235E9Q9Z6 312 aa9.07□□□□□ -0.96
Topbp1-201ENSMUST00000035164 Trav7-2Q5R1I3 112 aa9.07□□□□□ -0.96
Topbp1-201ENSMUST00000035164 Ighv1-39A0A075B5V5 117 aa9.07□□□□□ -0.96
Topbp1-201ENSMUST00000035164 P04946 108 aa9.07□□□□□ -0.96
Topbp1-201ENSMUST00000035164 Q08AU9 97 aa9.07□□□□□ -0.96
Topbp1-201ENSMUST00000035164 GaptQ8CB93 157 aa9.07□□□□□ -0.96
Topbp1-201ENSMUST00000035164 Gm20379A0A087WR34 119 aa9.06□□□□□ -0.96
Topbp1-201ENSMUST00000035164 Gm28269A0A087WSG3 125 aa9.06□□□□□ -0.96
Topbp1-201ENSMUST00000035164 Esp4A8R0T8 117 aa9.06□□□□□ -0.96
Topbp1-201ENSMUST00000035164 Khdc1aQ3UWR2 166 aa9.06□□□□□ -0.96
Topbp1-201ENSMUST00000035164 NpbQ8K4P1 119 aa9.06□□□□□ -0.96
Topbp1-201ENSMUST00000035164 Vmn1r62Q8R2C0 300 aa9.06□□□□□ -0.96
Topbp1-201ENSMUST00000035164 RpeQ8VEE0 228 aa9.06□□□□□ -0.96
Topbp1-201ENSMUST00000035164 Uqcrfs1Q9CR68 274 aa9.06□□□□□ -0.96
Topbp1-201ENSMUST00000035164 CstadQ9D245 104 aa9.06□□□□□ -0.96
Topbp1-201ENSMUST00000035164 Kiaa1549Q68FD9 1940 aa9.06□□□□□ -0.96
Topbp1-201ENSMUST00000035164 Trav4-4-dv10A0A075B651 110 aa9.06□□□□□ -0.96
Topbp1-201ENSMUST00000035164 Olfr1337A2ACY8 315 aa9.06□□□□□ -0.96
Topbp1-201ENSMUST00000035164 Gm5819E9PZ96 154 aa9.06□□□□□ -0.96
Topbp1-201ENSMUST00000035164 Rbms1Q91W59 403 aaKnown RBP9.06□□□□□ -0.96
Topbp1-201ENSMUST00000035164 Esp3J3QN49 87 aa9.06□□□□□ -0.96
Topbp1-201ENSMUST00000035164 Cd24P24807 76 aa9.06□□□□□ -0.96
Topbp1-201ENSMUST00000035164 Rbfox3Q8BIF2 374 aa9.06□□□□□ -0.96
Topbp1-201ENSMUST00000035164 Mrpl16Q99N93 251 aa9.06□□□□□ -0.96
Topbp1-201ENSMUST00000035164 Q9D727 114 aa9.06□□□□□ -0.96
Topbp1-201ENSMUST00000035164 Vmn1r63Q9EPT1 300 aa9.06□□□□□ -0.96
Topbp1-201ENSMUST00000035164 Gm6034E9Q101 117 aa9.06□□□□□ -0.96
Topbp1-201ENSMUST00000035164 Saa3P04918 122 aa9.06□□□□□ -0.96
Topbp1-201ENSMUST00000035164 Gm7489Q3UT34 171 aa9.06□□□□□ -0.96
Topbp1-201ENSMUST00000035164 Vsig8Q6P3A4 417 aa9.06□□□□□ -0.96
Topbp1-201ENSMUST00000035164 Gm10277Q6R5C6 214 aa9.06□□□□□ -0.96
Topbp1-201ENSMUST00000035164 Igkv14-130A0A0G2JF45 117 aa9.05□□□□□ -0.96
Topbp1-201ENSMUST00000035164 Gm28044L7N1X0 119 aa9.05□□□□□ -0.96
Topbp1-201ENSMUST00000035164 Sap30O88574 220 aa9.05□□□□□ -0.96
Topbp1-201ENSMUST00000035164 Tpsab1Q02844 273 aa9.05□□□□□ -0.96
Topbp1-201ENSMUST00000035164 Pkd1l2Q7TN88 2461 aa9.05□□□□□ -0.96
Topbp1-201ENSMUST00000035164 Lynx1P0DP60 116 aa9.05□□□□□ -0.96
Topbp1-201ENSMUST00000035164 TbpP29037 316 aa9.05□□□□□ -0.96
Topbp1-201ENSMUST00000035164 Insig2Q91WG1 225 aa9.05□□□□□ -0.96
Topbp1-201ENSMUST00000035164 Itgb1bp1O35671 200 aa9.05□□□□□ -0.96
Topbp1-201ENSMUST00000035164 Hoxb2P0C1T1 354 aa9.05□□□□□ -0.96
Topbp1-201ENSMUST00000035164 Gata3P23772 443 aa9.05□□□□□ -0.96
Topbp1-201ENSMUST00000035164 Hint1P70349 126 aaKnown RBP9.05□□□□□ -0.96
Topbp1-201ENSMUST00000035164 Gm9949Q8C9F4 104 aa9.05□□□□□ -0.96
Topbp1-201ENSMUST00000035164 Fhl4Q8CDC8 279 aa9.05□□□□□ -0.96
Topbp1-201ENSMUST00000035164 Srd5a2Q99N99 254 aa9.05□□□□□ -0.96
Topbp1-201ENSMUST00000035164 P18526 117 aa9.04□□□□□ -0.96
Topbp1-201ENSMUST00000035164 Rasl11aQ6IMB1 242 aa9.04□□□□□ -0.96
Topbp1-201ENSMUST00000035164 Rbmxl2Q9DAE2 385 aaKnown RBP9.04□□□□□ -0.96
Topbp1-201ENSMUST00000035164 Osr1Q9WVG7 266 aa9.04□□□□□ -0.96
Topbp1-201ENSMUST00000035164 Rabac1Q9Z0S9 185 aa9.04□□□□□ -0.96
Topbp1-201ENSMUST00000035164 Tmem8bB1AWJ5 472 aa9.04□□□□□ -0.96
Topbp1-201ENSMUST00000035164 Smad7O35253 426 aa9.04□□□□□ -0.96
Topbp1-201ENSMUST00000035164 Gng4P50153 75 aa9.04□□□□□ -0.96
Topbp1-201ENSMUST00000035164 Tomm40Q9QYA2 361 aa9.04□□□□□ -0.96
Topbp1-201ENSMUST00000035164 Trbv14A0A140T8L9 115 aa9.04□□□□□ -0.96
Topbp1-201ENSMUST00000035164 Gm21370Q3T9V6 190 aa9.04□□□□□ -0.96
Topbp1-201ENSMUST00000035164 Tmem136Q3TYE7 245 aa9.04□□□□□ -0.96
Topbp1-201ENSMUST00000035164 YrdcQ3U5F4 280 aa9.04□□□□□ -0.96
Topbp1-201ENSMUST00000035164 Fam240aJ3QNP9 97 aa9.03□□□□□ -0.96
Topbp1-201ENSMUST00000035164 P04940 107 aa9.03□□□□□ -0.96
Topbp1-201ENSMUST00000035164 P04941 107 aa9.03□□□□□ -0.96
Topbp1-201ENSMUST00000035164 1700001C19RikQ8K168 210 aa9.03□□□□□ -0.96
Topbp1-201ENSMUST00000035164 Ighv1-22A0A075B5U7 117 aa9.03□□□□□ -0.96
Topbp1-201ENSMUST00000035164 KprpB2RUR4 657 aa9.03□□□□□ -0.96
Topbp1-201ENSMUST00000035164 Reg1P43137 165 aa9.03□□□□□ -0.96
Topbp1-201ENSMUST00000035164 Foxc2Q61850 494 aa9.03□□□□□ -0.96
Topbp1-201ENSMUST00000035164 Arl6ip6Q8BH07 226 aa9.03□□□□□ -0.96
Topbp1-201ENSMUST00000035164 Gm5468Q8C3D3 155 aa9.03□□□□□ -0.96
Topbp1-201ENSMUST00000035164 Olfr177E9Q7W1 309 aa9.03□□□□□ -0.96
Topbp1-201ENSMUST00000035164 Tmem170bP86050 132 aa9.03□□□□□ -0.96
Topbp1-201ENSMUST00000035164 Znf691Q3TDE8 283 aa9.03□□□□□ -0.96
Topbp1-201ENSMUST00000035164 Zmat4Q8BZ94 229 aa9.03□□□□□ -0.96
Topbp1-201ENSMUST00000035164 Srsf9Q9D0B0 222 aaKnown RBP9.03□□□□□ -0.96
Topbp1-201ENSMUST00000035164 NpsP0C0P8 89 aa9.03□□□□□ -0.96
Retrieved 100 of 22,080 RNA–protein pairs in 125.3 ms