Protein–RNA interactions for Protein: Q811W0

Sox21, Transcription factor SOX-21, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox21Q811W0 Gm25239-201ENSMUST00000174915 86 ntBASIC31,08■■■□□ 2,57
Sox21Q811W0 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC28,79■■■□□ 2,2
Sox21Q811W0 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC28,31■■■□□ 2,12
Sox21Q811W0 Gm15042-201ENSMUST00000120212 883 ntBASIC27,06■■□□□ 1,92
Sox21Q811W0 Gm24109-201ENSMUST00000175489 103 ntBASIC26,97■■□□□ 1,91
Sox21Q811W0 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC26,59■■□□□ 1,85
Sox21Q811W0 Gm15045-201ENSMUST00000117359 883 ntBASIC26,49■■□□□ 1,83
Sox21Q811W0 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC26,25■■□□□ 1,79
Sox21Q811W0 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC26,2■■□□□ 1,78
Sox21Q811W0 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC26,08■■□□□ 1,77
Sox21Q811W0 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC25,98■■□□□ 1,75
Sox21Q811W0 Gm23366-201ENSMUST00000175022 89 ntBASIC25,87■■□□□ 1,73
Sox21Q811W0 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC25,8■■□□□ 1,72
Sox21Q811W0 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC25,67■■□□□ 1,7
Sox21Q811W0 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC25,26■■□□□ 1,63
Sox21Q811W0 AC153911.1-202ENSMUST00000218534 1034 ntBASIC25,22■■□□□ 1,63
Sox21Q811W0 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC25,14■■□□□ 1,62
Sox21Q811W0 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC25,06■■□□□ 1,6
Sox21Q811W0 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC25■■□□□ 1,59
Sox21Q811W0 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC24,99■■□□□ 1,59
Sox21Q811W0 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC24,97■■□□□ 1,59
Sox21Q811W0 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC24,9■■□□□ 1,58
Sox21Q811W0 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC24,88■■□□□ 1,57
Sox21Q811W0 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC24,77■■□□□ 1,56
Sox21Q811W0 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC24,73■■□□□ 1,55
Sox21Q811W0 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC24,71■■□□□ 1,55
Sox21Q811W0 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC24,67■■□□□ 1,54
Sox21Q811W0 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC24,62■■□□□ 1,53
Sox21Q811W0 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC24,6■■□□□ 1,53
Sox21Q811W0 Psd-208ENSMUST00000224556 2034 ntBASIC24,59■■□□□ 1,53
Sox21Q811W0 Gm25238-201ENSMUST00000174914 89 ntBASIC24,59■■□□□ 1,53
Sox21Q811W0 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC24,55■■□□□ 1,52
Sox21Q811W0 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC24,54■■□□□ 1,52
Sox21Q811W0 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC24,53■■□□□ 1,52
Sox21Q811W0 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC24,47■■□□□ 1,51
Sox21Q811W0 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC24,44■■□□□ 1,5
Sox21Q811W0 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC24,43■■□□□ 1,5
Sox21Q811W0 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC24,27■■□□□ 1,48
Sox21Q811W0 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC24,12■■□□□ 1,45
Sox21Q811W0 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC23,97■■□□□ 1,43
Sox21Q811W0 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC23,93■■□□□ 1,42
Sox21Q811W0 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC23,9■■□□□ 1,42
Sox21Q811W0 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC23,87■■□□□ 1,41
Sox21Q811W0 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC23,86■■□□□ 1,41
Sox21Q811W0 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC23,85■■□□□ 1,41
Sox21Q811W0 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC23,74■■□□□ 1,39
Sox21Q811W0 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC23,73■■□□□ 1,39
Sox21Q811W0 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC23,71■■□□□ 1,39
Sox21Q811W0 Gm27325-201ENSMUST00000175467 74 ntBASIC23,7■■□□□ 1,38
Sox21Q811W0 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC23,64■■□□□ 1,37
Sox21Q811W0 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC23,62■■□□□ 1,37
Sox21Q811W0 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC23,57■■□□□ 1,36
Sox21Q811W0 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC23,53■■□□□ 1,36
Sox21Q811W0 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC23,53■■□□□ 1,36
Sox21Q811W0 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC23,49■■□□□ 1,35
Sox21Q811W0 Gm25262-201ENSMUST00000174934 133 ntBASIC23,49■■□□□ 1,35
Sox21Q811W0 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC23,45■■□□□ 1,34
Sox21Q811W0 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC23,39■■□□□ 1,34
Sox21Q811W0 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC23,36■■□□□ 1,33
Sox21Q811W0 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC23,34■■□□□ 1,33
Sox21Q811W0 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC23,33■■□□□ 1,33
Sox21Q811W0 Rab21-202ENSMUST00000218831 843 ntBASIC23,27■■□□□ 1,32
Sox21Q811W0 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC23,22■■□□□ 1,31
Sox21Q811W0 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC23,18■■□□□ 1,3
Sox21Q811W0 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC23,17■■□□□ 1,3
Sox21Q811W0 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC23,17■■□□□ 1,3
Sox21Q811W0 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC23,16■■□□□ 1,3
Sox21Q811W0 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC23,15■■□□□ 1,3
Sox21Q811W0 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC23,13■■□□□ 1,29
Sox21Q811W0 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC23,12■■□□□ 1,29
Sox21Q811W0 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC23,11■■□□□ 1,29
Sox21Q811W0 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC23,1■■□□□ 1,29
Sox21Q811W0 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC23,1■■□□□ 1,29
Sox21Q811W0 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC23,1■■□□□ 1,29
Sox21Q811W0 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC23,05■■□□□ 1,28
Sox21Q811W0 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC23,04■■□□□ 1,28
Sox21Q811W0 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC23,03■■□□□ 1,28
Sox21Q811W0 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC23,01■■□□□ 1,27
Sox21Q811W0 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC23,01■■□□□ 1,27
Sox21Q811W0 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC22,98■■□□□ 1,27
Sox21Q811W0 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC22,96■■□□□ 1,27
Sox21Q811W0 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC22,94■■□□□ 1,26
Sox21Q811W0 Gm26115-201ENSMUST00000175605 87 ntBASIC22,92■■□□□ 1,26
Sox21Q811W0 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC22,9■■□□□ 1,26
Sox21Q811W0 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC22,88■■□□□ 1,25
Sox21Q811W0 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC22,88■■□□□ 1,25
Sox21Q811W0 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC22,88■■□□□ 1,25
Sox21Q811W0 Gm8109-201ENSMUST00000194076 746 ntBASIC22,87■■□□□ 1,25
Sox21Q811W0 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC22,86■■□□□ 1,25
Sox21Q811W0 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC22,85■■□□□ 1,25
Sox21Q811W0 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC22,85■■□□□ 1,25
Sox21Q811W0 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC22,84■■□□□ 1,25
Sox21Q811W0 Gm10524-201ENSMUST00000181931 1893 ntBASIC22,83■■□□□ 1,24
Sox21Q811W0 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC22,82■■□□□ 1,24
Sox21Q811W0 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC22,81■■□□□ 1,24
Sox21Q811W0 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC22,78■■□□□ 1,24
Sox21Q811W0 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC22,76■■□□□ 1,23
Sox21Q811W0 Gm42596-201ENSMUST00000196305 1958 ntBASIC22,72■■□□□ 1,23
Sox21Q811W0 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC22,71■■□□□ 1,23
Sox21Q811W0 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC22,71■■□□□ 1,23
Retrieved 100 of 76,532 protein–RNA pairs in 51,8 ms