Protein–RNA interactions for Protein: Q8R0W6

Ndfip1, NEDD4 family-interacting protein 1, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndfip1Q8R0W6 Gm25239-201ENSMUST00000174915 86 ntBASIC26.9■■□□□ 1.9
Ndfip1Q8R0W6 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Ndfip1Q8R0W6 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Ndfip1Q8R0W6 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC25.58■■□□□ 1.69
Ndfip1Q8R0W6 Psd-208ENSMUST00000224556 2034 ntBASIC24.68■■□□□ 1.54
Ndfip1Q8R0W6 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Ndfip1Q8R0W6 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Ndfip1Q8R0W6 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Ndfip1Q8R0W6 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Ndfip1Q8R0W6 Gm15042-201ENSMUST00000120212 883 ntBASIC24.21■■□□□ 1.47
Ndfip1Q8R0W6 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
Ndfip1Q8R0W6 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Ndfip1Q8R0W6 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Ndfip1Q8R0W6 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Ndfip1Q8R0W6 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC23.77■■□□□ 1.4
Ndfip1Q8R0W6 Gm15045-201ENSMUST00000117359 883 ntBASIC23.7■■□□□ 1.38
Ndfip1Q8R0W6 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Ndfip1Q8R0W6 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Ndfip1Q8R0W6 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.34
Ndfip1Q8R0W6 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Ndfip1Q8R0W6 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Ndfip1Q8R0W6 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Ndfip1Q8R0W6 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Ndfip1Q8R0W6 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
Ndfip1Q8R0W6 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Ndfip1Q8R0W6 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.29
Ndfip1Q8R0W6 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC23.06■■□□□ 1.28
Ndfip1Q8R0W6 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Ndfip1Q8R0W6 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Ndfip1Q8R0W6 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC22.97■■□□□ 1.27
Ndfip1Q8R0W6 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Ndfip1Q8R0W6 Gm24109-201ENSMUST00000175489 103 ntBASIC22.95■■□□□ 1.26
Ndfip1Q8R0W6 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Ndfip1Q8R0W6 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC22.78■■□□□ 1.24
Ndfip1Q8R0W6 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Ndfip1Q8R0W6 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Ndfip1Q8R0W6 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC22.71■■□□□ 1.23
Ndfip1Q8R0W6 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
Ndfip1Q8R0W6 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Ndfip1Q8R0W6 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC22.64■■□□□ 1.22
Ndfip1Q8R0W6 Gm23366-201ENSMUST00000175022 89 ntBASIC22.63■■□□□ 1.21
Ndfip1Q8R0W6 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC22.62■■□□□ 1.21
Ndfip1Q8R0W6 Gm10524-201ENSMUST00000181931 1893 ntBASIC22.6■■□□□ 1.21
Ndfip1Q8R0W6 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
Ndfip1Q8R0W6 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Ndfip1Q8R0W6 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Ndfip1Q8R0W6 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Ndfip1Q8R0W6 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Ndfip1Q8R0W6 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Ndfip1Q8R0W6 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Ndfip1Q8R0W6 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Ndfip1Q8R0W6 AC153911.1-202ENSMUST00000218534 1034 ntBASIC22.22■■□□□ 1.15
Ndfip1Q8R0W6 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
Ndfip1Q8R0W6 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Ndfip1Q8R0W6 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Ndfip1Q8R0W6 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Ndfip1Q8R0W6 Gm42596-201ENSMUST00000196305 1958 ntBASIC22.07■■□□□ 1.12
Ndfip1Q8R0W6 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC22.06■■□□□ 1.12
Ndfip1Q8R0W6 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC22.06■■□□□ 1.12
Ndfip1Q8R0W6 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Ndfip1Q8R0W6 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Ndfip1Q8R0W6 CT025624.2-201ENSMUST00000223609 1909 ntBASIC21.98■■□□□ 1.11
Ndfip1Q8R0W6 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Ndfip1Q8R0W6 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Ndfip1Q8R0W6 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ndfip1Q8R0W6 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Ndfip1Q8R0W6 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
Ndfip1Q8R0W6 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ndfip1Q8R0W6 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Ndfip1Q8R0W6 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ndfip1Q8R0W6 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ndfip1Q8R0W6 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Ndfip1Q8R0W6 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ndfip1Q8R0W6 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ndfip1Q8R0W6 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ndfip1Q8R0W6 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ndfip1Q8R0W6 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
Ndfip1Q8R0W6 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ndfip1Q8R0W6 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC21.63■■□□□ 1.05
Ndfip1Q8R0W6 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ndfip1Q8R0W6 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Ndfip1Q8R0W6 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC21.46■■□□□ 1.03
Ndfip1Q8R0W6 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ndfip1Q8R0W6 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ndfip1Q8R0W6 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ndfip1Q8R0W6 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ndfip1Q8R0W6 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ndfip1Q8R0W6 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ndfip1Q8R0W6 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ndfip1Q8R0W6 Gm27325-201ENSMUST00000175467 74 ntBASIC21.3■■□□□ 1
Ndfip1Q8R0W6 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ndfip1Q8R0W6 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC21.28■■□□□ 1
Ndfip1Q8R0W6 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC21.27■■□□□ 1
Ndfip1Q8R0W6 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Ndfip1Q8R0W6 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ndfip1Q8R0W6 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ndfip1Q8R0W6 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ndfip1Q8R0W6 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ndfip1Q8R0W6 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ndfip1Q8R0W6 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC21.17■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms