RNA–Protein interactions for RNA: ENSMUST00000066432.11

Scn3a-201, Transcript of Sodium channel protein, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Scn3a, Length 9,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3a-201ENSMUST00000066432 Gm37988J3QM41 62 aa5.94□□□□□ -1.46
Scn3a-201ENSMUST00000066432 Dmrt3Q80WT2 476 aa5.94□□□□□ -1.46
Scn3a-201ENSMUST00000066432 Rnf114Q9ET26 229 aa5.94□□□□□ -1.46
Scn3a-201ENSMUST00000066432 Cbln3Q9JHG0 197 aa5.94□□□□□ -1.46
Scn3a-201ENSMUST00000066432 Cbln1Q9R171 193 aa5.94□□□□□ -1.46
Scn3a-201ENSMUST00000066432 Trav16d-dv11A0A075B617 117 aa5.94□□□□□ -1.46
Scn3a-201ENSMUST00000066432 Gm12830F6XVH0 157 aa5.94□□□□□ -1.46
Scn3a-201ENSMUST00000066432 Rspo3Q2TJ95 277 aa5.94□□□□□ -1.46
Scn3a-201ENSMUST00000066432 Snrnp40Q6PE01 358 aa5.94□□□□□ -1.46
Scn3a-201ENSMUST00000066432 AponG3X9D6 251 aa5.94□□□□□ -1.46
Scn3a-201ENSMUST00000066432 Gm16686Q3UMN9 131 aa5.94□□□□□ -1.46
Scn3a-201ENSMUST00000066432 Minos1Q7TNS2 76 aa5.94□□□□□ -1.46
Scn3a-201ENSMUST00000066432 Cdkn1aP39689 159 aa5.94□□□□□ -1.46
Scn3a-201ENSMUST00000066432 Gm10762Q9CZN6 115 aa5.94□□□□□ -1.46
Scn3a-201ENSMUST00000066432 Zfp462B1AWL2 2495 aaKnown RBP5.94□□□□□ -1.46
Scn3a-201ENSMUST00000066432 Trbv30A0A0B4J1P1 111 aa5.94□□□□□ -1.46
Scn3a-201ENSMUST00000066432 Pax1P09084 446 aa5.94□□□□□ -1.46
Scn3a-201ENSMUST00000066432 Igkv14-130A0A0G2JF45 117 aa5.94□□□□□ -1.46
Scn3a-201ENSMUST00000066432 Tcf21O35437 179 aa5.94□□□□□ -1.46
Scn3a-201ENSMUST00000066432 Hint1P70349 126 aaKnown RBP5.94□□□□□ -1.46
Scn3a-201ENSMUST00000066432 Ntf4Q80VU4 209 aa5.94□□□□□ -1.46
Scn3a-201ENSMUST00000066432 Fam216bQ8CC14 138 aa5.94□□□□□ -1.46
Scn3a-201ENSMUST00000066432 Znf22Q9ERU3 237 aa5.94□□□□□ -1.46
Scn3a-201ENSMUST00000066432 Dscaml1Q4VA61 2053 aa5.94□□□□□ -1.46
Scn3a-201ENSMUST00000066432 TroQ6DIC6 2087 aa5.94□□□□□ -1.46
Scn3a-201ENSMUST00000066432 Gm28778A0A087WSK7 233 aa5.93□□□□□ -1.46
Scn3a-201ENSMUST00000066432 Ube2d2bQ6ZWY6 147 aa5.93□□□□□ -1.46
Scn3a-201ENSMUST00000066432 Klhdc1Q80YG3 406 aa5.93□□□□□ -1.46
Scn3a-201ENSMUST00000066432 Mbnl3Q8R003 342 aaKnown RBP5.93□□□□□ -1.46
Scn3a-201ENSMUST00000066432 Gm26938S4R185 226 aa5.93□□□□□ -1.46
Scn3a-201ENSMUST00000066432 Ighv1-19A0A0A6YWX0 117 aa5.93□□□□□ -1.46
Scn3a-201ENSMUST00000066432 Ighv1-36A0A0A6YXT2 117 aa5.93□□□□□ -1.46
Scn3a-201ENSMUST00000066432 Foxa3P35584 353 aa5.93□□□□□ -1.46
Scn3a-201ENSMUST00000066432 Pkd1l2Q7TN88 2461 aa5.93□□□□□ -1.46
Scn3a-201ENSMUST00000066432 Klrd1O54707 179 aa5.93□□□□□ -1.46
Scn3a-201ENSMUST00000066432 Trav6-4A0A075B6B4 115 aa5.93□□□□□ -1.46
Scn3a-201ENSMUST00000066432 Klf14Q19A41 325 aa5.93□□□□□ -1.46
Scn3a-201ENSMUST00000066432 Gm45623A0A1B0GSF6 103 aa5.93□□□□□ -1.46
Scn3a-201ENSMUST00000066432 Tmem136Q3TYE7 245 aa5.93□□□□□ -1.46
Scn3a-201ENSMUST00000066432 Lyrm9Q3UN90 78 aa5.93□□□□□ -1.46
Scn3a-201ENSMUST00000066432 1700001C19RikQ8K168 210 aa5.93□□□□□ -1.46
Scn3a-201ENSMUST00000066432 Rnase2aQ8K196 155 aa5.93□□□□□ -1.46
Scn3a-201ENSMUST00000066432 Olfr33Q8VGX7 318 aa5.93□□□□□ -1.46
Scn3a-201ENSMUST00000066432 Gm20379A0A087WR34 119 aa5.93□□□□□ -1.46
Scn3a-201ENSMUST00000066432 Olfr748E9Q9Z0 307 aa5.93□□□□□ -1.46
Scn3a-201ENSMUST00000066432 Gpm6bP35803 328 aa5.93□□□□□ -1.46
Scn3a-201ENSMUST00000066432 Znf474Q6V5K9 347 aa5.93□□□□□ -1.46
Scn3a-201ENSMUST00000066432 EsdQ9R0P3 282 aa5.93□□□□□ -1.46
Scn3a-201ENSMUST00000066432 Olfr1381Q7TQT4 311 aa5.93□□□□□ -1.46
Scn3a-201ENSMUST00000066432 Dmrtc2Q8CGW9 370 aa5.93□□□□□ -1.46
Scn3a-201ENSMUST00000066432 Saa4P31532 130 aa5.93□□□□□ -1.46
Scn3a-201ENSMUST00000066432 Olfr433Q7TRV9 314 aa5.93□□□□□ -1.46
Scn3a-201ENSMUST00000066432 Tomm40Q9QYA2 361 aa5.93□□□□□ -1.46
Scn3a-201ENSMUST00000066432 Ighv6-4A0A0A6YX19 119 aa5.92□□□□□ -1.46
Scn3a-201ENSMUST00000066432 Gm21616B6ZB74 166 aa5.92□□□□□ -1.46
Scn3a-201ENSMUST00000066432 Saa3P04918 122 aa5.92□□□□□ -1.46
Scn3a-201ENSMUST00000066432 Ss18l2Q9D174 77 aa5.92□□□□□ -1.46
Scn3a-201ENSMUST00000066432 Gm4791J3QQ14 102 aa5.92□□□□□ -1.46
Scn3a-201ENSMUST00000066432 Pla2g5P97391 137 aa5.92□□□□□ -1.46
Scn3a-201ENSMUST00000066432 MycbQ6P8Z1 170 aa5.92□□□□□ -1.46
Scn3a-201ENSMUST00000066432 Tmem219Q9D123 240 aa5.92□□□□□ -1.46
Scn3a-201ENSMUST00000066432 TrrapQ80YV3 2565 aaKnown RBP5.92□□□□□ -1.46
Scn3a-201ENSMUST00000066432 Cypt3B1AY64 174 aa5.92□□□□□ -1.46
Scn3a-201ENSMUST00000066432 Nkx2-8O70584 235 aa5.92□□□□□ -1.46
Scn3a-201ENSMUST00000066432 ApelaP0DMC4 54 aa5.92□□□□□ -1.46
Scn3a-201ENSMUST00000066432 Znf319Q9ERR8 581 aa5.92□□□□□ -1.46
Scn3a-201ENSMUST00000066432 Ighv6-3A0A075B5T2 118 aa5.92□□□□□ -1.46
Scn3a-201ENSMUST00000066432 Gata3P23772 443 aa5.92□□□□□ -1.46
Scn3a-201ENSMUST00000066432 H2-DMb1P35737 261 aa5.92□□□□□ -1.46
Scn3a-201ENSMUST00000066432 Gm9945Q8BNZ3 91 aa5.92□□□□□ -1.46
Scn3a-201ENSMUST00000066432 5930422O12RikQ8C4Y4 123 aa5.92□□□□□ -1.46
Scn3a-201ENSMUST00000066432 P04219 140 aa5.92□□□□□ -1.46
Scn3a-201ENSMUST00000066432 Rpl36aP83882 106 aaKnown RBP5.92□□□□□ -1.46
Scn3a-201ENSMUST00000066432 Tpsab1Q02844 273 aa5.92□□□□□ -1.46
Scn3a-201ENSMUST00000066432 Olfr322Q5NCC8 327 aa5.92□□□□□ -1.46
Scn3a-201ENSMUST00000066432 Nrn1Q8CFV4 142 aa5.92□□□□□ -1.46
Scn3a-201ENSMUST00000066432 Hils1Q9QYL0 170 aa5.92□□□□□ -1.46
Scn3a-201ENSMUST00000066432 Hivep2Q3UHF7 2430 aa5.92□□□□□ -1.46
Scn3a-201ENSMUST00000066432 Igkv19-93A0A0G2JFZ3 115 aa5.91□□□□□ -1.46
Scn3a-201ENSMUST00000066432 Hbb-bsA8DUK4 147 aa5.91□□□□□ -1.46
Scn3a-201ENSMUST00000066432 Hbb-b1P02088 147 aa5.91□□□□□ -1.46
Scn3a-201ENSMUST00000066432 Defa-rs12P50716 91 aa5.91□□□□□ -1.46
Scn3a-201ENSMUST00000066432 Ubald1Q6P3B2 176 aa5.91□□□□□ -1.46
Scn3a-201ENSMUST00000066432 OtoglF7A4A7 2325 aa5.91□□□□□ -1.46
Scn3a-201ENSMUST00000066432 Igkv4-63A0A0G2JFU6 117 aa5.91□□□□□ -1.46
Scn3a-201ENSMUST00000066432 Vdac2Q60930 295 aaKnown RBP5.91□□□□□ -1.46
Scn3a-201ENSMUST00000066432 Obox1Q9D350 204 aa5.91□□□□□ -1.46
Scn3a-201ENSMUST00000066432 Hist1h2bmP10854 126 aa5.91□□□□□ -1.46
Scn3a-201ENSMUST00000066432 Asphd1Q2TA57 360 aa5.91□□□□□ -1.46
Scn3a-201ENSMUST00000066432 Hist1h2bhQ64478 126 aa5.91□□□□□ -1.46
Scn3a-201ENSMUST00000066432 Hist2h2bbQ64525 126 aa5.91□□□□□ -1.46
Scn3a-201ENSMUST00000066432 Jpt2Q6PGH2 190 aaKnown RBP5.91□□□□□ -1.46
Scn3a-201ENSMUST00000066432 Hist1h2bcQ6ZWY9 126 aaKnown RBP5.91□□□□□ -1.46
Scn3a-201ENSMUST00000066432 Tmem129Q8K304 362 aa5.91□□□□□ -1.46
Scn3a-201ENSMUST00000066432 Gnb1lQ9EQ15 326 aa5.91□□□□□ -1.46
Scn3a-201ENSMUST00000066432 Ighv1-23A0A0A6YVW3 117 aa5.91□□□□□ -1.46
Scn3a-201ENSMUST00000066432 Thy1P01831 162 aa5.91□□□□□ -1.46
Scn3a-201ENSMUST00000066432 P04940 107 aa5.91□□□□□ -1.46
Scn3a-201ENSMUST00000066432 P04941 107 aa5.91□□□□□ -1.46
Scn3a-201ENSMUST00000066432 SbpP15501 199 aa5.91□□□□□ -1.46
Retrieved 100 of 22,080 RNA–protein pairs in 135.3 ms