Protein–RNA interactions for Protein: O70584

Nkx2-8, Homeobox protein Nkx-2.8, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-8O70584 Gm25239-201ENSMUST00000174915 86 ntBASIC29.42■■■□□ 2.3
Nkx2-8O70584 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Nkx2-8O70584 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
Nkx2-8O70584 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Nkx2-8O70584 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC26.21■■□□□ 1.79
Nkx2-8O70584 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Nkx2-8O70584 Gm15042-201ENSMUST00000120212 883 ntBASIC25.87■■□□□ 1.73
Nkx2-8O70584 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Nkx2-8O70584 Psd-208ENSMUST00000224556 2034 ntBASIC25.63■■□□□ 1.69
Nkx2-8O70584 Gm24109-201ENSMUST00000175489 103 ntBASIC25.4■■□□□ 1.66
Nkx2-8O70584 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Nkx2-8O70584 Gm15045-201ENSMUST00000117359 883 ntBASIC25.3■■□□□ 1.64
Nkx2-8O70584 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Nkx2-8O70584 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC24.81■■□□□ 1.56
Nkx2-8O70584 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Nkx2-8O70584 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
Nkx2-8O70584 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
Nkx2-8O70584 Gm23366-201ENSMUST00000175022 89 ntBASIC24.6■■□□□ 1.53
Nkx2-8O70584 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Nkx2-8O70584 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Nkx2-8O70584 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Nkx2-8O70584 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
Nkx2-8O70584 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC24.25■■□□□ 1.47
Nkx2-8O70584 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC24.19■■□□□ 1.46
Nkx2-8O70584 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Nkx2-8O70584 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Nkx2-8O70584 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Nkx2-8O70584 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
Nkx2-8O70584 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Nkx2-8O70584 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Nkx2-8O70584 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC23.91■■□□□ 1.42
Nkx2-8O70584 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
Nkx2-8O70584 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Nkx2-8O70584 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
Nkx2-8O70584 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Nkx2-8O70584 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Nkx2-8O70584 AC153911.1-202ENSMUST00000218534 1034 ntBASIC23.75■■□□□ 1.39
Nkx2-8O70584 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC23.7■■□□□ 1.38
Nkx2-8O70584 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.37
Nkx2-8O70584 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
Nkx2-8O70584 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC23.51■■□□□ 1.35
Nkx2-8O70584 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
Nkx2-8O70584 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Nkx2-8O70584 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC23.37■■□□□ 1.33
Nkx2-8O70584 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC23.33■■□□□ 1.33
Nkx2-8O70584 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Nkx2-8O70584 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Nkx2-8O70584 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Nkx2-8O70584 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC23.26■■□□□ 1.31
Nkx2-8O70584 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Nkx2-8O70584 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Nkx2-8O70584 Gm25238-201ENSMUST00000174914 89 ntBASIC23.16■■□□□ 1.3
Nkx2-8O70584 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC23.15■■□□□ 1.3
Nkx2-8O70584 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC23.15■■□□□ 1.3
Nkx2-8O70584 Gm42596-201ENSMUST00000196305 1958 ntBASIC23.1■■□□□ 1.29
Nkx2-8O70584 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.29
Nkx2-8O70584 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Nkx2-8O70584 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
Nkx2-8O70584 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Nkx2-8O70584 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC22.92■■□□□ 1.26
Nkx2-8O70584 Gm10524-201ENSMUST00000181931 1893 ntBASIC22.92■■□□□ 1.26
Nkx2-8O70584 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Nkx2-8O70584 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Nkx2-8O70584 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC22.89■■□□□ 1.26
Nkx2-8O70584 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Nkx2-8O70584 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Nkx2-8O70584 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Nkx2-8O70584 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Nkx2-8O70584 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC22.74■■□□□ 1.23
Nkx2-8O70584 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC22.72■■□□□ 1.23
Nkx2-8O70584 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC22.7■■□□□ 1.23
Nkx2-8O70584 Gm27325-201ENSMUST00000175467 74 ntBASIC22.7■■□□□ 1.22
Nkx2-8O70584 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Nkx2-8O70584 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Nkx2-8O70584 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Nkx2-8O70584 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC22.53■■□□□ 1.2
Nkx2-8O70584 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC22.49■■□□□ 1.19
Nkx2-8O70584 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC22.48■■□□□ 1.19
Nkx2-8O70584 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC22.44■■□□□ 1.18
Nkx2-8O70584 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Nkx2-8O70584 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Nkx2-8O70584 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Nkx2-8O70584 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
Nkx2-8O70584 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC22.37■■□□□ 1.17
Nkx2-8O70584 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.17
Nkx2-8O70584 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Nkx2-8O70584 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Nkx2-8O70584 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Nkx2-8O70584 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
Nkx2-8O70584 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Nkx2-8O70584 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Nkx2-8O70584 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Nkx2-8O70584 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Nkx2-8O70584 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
Nkx2-8O70584 Rab21-202ENSMUST00000218831 843 ntBASIC22.19■■□□□ 1.14
Nkx2-8O70584 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Nkx2-8O70584 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
Nkx2-8O70584 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Nkx2-8O70584 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Nkx2-8O70584 Gm25262-201ENSMUST00000174934 133 ntBASIC22.13■■□□□ 1.13
Retrieved 100 of 76,532 protein–RNA pairs in 8.2 ms