Protein–RNA interactions for Protein: A0A0A6YXT2

Ighv1-36, Immunoglobulin heavy variable 1-36 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-36A0A0A6YXT2 Gm25239-201ENSMUST00000174915 86 ntBASIC28,91■■■□□ 2,22
Ighv1-36A0A0A6YXT2 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC28,16■■■□□ 2,1
Ighv1-36A0A0A6YXT2 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC27,27■■□□□ 1,96
Ighv1-36A0A0A6YXT2 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC27,19■■□□□ 1,94
Ighv1-36A0A0A6YXT2 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC26,44■■□□□ 1,82
Ighv1-36A0A0A6YXT2 Psd-208ENSMUST00000224556 2034 ntBASIC26,27■■□□□ 1,8
Ighv1-36A0A0A6YXT2 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC26,15■■□□□ 1,78
Ighv1-36A0A0A6YXT2 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC26,01■■□□□ 1,75
Ighv1-36A0A0A6YXT2 Gm15042-201ENSMUST00000120212 883 ntBASIC25,87■■□□□ 1,73
Ighv1-36A0A0A6YXT2 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC25,66■■□□□ 1,7
Ighv1-36A0A0A6YXT2 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC25,49■■□□□ 1,67
Ighv1-36A0A0A6YXT2 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC25,46■■□□□ 1,67
Ighv1-36A0A0A6YXT2 Gm15045-201ENSMUST00000117359 883 ntBASIC25,42■■□□□ 1,66
Ighv1-36A0A0A6YXT2 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC25,34■■□□□ 1,65
Ighv1-36A0A0A6YXT2 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC25,22■■□□□ 1,63
Ighv1-36A0A0A6YXT2 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC25,21■■□□□ 1,63
Ighv1-36A0A0A6YXT2 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC25,18■■□□□ 1,62
Ighv1-36A0A0A6YXT2 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC25,15■■□□□ 1,62
Ighv1-36A0A0A6YXT2 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC24,95■■□□□ 1,58
Ighv1-36A0A0A6YXT2 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC24,84■■□□□ 1,57
Ighv1-36A0A0A6YXT2 Gm24109-201ENSMUST00000175489 103 ntBASIC24,79■■□□□ 1,56
Ighv1-36A0A0A6YXT2 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC24,74■■□□□ 1,55
Ighv1-36A0A0A6YXT2 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC24,72■■□□□ 1,55
Ighv1-36A0A0A6YXT2 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC24,69■■□□□ 1,54
Ighv1-36A0A0A6YXT2 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC24,67■■□□□ 1,54
Ighv1-36A0A0A6YXT2 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC24,62■■□□□ 1,53
Ighv1-36A0A0A6YXT2 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC24,62■■□□□ 1,53
Ighv1-36A0A0A6YXT2 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC24,61■■□□□ 1,53
Ighv1-36A0A0A6YXT2 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC24,5■■□□□ 1,51
Ighv1-36A0A0A6YXT2 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC24,43■■□□□ 1,5
Ighv1-36A0A0A6YXT2 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC24,4■■□□□ 1,5
Ighv1-36A0A0A6YXT2 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC24,39■■□□□ 1,49
Ighv1-36A0A0A6YXT2 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC24,36■■□□□ 1,49
Ighv1-36A0A0A6YXT2 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC24,34■■□□□ 1,49
Ighv1-36A0A0A6YXT2 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC24,31■■□□□ 1,48
Ighv1-36A0A0A6YXT2 Gm23366-201ENSMUST00000175022 89 ntBASIC24,23■■□□□ 1,47
Ighv1-36A0A0A6YXT2 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC24,22■■□□□ 1,47
Ighv1-36A0A0A6YXT2 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC24,1■■□□□ 1,45
Ighv1-36A0A0A6YXT2 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC24,09■■□□□ 1,45
Ighv1-36A0A0A6YXT2 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC24,09■■□□□ 1,45
Ighv1-36A0A0A6YXT2 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC24,07■■□□□ 1,44
Ighv1-36A0A0A6YXT2 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC24,05■■□□□ 1,44
Ighv1-36A0A0A6YXT2 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC24,01■■□□□ 1,43
Ighv1-36A0A0A6YXT2 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC23,99■■□□□ 1,43
Ighv1-36A0A0A6YXT2 Gm10524-201ENSMUST00000181931 1893 ntBASIC23,94■■□□□ 1,42
Ighv1-36A0A0A6YXT2 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC23,92■■□□□ 1,42
Ighv1-36A0A0A6YXT2 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC23,87■■□□□ 1,41
Ighv1-36A0A0A6YXT2 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC23,81■■□□□ 1,4
Ighv1-36A0A0A6YXT2 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC23,76■■□□□ 1,39
Ighv1-36A0A0A6YXT2 AC153911.1-202ENSMUST00000218534 1034 ntBASIC23,75■■□□□ 1,39
Ighv1-36A0A0A6YXT2 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC23,62■■□□□ 1,37
Ighv1-36A0A0A6YXT2 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC23,5■■□□□ 1,35
Ighv1-36A0A0A6YXT2 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC23,48■■□□□ 1,35
Ighv1-36A0A0A6YXT2 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC23,46■■□□□ 1,35
Ighv1-36A0A0A6YXT2 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC23,41■■□□□ 1,34
Ighv1-36A0A0A6YXT2 CT025624.2-201ENSMUST00000223609 1909 ntBASIC23,35■■□□□ 1,33
Ighv1-36A0A0A6YXT2 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC23,34■■□□□ 1,33
Ighv1-36A0A0A6YXT2 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC23,29■■□□□ 1,32
Ighv1-36A0A0A6YXT2 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC23,26■■□□□ 1,31
Ighv1-36A0A0A6YXT2 Gm42596-201ENSMUST00000196305 1958 ntBASIC23,23■■□□□ 1,31
Ighv1-36A0A0A6YXT2 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC23,21■■□□□ 1,31
Ighv1-36A0A0A6YXT2 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC23,19■■□□□ 1,3
Ighv1-36A0A0A6YXT2 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC23,18■■□□□ 1,3
Ighv1-36A0A0A6YXT2 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC23,18■■□□□ 1,3
Ighv1-36A0A0A6YXT2 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC23,17■■□□□ 1,3
Ighv1-36A0A0A6YXT2 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC23,15■■□□□ 1,3
Ighv1-36A0A0A6YXT2 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC23,13■■□□□ 1,29
Ighv1-36A0A0A6YXT2 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC23,13■■□□□ 1,29
Ighv1-36A0A0A6YXT2 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC23,08■■□□□ 1,29
Ighv1-36A0A0A6YXT2 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC23,08■■□□□ 1,29
Ighv1-36A0A0A6YXT2 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC23,07■■□□□ 1,28
Ighv1-36A0A0A6YXT2 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC22,99■■□□□ 1,27
Ighv1-36A0A0A6YXT2 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC22,98■■□□□ 1,27
Ighv1-36A0A0A6YXT2 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC22,93■■□□□ 1,26
Ighv1-36A0A0A6YXT2 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC22,89■■□□□ 1,26
Ighv1-36A0A0A6YXT2 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC22,88■■□□□ 1,25
Ighv1-36A0A0A6YXT2 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC22,86■■□□□ 1,25
Ighv1-36A0A0A6YXT2 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC22,82■■□□□ 1,24
Ighv1-36A0A0A6YXT2 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC22,81■■□□□ 1,24
Ighv1-36A0A0A6YXT2 Gm27325-201ENSMUST00000175467 74 ntBASIC22,8■■□□□ 1,24
Ighv1-36A0A0A6YXT2 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC22,79■■□□□ 1,24
Ighv1-36A0A0A6YXT2 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC22,74■■□□□ 1,23
Ighv1-36A0A0A6YXT2 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC22,74■■□□□ 1,23
Ighv1-36A0A0A6YXT2 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC22,71■■□□□ 1,23
Ighv1-36A0A0A6YXT2 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC22,7■■□□□ 1,22
Ighv1-36A0A0A6YXT2 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC22,67■■□□□ 1,22
Ighv1-36A0A0A6YXT2 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC22,65■■□□□ 1,22
Ighv1-36A0A0A6YXT2 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC22,64■■□□□ 1,21
Ighv1-36A0A0A6YXT2 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC22,63■■□□□ 1,21
Ighv1-36A0A0A6YXT2 Gm25238-201ENSMUST00000174914 89 ntBASIC22,62■■□□□ 1,21
Ighv1-36A0A0A6YXT2 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC22,6■■□□□ 1,21
Ighv1-36A0A0A6YXT2 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC22,6■■□□□ 1,21
Ighv1-36A0A0A6YXT2 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC22,58■■□□□ 1,21
Ighv1-36A0A0A6YXT2 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC22,57■■□□□ 1,2
Ighv1-36A0A0A6YXT2 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC22,57■■□□□ 1,2
Ighv1-36A0A0A6YXT2 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC22,53■■□□□ 1,2
Ighv1-36A0A0A6YXT2 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC22,52■■□□□ 1,2
Ighv1-36A0A0A6YXT2 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC22,52■■□□□ 1,19
Ighv1-36A0A0A6YXT2 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC22,51■■□□□ 1,19
Ighv1-36A0A0A6YXT2 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC22,5■■□□□ 1,19
Retrieved 100 of 76,532 protein–RNA pairs in 10 ms