Protein–RNA interactions for Protein: Q8C4Y4

5930422O12Rik, RIKEN cDNA 5930422O12 gene, mousemouse

Predictions only

Length 123 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
5930422O12RikQ8C4Y4 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
5930422O12RikQ8C4Y4 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
5930422O12RikQ8C4Y4 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
5930422O12RikQ8C4Y4 Psd-208ENSMUST00000224556 2034 ntBASIC24.02■■□□□ 1.44
5930422O12RikQ8C4Y4 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
5930422O12RikQ8C4Y4 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
5930422O12RikQ8C4Y4 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC23.42■■□□□ 1.34
5930422O12RikQ8C4Y4 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
5930422O12RikQ8C4Y4 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
5930422O12RikQ8C4Y4 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
5930422O12RikQ8C4Y4 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
5930422O12RikQ8C4Y4 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
5930422O12RikQ8C4Y4 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
5930422O12RikQ8C4Y4 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
5930422O12RikQ8C4Y4 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
5930422O12RikQ8C4Y4 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC22.88■■□□□ 1.25
5930422O12RikQ8C4Y4 Gm42596-201ENSMUST00000196305 1958 ntBASIC22.64■■□□□ 1.21
5930422O12RikQ8C4Y4 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
5930422O12RikQ8C4Y4 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC22.57■■□□□ 1.2
5930422O12RikQ8C4Y4 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
5930422O12RikQ8C4Y4 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
5930422O12RikQ8C4Y4 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
5930422O12RikQ8C4Y4 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
5930422O12RikQ8C4Y4 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
5930422O12RikQ8C4Y4 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
5930422O12RikQ8C4Y4 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
5930422O12RikQ8C4Y4 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
5930422O12RikQ8C4Y4 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC22.26■■□□□ 1.15
5930422O12RikQ8C4Y4 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
5930422O12RikQ8C4Y4 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
5930422O12RikQ8C4Y4 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC22.09■■□□□ 1.13
5930422O12RikQ8C4Y4 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
5930422O12RikQ8C4Y4 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
5930422O12RikQ8C4Y4 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC21.81■■□□□ 1.08
5930422O12RikQ8C4Y4 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
5930422O12RikQ8C4Y4 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC21.74■■□□□ 1.07
5930422O12RikQ8C4Y4 Zxda-201ENSMUST00000117281 2621 ntBASIC21.71■■□□□ 1.07
5930422O12RikQ8C4Y4 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
5930422O12RikQ8C4Y4 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
5930422O12RikQ8C4Y4 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
5930422O12RikQ8C4Y4 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
5930422O12RikQ8C4Y4 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
5930422O12RikQ8C4Y4 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
5930422O12RikQ8C4Y4 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
5930422O12RikQ8C4Y4 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
5930422O12RikQ8C4Y4 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
5930422O12RikQ8C4Y4 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
5930422O12RikQ8C4Y4 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
5930422O12RikQ8C4Y4 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
5930422O12RikQ8C4Y4 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
5930422O12RikQ8C4Y4 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
5930422O12RikQ8C4Y4 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC21.3■■□□□ 1
5930422O12RikQ8C4Y4 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
5930422O12RikQ8C4Y4 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC21.2■□□□□ 0.99
5930422O12RikQ8C4Y4 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC21.18■□□□□ 0.98
5930422O12RikQ8C4Y4 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
5930422O12RikQ8C4Y4 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
5930422O12RikQ8C4Y4 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
5930422O12RikQ8C4Y4 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
5930422O12RikQ8C4Y4 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
5930422O12RikQ8C4Y4 Gm25239-201ENSMUST00000174915 86 ntBASIC21.09■□□□□ 0.97
5930422O12RikQ8C4Y4 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
5930422O12RikQ8C4Y4 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
5930422O12RikQ8C4Y4 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
5930422O12RikQ8C4Y4 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
5930422O12RikQ8C4Y4 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC21.01■□□□□ 0.95
5930422O12RikQ8C4Y4 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
5930422O12RikQ8C4Y4 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
5930422O12RikQ8C4Y4 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
5930422O12RikQ8C4Y4 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
5930422O12RikQ8C4Y4 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
5930422O12RikQ8C4Y4 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
5930422O12RikQ8C4Y4 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
5930422O12RikQ8C4Y4 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
5930422O12RikQ8C4Y4 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
5930422O12RikQ8C4Y4 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
5930422O12RikQ8C4Y4 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
5930422O12RikQ8C4Y4 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
5930422O12RikQ8C4Y4 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
5930422O12RikQ8C4Y4 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
5930422O12RikQ8C4Y4 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
5930422O12RikQ8C4Y4 AC153504.1-201ENSMUST00000218379 2290 ntBASIC20.66■□□□□ 0.9
5930422O12RikQ8C4Y4 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
5930422O12RikQ8C4Y4 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
5930422O12RikQ8C4Y4 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
5930422O12RikQ8C4Y4 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
5930422O12RikQ8C4Y4 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
5930422O12RikQ8C4Y4 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
5930422O12RikQ8C4Y4 Gm10524-201ENSMUST00000181931 1893 ntBASIC20.52■□□□□ 0.88
5930422O12RikQ8C4Y4 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
5930422O12RikQ8C4Y4 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
5930422O12RikQ8C4Y4 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
5930422O12RikQ8C4Y4 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
5930422O12RikQ8C4Y4 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
5930422O12RikQ8C4Y4 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
5930422O12RikQ8C4Y4 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC20.45■□□□□ 0.86
5930422O12RikQ8C4Y4 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
5930422O12RikQ8C4Y4 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
5930422O12RikQ8C4Y4 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
5930422O12RikQ8C4Y4 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms