RNA–Protein interactions for RNA: YOR066W

MSA1, Transcript of Activator of G1-specific transcription factors MBF and SBF, yeast

Gene MSA1, Length 1,890 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSA1	YOR066W	YAP1802	P53309	568 aa		4.61	□□□□□ -1.67
MSA1	YOR066W	MLH3	Q12083	715 aa		4.61	□□□□□ -1.67
MSA1	YOR066W	GUK1	P15454	187 aa	Known RBP	4.6	□□□□□ -1.67
MSA1	YOR066W	THR1	P17423	357 aa	Known RBP	4.6	□□□□□ -1.67
MSA1	YOR066W	HCM1	P25364	564 aa		4.6	□□□□□ -1.67
MSA1	YOR066W	FUB1	P25659	250 aa		4.6	□□□□□ -1.67
MSA1	YOR066W	HRR25	P29295	494 aa	Known RBP	4.6	□□□□□ -1.67
MSA1	YOR066W	PRE2	P30656	287 aa	Known RBP	4.6	□□□□□ -1.67
MSA1	YOR066W	RAD16	P31244	790 aa		4.6	□□□□□ -1.67
MSA1	YOR066W	DEF1	P35732	738 aa	Known RBP	4.6	□□□□□ -1.67
MSA1	YOR066W	AXL2	P38928	823 aa		4.6	□□□□□ -1.67
MSA1	YOR066W	AVT1	P47082	602 aa		4.6	□□□□□ -1.67
MSA1	YOR066W	YLR040C	Q07988	224 aa		4.6	□□□□□ -1.67
MSA1	YOR066W	RTP1	Q12751	981 aa		4.6	□□□□□ -1.67
MSA1	YOR066W	PPR1	P07272	904 aa	Predicted RBP	4.6	□□□□□ -1.67
MSA1	YOR066W	ABF1	P14164	731 aa		4.6	□□□□□ -1.67
MSA1	YOR066W	CAP1	P28495	268 aa	Known RBP	4.6	□□□□□ -1.67
MSA1	YOR066W	IMP2'	P32351	346 aa		4.6	□□□□□ -1.67
MSA1	YOR066W	SUL1	P38359	859 aa		4.6	□□□□□ -1.67
MSA1	YOR066W	TEL2	P53038	688 aa		4.6	□□□□□ -1.67
MSA1	YOR066W	MDM1	Q01846	1127 aa		4.6	□□□□□ -1.67
MSA1	YOR066W	EFR3	Q03653	782 aa	Known RBP	4.6	□□□□□ -1.67
MSA1	YOR066W	HOF1	Q05080	669 aa		4.6	□□□□□ -1.67
MSA1	YOR066W	NTO1	Q12311	748 aa		4.6	□□□□□ -1.67
MSA1	YOR066W	TEF4	P36008	412 aa	Known RBP	4.59	□□□□□ -1.67
MSA1	YOR066W	ELF1	P36053	145 aa		4.59	□□□□□ -1.67
MSA1	YOR066W	MRPL7	P36519	292 aa		4.59	□□□□□ -1.67
MSA1	YOR066W	IDS2	P46958	469 aa		4.59	□□□□□ -1.67
MSA1	YOR066W	CBK1	P53894	756 aa		4.59	□□□□□ -1.67
MSA1	YOR066W	YDL086W	Q07505	273 aa		4.59	□□□□□ -1.67
MSA1	YOR066W	USV1	Q12132	391 aa		4.59	□□□□□ -1.67
MSA1	YOR066W	VPS34	P22543	875 aa		4.58	□□□□□ -1.68
MSA1	YOR066W	MUD2	P36084	527 aa	Known RBP	4.58	□□□□□ -1.68
MSA1	YOR066W	YHR097C	P38809	366 aa	Known RBP	4.58	□□□□□ -1.68
MSA1	YOR066W	DPH1	P40487	425 aa	Known RBP	4.58	□□□□□ -1.68
MSA1	YOR066W	YPL108W	Q02872	168 aa	Predicted RBP	4.58	□□□□□ -1.68
MSA1	YOR066W	YSH1	Q06224	779 aa	Predicted RBP	4.58	□□□□□ -1.68
MSA1	YOR066W	SUL2	Q12325	893 aa		4.58	□□□□□ -1.68
MSA1	YOR066W	ENT1	Q12518	454 aa		4.58	□□□□□ -1.68
MSA1	YOR066W	INH1	P01097	85 aa		4.58	□□□□□ -1.68
MSA1	YOR066W	TPK1	P06244	397 aa		4.58	□□□□□ -1.68
MSA1	YOR066W	PET122	P10355	254 aa		4.58	□□□□□ -1.68
MSA1	YOR066W	CBF2	P32504	956 aa		4.58	□□□□□ -1.68
MSA1	YOR066W	CNS1	P33313	385 aa		4.58	□□□□□ -1.68
MSA1	YOR066W	ARB1	P40024	610 aa	Known RBP	4.58	□□□□□ -1.68
MSA1	YOR066W	YGR151C	P53287	111 aa		4.58	□□□□□ -1.68
MSA1	YOR066W	DIP5	P53388	608 aa		4.58	□□□□□ -1.68
MSA1	YOR066W	RIA1	P53893	1110 aa		4.58	□□□□□ -1.68
MSA1	YOR066W	COX17	Q12287	69 aa		4.58	□□□□□ -1.68
MSA1	YOR066W	FUM1	P08417	488 aa	Known RBP	4.57	□□□□□ -1.68
MSA1	YOR066W	CTS1	P29029	562 aa		4.57	□□□□□ -1.68
MSA1	YOR066W	SWC3	P31376	625 aa		4.57	□□□□□ -1.68
MSA1	YOR066W	PPS1	P38148	807 aa		4.57	□□□□□ -1.68
MSA1	YOR066W	PSP1	P50896	841 aa	Known RBP	4.57	□□□□□ -1.68
MSA1	YOR066W	ESF2	P53743	316 aa	Known RBP	4.57	□□□□□ -1.68
MSA1	YOR066W	YOL073C	Q08232	322 aa		4.57	□□□□□ -1.68
MSA1	YOR066W	MED1	Q12321	566 aa		4.57	□□□□□ -1.68
MSA1	YOR066W	SAN1	P22470	610 aa		4.56	□□□□□ -1.68
MSA1	YOR066W	MFT1	P33441	392 aa	Known RBP	4.56	□□□□□ -1.68
MSA1	YOR066W	APL3	P38065	1025 aa		4.56	□□□□□ -1.68
MSA1	YOR066W	NOP16	P40007	231 aa	Known RBP	4.56	□□□□□ -1.68
MSA1	YOR066W	NDE1	P40215	560 aa		4.56	□□□□□ -1.68
MSA1	YOR066W	USA1	Q03714	838 aa		4.56	□□□□□ -1.68
MSA1	YOR066W	SNO4	Q04902	237 aa		4.56	□□□□□ -1.68
MSA1	YOR066W	TSR2	Q06672	205 aa	Known RBP	4.56	□□□□□ -1.68
MSA1	YOR066W	HSP33	Q08914	237 aa	Known RBP	4.56	□□□□□ -1.68
MSA1	YOR066W	HSP32	Q08992	237 aa		4.56	□□□□□ -1.68
MSA1	YOR066W	PCD1	Q12524	340 aa		4.56	□□□□□ -1.68
MSA1	YOR066W	GCD7	P32502	381 aa	Predicted RBP	4.56	□□□□□ -1.68
MSA1	YOR066W	MPE1	P35728	441 aa	Known RBP	4.56	□□□□□ -1.68
MSA1	YOR066W	YEL068C	P39977	110 aa		4.56	□□□□□ -1.68
MSA1	YOR066W	RIC1	P40395	1056 aa		4.56	□□□□□ -1.68
MSA1	YOR066W	THI6	P41835	540 aa		4.56	□□□□□ -1.68
MSA1	YOR066W	SKP2	P42843	763 aa		4.56	□□□□□ -1.68
MSA1	YOR066W	ZAP1	P47043	880 aa		4.56	□□□□□ -1.68
MSA1	YOR066W	COG1	P53079	417 aa		4.56	□□□□□ -1.68
MSA1	YOR066W	NMA2	P53204	395 aa		4.56	□□□□□ -1.68
MSA1	YOR066W	ATG4	P53867	494 aa		4.56	□□□□□ -1.68
MSA1	YOR066W	SSL2	Q00578	843 aa		4.56	□□□□□ -1.68
MSA1	YOR066W	YCR061W	P25639	631 aa		4.55	□□□□□ -1.68
MSA1	YOR066W	PMI40	P29952	429 aa	Known RBP	4.55	□□□□□ -1.68
MSA1	YOR066W	PAH1	P32567	862 aa		4.55	□□□□□ -1.68
MSA1	YOR066W	SDH8	P38345	138 aa		4.55	□□□□□ -1.68
MSA1	YOR066W	KSP1	P38691	1029 aa	Known RBP	4.55	□□□□□ -1.68
MSA1	YOR066W	UPF3	P48412	387 aa	Known RBP	4.55	□□□□□ -1.68
MSA1	YOR066W	SNF12	P53628	566 aa		4.55	□□□□□ -1.68
MSA1	YOR066W	MFM1	Q02783	413 aa		4.55	□□□□□ -1.68
MSA1	YOR066W	UFO1	Q04511	668 aa		4.55	□□□□□ -1.68
MSA1	YOR066W	CRF1	Q04930	467 aa		4.55	□□□□□ -1.68
MSA1	YOR066W	VAM6	Q07468	1049 aa		4.55	□□□□□ -1.68
MSA1	YOR066W	NUP120	P35729	1037 aa		4.54	□□□□□ -1.68
MSA1	YOR066W	VPS8	P39702	1274 aa		4.54	□□□□□ -1.68
MSA1	YOR066W	IST3	P40565	148 aa	Predicted RBP	4.54	□□□□□ -1.68
MSA1	YOR066W	DAK1	P54838	584 aa	Known RBP	4.54	□□□□□ -1.68
MSA1	YOR066W	RKI1	Q12189	258 aa		4.54	□□□□□ -1.68
MSA1	YOR066W	ATP2	P00830	511 aa	Known RBP	4.54	□□□□□ -1.68
MSA1	YOR066W	AAC3	P18238	307 aa		4.54	□□□□□ -1.68
MSA1	YOR066W	JNM1	P36224	373 aa		4.54	□□□□□ -1.68
MSA1	YOR066W	UBP5	P39944	805 aa		4.54	□□□□□ -1.68
MSA1	YOR066W	TAM41	P53230	385 aa		4.54	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 29.6 ms